UCSC to RefSeq correspondence: Difference between revisions
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(with <span style="color:red";>(has dups)</span> indication) |
(now with near match and subsets) |
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| Line 32: | Line 32: | ||
! 1 | ! 1 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=CHM1 CHM1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=CHM1 CHM1] | ||
| mole | | mole | ||
| Homo sapiens hydatidiform mole assembly chm1 | | Homo sapiens hydatidiform mole assembly chm1 | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000306695.2/ GCF_000306695.2_CHM1_1.1] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000306695.2/ GCF_000306695.2_CHM1_1.1] | ||
| Line 46: | Line 46: | ||
! 3 | ! 3 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=balAcu1 balAcu1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=balAcu1 balAcu1] | ||
| Balaenoptera acutorostrata scammoni | | Balaenoptera acutorostrata scammoni | ||
| Minke whale | | Minke whale | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000493695.1/ GCF_000493695.1_BalAcu1.0] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000493695.1/ GCF_000493695.1_BalAcu1.0] | ||
| Line 81: | Line 81: | ||
! 8 | ! 8 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam3 canFam3] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam3 canFam3] | ||
| Canis lupus familiaris | | Canis lupus familiaris | ||
| Dog | | Dog | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002285.3/ GCF_000002285.3_CanFam3.1] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002285.3/ GCF_000002285.3_CanFam3.1] | ||
| Line 123: | Line 123: | ||
! 14 | ! 14 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colAng1 colAng1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colAng1 colAng1] | ||
| Colobus angolensis palliatus | | Colobus angolensis palliatus | ||
| Angolan colobus | | Angolan colobus | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000951035.1/ GCF_000951035.1_Cang.pa_1.0] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000951035.1/ GCF_000951035.1_Cang.pa_1.0] | ||
| Line 157: | Line 157: | ||
|- | |- | ||
! 19 | ! 19 | ||
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat5 felCat5](has dups) | | style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat5 felCat5] | ||
(has dups: 1) | |||
| Felis catus | | Felis catus | ||
| Cat | | Cat | ||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000181335.1/ GCF_000181335.1_Felis_catus-6.2](has dups) | | style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000181335.1/ GCF_000181335.1_Felis_catus-6.2] | ||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Felis_catus/all_assembly_versions/GCF_000181335.1_Felis_catus-6.2/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Felis_catus/all_assembly_versions/GCF_000181335.1_Felis_catus-6.2/ vertebrate_mammalian] | ||
|- | |- | ||
| Line 270: | Line 272: | ||
! 35 | ! 35 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryAfe1 oryAfe1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryAfe1 oryAfe1] | ||
| Orycteropus afer | | Orycteropus afer afer | ||
| Aardvark | | Aardvark | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000298275.1/ GCF_000298275.1_OryAfe1.0] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000298275.1/ GCF_000298275.1_OryAfe1.0] | ||
| Line 276: | Line 278: | ||
|- | |- | ||
! 36 | ! 36 | ||
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=otoGar3 otoGar3](has dups) | | style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=otoGar3 otoGar3] | ||
(has dups: 139) | |||
| Otolemur garnettii | | Otolemur garnettii | ||
| Bushbaby | | Bushbaby | ||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000181295.1/ GCF_000181295.1_OtoGar3](has dups) | | style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000181295.1/ GCF_000181295.1_OtoGar3] | ||
(has dups: 139) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Otolemur_garnettii/all_assembly_versions/GCF_000181295.1_OtoGar3/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Otolemur_garnettii/all_assembly_versions/GCF_000181295.1_OtoGar3/ vertebrate_mammalian] | ||
|- | |- | ||
| Line 312: | Line 316: | ||
! 41 | ! 41 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTig1 panTig1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTig1 panTig1] | ||
| Panthera tigris altaica | | Panthera tigris altaica | ||
| Amur tiger | | Amur tiger | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000464555.1/ GCF_000464555.1_PanTig1.0] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000464555.1/ GCF_000464555.1_PanTig1.0] | ||
| Line 340: | Line 344: | ||
! 45 | ! 45 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=perManBai1 perManBai1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=perManBai1 perManBai1] | ||
| Peromyscus maniculatus bairdii | | Peromyscus maniculatus bairdii | ||
| Prairie deer mouse | | Prairie deer mouse | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000500345.1/ GCF_000500345.1_Pman_1.0] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000500345.1/ GCF_000500345.1_Pman_1.0] | ||
| Line 389: | Line 393: | ||
! 52 | ! 52 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=speTri2 speTri2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=speTri2 speTri2] | ||
| Spermophilus | | Spermophilus tridecemlineatus | ||
| Squirrel | | Squirrel | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000236235.1/ GCF_000236235.1_SpeTri2.0] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000236235.1/ GCF_000236235.1_SpeTri2.0] | ||
| Line 403: | Line 407: | ||
! 54 | ! 54 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarSyr2 tarSyr2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarSyr2 tarSyr2] | ||
| Tarsius | | Tarsius syrichta | ||
| Tarsier | | Tarsier | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000164805.1/ GCF_000164805.1_Tarsius_syrichta-2.0.1] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000164805.1/ GCF_000164805.1_Tarsius_syrichta-2.0.1] | ||
| Line 417: | Line 421: | ||
! 56 | ! 56 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triMan1 triMan1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triMan1 triMan1] | ||
