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| One of the robots that runs automatically during the [[CGI Build Process]], is the testSearch robot.
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| The code is kent/src/hg/qa/testSearch.c.
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| testSearch - test search functionality.
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| usage:
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| testSearch inputFile
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| The input format is:
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| <search term> <database> <count of expected results>
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| followed by a line for each of the expected results
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| Each expected result line looks like:
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| <tablename> <chrom> <chromStart> <chromEnd> <actual search match>
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| I keep an example in kent/src/hg/qa/search1.txt (and this is what the build robot uses):
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| NC_001807 hg18 1
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| ctgPos chrM 0 16571 NC_001807
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| AP006221.1 hg18 1
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| clonePos chr1 0 36744 AP006221.1
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| rs3 hg18 2
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| snp126 chr13 31344591 31345092 rs3
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| snp127 chr13 31344591 31345092 rs3
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| Since snp127 is only on hgwdev, this example only works there.
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| The HapMap SNPs examples need to be added.
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Latest revision as of 19:24, 10 March 2011
This page is no longer maintained.
