View source for EquCab2 conservation alignment

==see also==

<UL>
<LI>Horse 6-way [[EquCab2 Genome size statistics]]</LI>
<LI>Horse 6-way [[EquCab2 conservation lastz parameters]]</LI>
<LI>all other [[UCSC Multiple Alignments]]</LI>
</UL>

==do not edit==

This table is automatically generated off-line from the UCSC databases.  Please do not edit it.

<TABLE BORDER=1>
<TR>
  <TH>&nbsp;</TH>
  <TH>UCSC<BR>db&nbsp;name</TH>
  <TD>Scientific<BR>name</TD>
  <TD>Common<BR>name</TD>
  <TD>assembly<BR>date</TD>
  <TD>source<BR>version</TD>
  <TD>Repeat<BR>Masker</TD>
  <TD>Window<BR>Masker</TD>
  <TD>chain<BR>on&nbsp;equCab2</TD>
  <TD>%&nbsp;of&nbsp;equCab2<BR>matched<BR>(chainLink&nbsp;table)</TD>
</TR>
<TR>
  <TH>01</TH><TH>equCab2</TH><TD>Equus<BR>caballus</TD><TD>Horse</TD>
  <TD>Sep.&nbsp;2007&nbsp;(Broad/equCab2)</TD>
  <TD>Broad Institute EquCab2</TD>
  <TD ALIGN=RIGHT>2009-08-14</TD>
  <TD ALIGN=RIGHT>N/A</TD><TD>N/A</TD><TD ALIGN=RIGHT>N/A</TD>
</TR><TR>
  <TH>02</TH><TH>canFam2</TH><TD>Canis<BR>lupus<BR>familiaris</TD><TD>Dog</TD>
  <TD>May&nbsp;2005&nbsp;(Broad/canFam2)</TD>
  <TD>Broad Institute v. 2.0</TD>
  <TD ALIGN=RIGHT>2009-08-15</TD>
  <TD ALIGN=RIGHT>N/A</TD><TD>2009-09-02</TD><TD ALIGN=RIGHT>70.875%</TD>
</TR><TR>
  <TH>03</TH><TH>hg18</TH><TD>Homo<BR>sapiens</TD><TD>Human</TD>
  <TD>Mar.&nbsp;2006&nbsp;(NCBI36/hg18)</TD>
  <TD>NCBI Build 36.1</TD>
  <TD ALIGN=RIGHT>2009-08-14</TD>
  <TD ALIGN=RIGHT>2009-09-02</TD><TD>2009-09-02</TD><TD ALIGN=RIGHT>66.796%</TD>
</TR><TR>
  <TH>04</TH><TH>mm9</TH><TD>Mus<BR>musculus</TD><TD>Mouse</TD>
  <TD>July&nbsp;2007&nbsp;(NCBI37/mm9)</TD>
  <TD>NCBI Build 37</TD>
  <TD ALIGN=RIGHT>2009-08-14</TD>
  <TD ALIGN=RIGHT>N/A</TD><TD>2009-09-02</TD><TD ALIGN=RIGHT>37.150%</TD>
</TR><TR>
  <TH>05</TH><TH>ornAna1</TH><TD>Ornithorhynchus<BR>anatinus</TD><TD>Platypus</TD>
  <TD>Mar.&nbsp;2007&nbsp;(WUGSC&nbsp;5.0.1/ornAna1)</TD>
  <TD>WUSTL version 5.0.1</TD>
  <TD ALIGN=RIGHT>2009-08-15</TD>
  <TD ALIGN=RIGHT>N/A</TD><TD>2009-09-02</TD><TD ALIGN=RIGHT>5.466%</TD>
</TR><TR>
  <TH>06</TH><TH>galGal3</TH><TD>Gallus<BR>gallus</TD><TD>Chicken</TD>
  <TD>May&nbsp;2006&nbsp;(WUGSC&nbsp;2.1/galGal3)</TD>
  <TD>Chicken Genome Sequencing Consortium May 2006 release</TD>
  <TD ALIGN=RIGHT>2009-08-15</TD>
  <TD ALIGN=RIGHT>2007-01-02</TD><TD>2009-09-02</TD><TD ALIGN=RIGHT>3.019%</TD>
</TR>
</TABLE>