| Trichechus manatus latirostris | | Trichechus manatus latirostris | ||
| Manatee | | Manatee | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000243295.1/ GCF_000243295.1_TriManLat1.0] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000243295.1/ GCF_000243295.1_TriManLat1.0] | ||
| Line 437: | Line 441: | ||
|- | |- | ||
! 59 | ! 59 | ||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm10 mm10] | |||
(subset: 66 of 179) | |||
| Mus musculus | |||
| Mouse | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001635.22/ GCF_000001635.22_GRCm38.p2] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mus_musculus/all_assembly_versions/GCF_000001635.22_GRCm38.p2/ vertebrate_mammalian] | |||
|- | |||
! 60 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm10 mm10] | |||
(subset: 66 of 182) | |||
| Mus musculus | |||
| Mouse | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001635.23/ GCF_000001635.23_GRCm38.p3] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mus_musculus/all_assembly_versions/GCF_000001635.23_GRCm38.p3/ vertebrate_mammalian] | |||
|- | |||
! 61 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm10 mm10] | |||
(subset: 66 of 196) | |||
| Mus musculus | |||
| Mouse | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001635.24/ GCF_000001635.24_GRCm38.p4] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mus_musculus/all_assembly_versions/GCF_000001635.24_GRCm38.p4/ vertebrate_mammalian] | |||
|- | |||
! 62 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm10 mm10] | |||
(subset: 66 of 207) | |||
| Mus musculus | |||
| Mouse | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001635.25/ GCF_000001635.25_GRCm38.p5] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mus_musculus/all_assembly_versions/GCF_000001635.25_GRCm38.p5/ vertebrate_mammalian] | |||
|- | |||
! 63 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn6 rn6] | |||
(subset: 953 of 953) | |||
| Rattus norvegicus | |||
| Rat | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001895.5/ GCF_000001895.5_Rnor_6.0] | |||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Rattus_norvegicus/all_assembly_versions/GCF_000001895.5_Rnor_6.0/ vertebrate_mammalian] | |||
|- | |||
! 64 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor3 gorGor3] | |||
(subset: 46823 of 50196) | |||
| Gorilla gorilla gorilla | |||
| Gorilla | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000151905.1/ GCF_000151905.1_gorGor3.1] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Gorilla_gorilla/all_assembly_versions/GCF_000151905.1_gorGor3.1/ vertebrate_mammalian] | |||
|- | |||
! 65 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac2 vicPac2] | |||
(subset: 276611 of 276611) | |||
| Vicugna pacos | |||
| Alpaca | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000164845.1/ GCF_000164845.1_Vicugna_pacos-2.0.1] | |||
(has dups: 115) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Vicugna_pacos/all_assembly_versions/GCF_000164845.1_Vicugna_pacos-2.0.1/ vertebrate_mammalian] | |||
|- | |||
! 66 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=saiBol1 saiBol1] | |||
(subset: 2685 of 2686) | |||
| Saimiri boliviensis | |||
| Squirrel monkey | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000235385.1/ GCF_000235385.1_SaiBol1.0] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Saimiri_boliviensis/all_assembly_versions/GCF_000235385.1_SaiBol1.0/ vertebrate_mammalian] | |||
|- | |||
! 67 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=octDeg1 octDeg1] | |||
(subset: 7134 of 7134) | |||
| Octodon degus | |||
| Brush-tailed rat | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000260255.1/ GCF_000260255.1_OctDeg1.0] | |||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Octodon_degus/all_assembly_versions/GCF_000260255.1_OctDeg1.0/ vertebrate_mammalian] | |||
|- | |||
! 68 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=conCri1 conCri1] | |||
(subset: 2038 of 2038) | |||
| Condylura cristata | |||
| Star-nosed mole | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000260355.1/ GCF_000260355.1_ConCri1.0] | |||
(has dups: 2) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Condylura_cristata/all_assembly_versions/GCF_000260355.1_ConCri1.0/ vertebrate_mammalian] | |||
|- | |||
! 69 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chiLan1 chiLan1] | |||
(subset: 2838 of 2839) | |||
| Chinchilla lanigera | |||
| Chinchilla | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000276665.1/ GCF_000276665.1_ChiLan1.0] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Chinchilla_lanigera/all_assembly_versions/GCF_000276665.1_ChiLan1.0/ vertebrate_mammalian] | |||
|- | |||
! 70 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=jacJac1 jacJac1] | |||
(subset: 10896 of 10896) | |||
| Jaculus jaculus | |||
| Lesser Egyptian jerboa | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000280705.1/ GCF_000280705.1_JacJac1.0] | |||
(has dups: 2) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Jaculus_jaculus/all_assembly_versions/GCF_000280705.1_JacJac1.0/ vertebrate_mammalian] | |||
|- | |||
! 71 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri3 ochPri3] | |||
(subset: 10420 of 10420) | |||
| Ochotona princeps | |||
| Pika | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000292845.1/ GCF_000292845.1_OchPri3.0] | |||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ochotona_princeps/all_assembly_versions/GCF_000292845.1_OchPri3.0/ vertebrate_mammalian] | |||
|- | |||
! 72 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosMut1 bosMut1] | |||
(subset: 41191 of 41192) | |||
| Bos grunniens mutus | |||
| Wild yak | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000298355.1/ GCF_000298355.1_BosGru_v2.0] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Bos_mutus/all_assembly_versions/GCF_000298355.1_BosGru_v2.0/ vertebrate_mammalian] | |||
|- | |||
! 73 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eptFus1 eptFus1] | |||
(subset: 6788 of 6788) | |||
| Eptesicus fuscus | |||
| Big brown bat | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000308155.1/ GCF_000308155.1_EptFus1.0] | |||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Eptesicus_fuscus/all_assembly_versions/GCF_000308155.1_EptFus1.0/ vertebrate_mammalian] | |||
|- | |||
! 74 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteAle1 pteAle1] | |||
(subset: 65597 of 65598) | |||
| Pteropus alecto | |||
| Black flying-fox | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000325575.1/ GCF_000325575.1_ASM32557v1] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Pteropus_alecto/all_assembly_versions/GCF_000325575.1_ASM32557v1/ vertebrate_mammalian] | |||
|- | |||
! 75 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr3 loxAfr3] | |||
| Loxodonta africana | |||
| Elephant | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001905.1/ GCF_000001905.1_Loxafr3.0] | |||
(subset: 2352 of 2353) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Loxodonta_africana/all_assembly_versions/GCF_000001905.1_Loxafr3.0/ vertebrate_mammalian] | |||
|- | |||
! 76 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna1 ornAna1] | |||
| Ornithorhynchus anatinus | |||
| Platypus | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002275.2/ GCF_000002275.2_Ornithorhynchus_anatinus_5.0.1] | |||
(subset: 200154 of 201523) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ornithorhynchus_anatinus/all_assembly_versions/GCF_000002275.2_Ornithorhynchus_anatinus_5.0.1/ vertebrate_mammalian] | |||
|- | |||
! 77 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau6 bosTau6] | |||
| Bos taurus | |||
| Cow | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000003055.6/ GCF_000003055.6_Bos_taurus_UMD_3.1.1] | |||
(subset: 3144 of 3317) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Bos_taurus/all_assembly_versions/GCF_000003055.6_Bos_taurus_UMD_3.1.1/ vertebrate_mammalian] | |||
|- | |||
! 78 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryCun2 oryCun2] | |||
| Oryctolagus cuniculus | |||
| Rabbit | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000003625.3/ GCF_000003625.3_OryCun2.0] | |||
(subset: 3241 of 3242) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Oryctolagus_cuniculus/all_assembly_versions/GCF_000003625.3_OryCun2.0/ vertebrate_mammalian] | |||
|- | |||
! 79 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu3 nomLeu3] | |||
| Nomascus leucogenys | |||
| Gibbon | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000146795.2/ GCF_000146795.2_Nleu_3.0] | |||
(subset: 17484 of 17492) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Nomascus_leucogenys/all_assembly_versions/GCF_000146795.2_Nleu_3.0/ vertebrate_mammalian] | |||
|- | |||
! 80 | |||
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=turTru2 turTru2] | |||
(has dups: 9) | |||
| Tursiops truncatus | |||
| Dolphin | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000151865.2/ GCF_000151865.2_Ttru_1.4] | |||
(has dups: 9) | |||
(subset: 240548 of 240891) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Tursiops_truncatus/all_assembly_versions/GCF_000151865.2_Ttru_1.4/ vertebrate_mammalian] | |||
|- | |||
! 81 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac2 vicPac2] | |||
| Vicugna pacos | |||
| Alpaca | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000164845.2/ GCF_000164845.2_Vicugna_pacos-2.0.2] | |||
(has dups: 115) | |||
(subset: 276610 of 276611) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Vicugna_pacos/all_assembly_versions/GCF_000164845.2_Vicugna_pacos-2.0.2/ vertebrate_mammalian] | |||
|- | |||
! 82 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=criGri1 criGri1] | |||
| Cricetulus griseus | |||
| Chinese hamster | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000419365.1/ GCF_000419365.1_C_griseus_v1.0] | |||
(subset: 52710 of 52711) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Cricetulus_griseus/all_assembly_versions/GCF_000419365.1_C_griseus_v1.0/ vertebrate_mammalian] | |||
|- | |||
! 83 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bisBis1 bisBis1] | |||
| Bison bison bison | |||
| Bison | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000754665.1/ GCF_000754665.1_Bison_UMD1.0] | |||
(subset: 128431 of 450182) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Bison_bison/all_assembly_versions/GCF_000754665.1_Bison_UMD1.0/ vertebrate_mammalian] | |||
|- | |||
! 84 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro3 panTro3] | |||
| Pan troglodytes | |||
| Chimp | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001515.5/ GCF_000001515.5_Pan_troglodytes-2.1.4] | |||
(near match: 24127 of 24129) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Pan_troglodytes/all_assembly_versions/GCF_000001515.5_Pan_troglodytes-2.1.4/ vertebrate_mammalian] | |||
|- | |||
! 85 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna2 ornAna2] | |||
| Ornithorhynchus anatinus | |||
| Platypus | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002275.2/ GCF_000002275.2_Ornithorhynchus_anatinus_5.0.1] | |||
(near match: 200153 of 200154) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ornithorhynchus_anatinus/all_assembly_versions/GCF_000002275.2_Ornithorhynchus_anatinus_5.0.1/ vertebrate_mammalian] | |||
|- | |||
! 86 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac2 rheMac2] | |||
(near match: 21 of 22) | |||
| Macaca mulatta | |||
| Rhesus | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002255.3/ GCF_000002255.3_Mmul_051212] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Macaca_mulatta/all_assembly_versions/GCF_000002255.3_Mmul_051212/ vertebrate_mammalian] | |||
|- | |||
! 87 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom5 monDom5] | |||
(near match: 10 of 11) | |||
| Monodelphis domestica | |||
| Opossum | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002295.2/ GCF_000002295.2_MonDom5] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Monodelphis_domestica/all_assembly_versions/GCF_000002295.2_MonDom5/ vertebrate_mammalian] | |||
|- | |||
! 88 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equCab2 equCab2] | |||
(near match: 33 of 34) | |||
| Equus caballus | |||
| Horse | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002305.2/ GCF_000002305.2_EquCab2.0] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Equus_caballus/all_assembly_versions/GCF_000002305.2_EquCab2.0/ vertebrate_mammalian] | |||
|- | |||
! 89 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau7 bosTau7] | |||
(near match: 11691 of 11692) | |||
| Bos taurus | |||
| Cow | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000003205.5/ GCF_000003205.5_Btau_4.6.1] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Bos_taurus/all_assembly_versions/GCF_000003205.5_Btau_4.6.1/ vertebrate_mammalian] | |||
|- | |||
! 90 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equPrz1 equPrz1] | |||
(near match: 53096 of 53097) | |||
| Equus przewalskii | |||
| Przewalski horse | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000696695.1/ GCF_000696695.1_Burgud] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Equus_przewalskii/all_assembly_versions/GCF_000696695.1_Burgud/ vertebrate_mammalian] | |||
|- | |||
! 91 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allMis1 allMis1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allMis1 allMis1] | ||
| Alligator mississippiensis | | Alligator mississippiensis | ||
| Line 443: | Line 713: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Alligator_mississippiensis/all_assembly_versions/GCF_000281125.1_allMis0.2/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Alligator_mississippiensis/all_assembly_versions/GCF_000281125.1_allMis0.2/ vertebrate_other] | ||
|- | |- | ||
! | ! 92 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allSin1 allSin1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allSin1 allSin1] | ||
| Alligator sinensis | | Alligator sinensis | ||
| Line 450: | Line 720: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Alligator_sinensis/all_assembly_versions/GCF_000455745.1_ASM45574v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Alligator_sinensis/all_assembly_versions/GCF_000455745.1_ASM45574v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 93 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anaPla1 anaPla1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anaPla1 anaPla1] | ||
| Anas platyrhynchos | | Anas platyrhynchos | ||
| Line 457: | Line 727: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Anas_platyrhynchos/all_assembly_versions/GCF_000355885.1_BGI_duck_1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Anas_platyrhynchos/all_assembly_versions/GCF_000355885.1_BGI_duck_1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 94 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoCar2 anoCar2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoCar2 anoCar2] | ||
| Anolis carolinensis | | Anolis carolinensis | ||
| Line 464: | Line 734: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Anolis_carolinensis/all_assembly_versions/GCF_000090745.1_AnoCar2.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Anolis_carolinensis/all_assembly_versions/GCF_000090745.1_AnoCar2.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 95 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apaVit1 apaVit1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apaVit1 apaVit1] | ||
| Apaloderma vittatum | | Apaloderma vittatum | ||
| Line 471: | Line 741: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Apaloderma_vittatum/all_assembly_versions/GCF_000703405.1_ASM70340v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Apaloderma_vittatum/all_assembly_versions/GCF_000703405.1_ASM70340v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 96 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aptFor1 aptFor1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aptFor1 aptFor1] | ||
| Aptenodytes forsteri | | Aptenodytes forsteri | ||
| Line 478: | Line 748: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Aptenodytes_forsteri/all_assembly_versions/GCF_000699145.1_ASM69914v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Aptenodytes_forsteri/all_assembly_versions/GCF_000699145.1_ASM69914v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 97 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bucRhi1 bucRhi1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bucRhi1 bucRhi1] | ||
| Buceros rhinoceros silvestris | | Buceros rhinoceros silvestris | ||
| Rhinoceros hornbill | | Rhinoceros hornbill | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000710305.1/ GCF_000710305.1_ASM71030v1] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000710305.1/ GCF_000710305.1_ASM71030v1] | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Buceros_rhinoceros/all_assembly_versions/GCF_000710305.1_ASM71030v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Buceros_rhinoceros/all_assembly_versions/GCF_000710305.1_ASM71030v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 98 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calAnn1 calAnn1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calAnn1 calAnn1] | ||
| Calypte anna | | Calypte anna | ||
| Line 492: | Line 762: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Calypte_anna/all_assembly_versions/GCF_000699085.1_ASM69908v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Calypte_anna/all_assembly_versions/GCF_000699085.1_ASM69908v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 99 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calMil1 calMil1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calMil1 calMil1] | ||
| Callorhinchus milii | | Callorhinchus milii | ||
| Line 499: | Line 769: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Callorhinchus_milii/all_assembly_versions/GCF_000165045.1_Callorhinchus_milii-6.1.3/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Callorhinchus_milii/all_assembly_versions/GCF_000165045.1_Callorhinchus_milii-6.1.3/ vertebrate_other] | ||
|- | |- | ||
! | ! 100 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=capCar1 capCar1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=capCar1 capCar1] | ||
| Caprimulgus carolinensis | | Caprimulgus carolinensis | ||
| Line 506: | Line 776: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Caprimulgus_carolinensis/all_assembly_versions/GCF_000700745.1_ASM70074v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Caprimulgus_carolinensis/all_assembly_versions/GCF_000700745.1_ASM70074v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 101 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=carCri1 carCri1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=carCri1 carCri1] | ||
| Cariama cristata | | Cariama cristata | ||
| Line 513: | Line 783: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cariama_cristata/all_assembly_versions/GCF_000690535.1_ASM69053v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cariama_cristata/all_assembly_versions/GCF_000690535.1_ASM69053v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 102 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chaVoc2 chaVoc2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chaVoc2 chaVoc2] | ||
| Charadrius vociferus | | Charadrius vociferus | ||
| Line 520: | Line 790: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Charadrius_vociferus/all_assembly_versions/GCF_000708025.1_ASM70802v2/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Charadrius_vociferus/all_assembly_versions/GCF_000708025.1_ASM70802v2/ vertebrate_other] | ||
|- | |- | ||
! | ! 103 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cheMyd1 cheMyd1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cheMyd1 cheMyd1] | ||
| Chelonia mydas | | Chelonia mydas | ||
| Line 527: | Line 797: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Chelonia_mydas/all_assembly_versions/GCF_000344595.1_CheMyd_1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Chelonia_mydas/all_assembly_versions/GCF_000344595.1_CheMyd_1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 104 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlUnd1 chlUnd1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlUnd1 chlUnd1] | ||
| Chlamydotis undulata | | Chlamydotis undulata macqueenii | ||
| Houbara bustard | | Houbara bustard | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000695195.1/ GCF_000695195.1_ASM69519v1] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000695195.1/ GCF_000695195.1_ASM69519v1] | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Chlamydotis_macqueenii/all_assembly_versions/GCF_000695195.1_ASM69519v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Chlamydotis_macqueenii/all_assembly_versions/GCF_000695195.1_ASM69519v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 105 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colLiv1 colLiv1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colLiv1 colLiv1] | ||
| Columba livia | | Columba livia | ||
| Line 541: | Line 811: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Columba_livia/all_assembly_versions/GCF_000337935.1_Cliv_1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Columba_livia/all_assembly_versions/GCF_000337935.1_Cliv_1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 106 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colStr1 colStr1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colStr1 colStr1] | ||
| Colius striatus | | Colius striatus | ||
| Line 548: | Line 818: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Colius_striatus/all_assembly_versions/GCF_000690715.1_ASM69071v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Colius_striatus/all_assembly_versions/GCF_000690715.1_ASM69071v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 107 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corBra1 corBra1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corBra1 corBra1] | ||
| Corvus brachyrhynchos | | Corvus brachyrhynchos | ||
| Line 555: | Line 825: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Corvus_brachyrhynchos/all_assembly_versions/GCF_000691975.1_ASM69197v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Corvus_brachyrhynchos/all_assembly_versions/GCF_000691975.1_ASM69197v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 108 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cucCan1 cucCan1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cucCan1 cucCan1] | ||
| Cuculus canorus | | Cuculus canorus | ||
| Line 562: | Line 832: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cuculus_canorus/all_assembly_versions/GCF_000709325.1_ASM70932v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cuculus_canorus/all_assembly_versions/GCF_000709325.1_ASM70932v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 109 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cynSem1 cynSem1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cynSem1 cynSem1] | ||
| Cynoglossus semilaevis | | Cynoglossus semilaevis | ||
| Line 569: | Line 839: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cynoglossus_semilaevis/all_assembly_versions/GCF_000523025.1_Cse_v1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cynoglossus_semilaevis/all_assembly_versions/GCF_000523025.1_Cse_v1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 110 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer10 danRer10] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer10 danRer10] | ||
| Danio rerio | | Danio rerio | ||
| Line 576: | Line 846: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Danio_rerio/all_assembly_versions/GCF_000002035.5_GRCz10/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Danio_rerio/all_assembly_versions/GCF_000002035.5_GRCz10/ vertebrate_other] | ||
|- | |- | ||
! | ! 111 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer7 danRer7] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer7 danRer7] | ||
| Danio rerio | | Danio rerio | ||
| Line 583: | Line 853: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Danio_rerio/all_assembly_versions/GCF_000002035.4_Zv9/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Danio_rerio/all_assembly_versions/GCF_000002035.4_Zv9/ vertebrate_other] | ||
|- | |- | ||
! | ! 112 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=egrGar1 egrGar1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=egrGar1 egrGar1] | ||
| Egretta garzetta | | Egretta garzetta | ||
| Line 590: | Line 860: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Egretta_garzetta/all_assembly_versions/GCF_000687185.1_ASM68718v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Egretta_garzetta/all_assembly_versions/GCF_000687185.1_ASM68718v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 113 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eurHel1 eurHel1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eurHel1 eurHel1] | ||
| Eurypyga helias | | Eurypyga helias | ||
| Line 597: | Line 867: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Eurypyga_helias/all_assembly_versions/GCF_000690775.1_ASM69077v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Eurypyga_helias/all_assembly_versions/GCF_000690775.1_ASM69077v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 114 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falChe1 falChe1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falChe1 falChe1] | ||
| Falco cherrug | | Falco cherrug | ||
| Line 604: | Line 874: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Falco_cherrug/all_assembly_versions/GCF_000337975.1_F_cherrug_v1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Falco_cherrug/all_assembly_versions/GCF_000337975.1_F_cherrug_v1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 115 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falPer1 falPer1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falPer1 falPer1] | ||
| Falco peregrinus | | Falco peregrinus | ||
| Line 611: | Line 881: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Falco_peregrinus/all_assembly_versions/GCF_000337955.1_F_peregrinus_v1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Falco_peregrinus/all_assembly_versions/GCF_000337955.1_F_peregrinus_v1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 116 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ficAlb2 ficAlb2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ficAlb2 ficAlb2] | ||
| Ficedula albicollis | | Ficedula albicollis | ||
| Line 618: | Line 888: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Ficedula_albicollis/all_assembly_versions/GCF_000247815.1_FicAlb1.5/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Ficedula_albicollis/all_assembly_versions/GCF_000247815.1_FicAlb1.5/ vertebrate_other] | ||
|- | |- | ||
! | ! 117 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr3 fr3] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr3 fr3] | ||
| Takifugu rubripes | | Takifugu rubripes | ||
| Line 625: | Line 895: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Takifugu_rubripes/all_assembly_versions/GCF_000180615.1_FUGU5/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Takifugu_rubripes/all_assembly_versions/GCF_000180615.1_FUGU5/ vertebrate_other] | ||
|- | |- | ||
! | ! 118 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fulGla1 fulGla1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fulGla1 fulGla1] | ||
| Fulmarus glacialis | | Fulmarus glacialis | ||
| Line 632: | Line 902: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Fulmarus_glacialis/all_assembly_versions/GCF_000690835.1_ASM69083v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Fulmarus_glacialis/all_assembly_versions/GCF_000690835.1_ASM69083v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 119 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal4 galGal4] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal4 galGal4] | ||
| Gallus gallus | | Gallus gallus | ||
| Line 639: | Line 909: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gallus_gallus/all_assembly_versions/GCF_000002315.3_Gallus_gallus-4.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gallus_gallus/all_assembly_versions/GCF_000002315.3_Gallus_gallus-4.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 120 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal5 galGal5] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal5 galGal5] | ||
| Gallus gallus | | Gallus gallus | ||
| Line 646: | Line 916: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gallus_gallus/all_assembly_versions/GCF_000002315.4_Gallus_gallus-5.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gallus_gallus/all_assembly_versions/GCF_000002315.4_Gallus_gallus-5.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 121 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gavSte1 gavSte1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gavSte1 gavSte1] | ||
| Gavia stellata | | Gavia stellata | ||
| Line 653: | Line 923: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gavia_stellata/all_assembly_versions/GCF_000690875.1_ASM69087v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gavia_stellata/all_assembly_versions/GCF_000690875.1_ASM69087v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 122 | ||
| gekJap0 | | gekJap0 | ||
| | | notFound | ||
| notFound | | notFound | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_001447785.1/ GCF_001447785.1_Gekko_japonicus_V1.1] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001447785.1/ GCF_001447785.1_Gekko_japonicus_V1.1] | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gekko_japonicus/all_assembly_versions/GCF_001447785.1_Gekko_japonicus_V1.1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gekko_japonicus/all_assembly_versions/GCF_001447785.1_Gekko_japonicus_V1.1/ vertebrate_other] | ||
|- | |- | ||
! | ! 123 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=geoFor1 geoFor1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=geoFor1 geoFor1] | ||
| Geospiza fortis | | Geospiza fortis | ||
| Line 667: | Line 937: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Geospiza_fortis/all_assembly_versions/GCF_000277835.1_GeoFor_1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Geospiza_fortis/all_assembly_versions/GCF_000277835.1_GeoFor_1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 124 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halAlb1 halAlb1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halAlb1 halAlb1] | ||
| Haliaeetus albicilla | | Haliaeetus albicilla | ||
| Line 674: | Line 944: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Haliaeetus_albicilla/all_assembly_versions/GCF_000691405.1_ASM69140v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Haliaeetus_albicilla/all_assembly_versions/GCF_000691405.1_ASM69140v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 125 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halLeu1 halLeu1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halLeu1 halLeu1] | ||
| Haliaeetus leucocephalus | | Haliaeetus leucocephalus | ||
| Line 681: | Line 951: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Haliaeetus_leucocephalus/all_assembly_versions/GCF_000737465.1_Haliaeetus_leucocephalus-4.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Haliaeetus_leucocephalus/all_assembly_versions/GCF_000737465.1_Haliaeetus_leucocephalus-4.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 126 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=latCha1 latCha1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=latCha1 latCha1] | ||
| Latimeria chalumnae | | Latimeria chalumnae | ||
| Line 688: | Line 958: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Latimeria_chalumnae/all_assembly_versions/GCF_000225785.1_LatCha1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Latimeria_chalumnae/all_assembly_versions/GCF_000225785.1_LatCha1/ vertebrate_other] | ||
|- | |- | ||
! | ! 127 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepDis1 lepDis1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepDis1 lepDis1] | ||
| Leptosomus discolor | | Leptosomus discolor | ||
| Line 695: | Line 965: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Leptosomus_discolor/all_assembly_versions/GCF_000691785.1_ASM69178v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Leptosomus_discolor/all_assembly_versions/GCF_000691785.1_ASM69178v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 128 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mayZeb1 mayZeb1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mayZeb1 mayZeb1] | ||
| Maylandia zebra | | Maylandia zebra | ||
| Line 702: | Line 972: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Maylandia_zebra/all_assembly_versions/GCF_000238955.1_MetZeb1.1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Maylandia_zebra/all_assembly_versions/GCF_000238955.1_MetZeb1.1/ vertebrate_other] | ||
|- | |- | ||
! | ! 129 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melUnd1 melUnd1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melUnd1 melUnd1] | ||
| Melopsittacus undulatus | | Melopsittacus undulatus | ||
| Line 709: | Line 979: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Melopsittacus_undulatus/all_assembly_versions/GCF_000238935.1_Melopsittacus_undulatus_6.3/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Melopsittacus_undulatus/all_assembly_versions/GCF_000238935.1_Melopsittacus_undulatus_6.3/ vertebrate_other] | ||
|- | |- | ||
! | ! 130 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=merNub1 merNub1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=merNub1 merNub1] | ||
| Merops nubicus | | Merops nubicus | ||
| Line 716: | Line 986: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Merops_nubicus/all_assembly_versions/GCF_000691845.1_ASM69184v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Merops_nubicus/all_assembly_versions/GCF_000691845.1_ASM69184v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 131 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesUni1 mesUni1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesUni1 mesUni1] | ||
| Mesitornis unicolor | | Mesitornis unicolor | ||
| Line 723: | Line 993: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Mesitornis_unicolor/all_assembly_versions/GCF_000695765.1_ASM69576v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Mesitornis_unicolor/all_assembly_versions/GCF_000695765.1_ASM69576v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 132 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nipNip1 nipNip1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nipNip1 nipNip1] | ||
| Nipponia nippon | | Nipponia nippon | ||
| Line 730: | Line 1,000: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Nipponia_nippon/all_assembly_versions/GCF_000708225.1_ASM70822v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Nipponia_nippon/all_assembly_versions/GCF_000708225.1_ASM70822v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 133 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=notCor1 notCor1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=notCor1 notCor1] | ||
| Notothenia coriiceps | | Notothenia coriiceps | ||
| Line 737: | Line 1,007: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Notothenia_coriiceps/all_assembly_versions/GCF_000735185.1_NC01/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Notothenia_coriiceps/all_assembly_versions/GCF_000735185.1_NC01/ vertebrate_other] | ||
|- | |- | ||
! | ! 134 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=opiHoa1 opiHoa1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=opiHoa1 opiHoa1] | ||
| Opisthocomus hoazin | | Opisthocomus hoazin | ||
| Line 744: | Line 1,014: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Opisthocomus_hoazin/all_assembly_versions/GCF_000692075.1_ASM69207v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Opisthocomus_hoazin/all_assembly_versions/GCF_000692075.1_ASM69207v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 135 | ||
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oreNil2 oreNil2](has dups) | | style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oreNil2 oreNil2] | ||
(has dups: 170) | |||
| Oreochromis niloticus | | Oreochromis niloticus | ||
| Nile tilapia | | Nile tilapia | ||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000188235.2/ GCF_000188235.2_Orenil1.1](has dups) | | style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000188235.2/ GCF_000188235.2_Orenil1.1] | ||
(has dups: 170) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Oreochromis_niloticus/all_assembly_versions/GCF_000188235.2_Orenil1.1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Oreochromis_niloticus/all_assembly_versions/GCF_000188235.2_Orenil1.1/ vertebrate_other] | ||
|- | |- | ||
! | ! 136 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelCri1 pelCri1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelCri1 pelCri1] | ||
| Pelecanus crispus | | Pelecanus crispus | ||
| Line 758: | Line 1,030: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pelecanus_crispus/all_assembly_versions/GCF_000687375.1_ASM68737v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pelecanus_crispus/all_assembly_versions/GCF_000687375.1_ASM68737v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 137 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelSin1 pelSin1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelSin1 pelSin1] | ||
| Pelodiscus sinensis | | Pelodiscus sinensis | ||
| Line 765: | Line 1,037: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pelodiscus_sinensis/all_assembly_versions/GCF_000230535.1_PelSin_1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pelodiscus_sinensis/all_assembly_versions/GCF_000230535.1_PelSin_1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 138 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaCar1 phaCar1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaCar1 phaCar1] | ||
| Phalacrocorax carbo | | Phalacrocorax carbo | ||
| Line 772: | Line 1,044: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Phalacrocorax_carbo/all_assembly_versions/GCF_000708925.1_ASM70892v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Phalacrocorax_carbo/all_assembly_versions/GCF_000708925.1_ASM70892v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 139 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaLep1 phaLep1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaLep1 phaLep1] | ||
| Phaethon lepturus | | Phaethon lepturus | ||
| Line 779: | Line 1,051: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Phaethon_lepturus/all_assembly_versions/GCF_000687285.1_ASM68728v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Phaethon_lepturus/all_assembly_versions/GCF_000687285.1_ASM68728v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 140 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=picPub1 picPub1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=picPub1 picPub1] | ||
| Picoides pubescens | | Picoides pubescens | ||
| Line 786: | Line 1,058: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Picoides_pubescens/all_assembly_versions/GCF_000699005.1_ASM69900v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Picoides_pubescens/all_assembly_versions/GCF_000699005.1_ASM69900v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 141 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeFor1 poeFor1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeFor1 poeFor1] | ||
| Poecilia formosa | | Poecilia formosa | ||
| Line 793: | Line 1,065: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Poecilia_formosa/all_assembly_versions/GCF_000485575.1_Poecilia_formosa-5.1.2/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Poecilia_formosa/all_assembly_versions/GCF_000485575.1_Poecilia_formosa-5.1.2/ vertebrate_other] | ||
|- | |- | ||
! | ! 142 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pseHum1 pseHum1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pseHum1 pseHum1] | ||
| Pseudopodoces humilis | | Pseudopodoces humilis | ||
| Line 800: | Line 1,072: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pseudopodoces_humilis/all_assembly_versions/GCF_000331425.1_PseHum1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pseudopodoces_humilis/all_assembly_versions/GCF_000331425.1_PseHum1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 143 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteGut1 pteGut1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteGut1 pteGut1] | ||
| Pterocles gutturalis | | Pterocles gutturalis | ||
| Line 807: | Line 1,079: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pterocles_gutturalis/all_assembly_versions/GCF_000699245.1_ASM69924v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pterocles_gutturalis/all_assembly_versions/GCF_000699245.1_ASM69924v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 144 | ||
| pytBiv0 | | pytBiv0 | ||
| | | notFound | ||
| notFound | | notFound | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000186305.1/ GCF_000186305.1_Python_molurus_bivittatus-5.0.2] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000186305.1/ GCF_000186305.1_Python_molurus_bivittatus-5.0.2] | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Python_bivittatus/all_assembly_versions/GCF_000186305.1_Python_molurus_bivittatus-5.0.2/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Python_bivittatus/all_assembly_versions/GCF_000186305.1_Python_molurus_bivittatus-5.0.2/ vertebrate_other] | ||
|- | |- | ||
! | ! 145 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pytBiv1 pytBiv1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pytBiv1 pytBiv1] | ||
| Python bivittatus | | Python bivittatus | ||
| Line 821: | Line 1,093: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Python_bivittatus/all_assembly_versions/GCF_000186305.1_Python_molurus_bivittatus-5.0.2/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Python_bivittatus/all_assembly_versions/GCF_000186305.1_Python_molurus_bivittatus-5.0.2/ vertebrate_other] | ||
|- | |- | ||
! | ! 146 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strCam1 strCam1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strCam1 strCam1] | ||
| Struthio camelus australis | | Struthio camelus australis | ||
| Ostrich | | Ostrich | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000698965.1/ GCF_000698965.1_ASM69896v1] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000698965.1/ GCF_000698965.1_ASM69896v1] | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Struthio_camelus/all_assembly_versions/GCF_000698965.1_ASM69896v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Struthio_camelus/all_assembly_versions/GCF_000698965.1_ASM69896v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 147 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut2 taeGut2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut2 taeGut2] | ||
| Taeniopygia guttata | | Taeniopygia guttata | ||
| Line 835: | Line 1,107: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Taeniopygia_guttata/all_assembly_versions/GCF_000151805.1_Taeniopygia_guttata-3.2.4/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Taeniopygia_guttata/all_assembly_versions/GCF_000151805.1_Taeniopygia_guttata-3.2.4/ vertebrate_other] | ||
|- | |- | ||
! | ! 148 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tauEry1 tauEry1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tauEry1 tauEry1] | ||
| Tauraco erythrolophus | | Tauraco erythrolophus | ||
| Line 842: | Line 1,114: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tauraco_erythrolophus/all_assembly_versions/GCF_000709365.1_ASM70936v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tauraco_erythrolophus/all_assembly_versions/GCF_000709365.1_ASM70936v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 149 | ||
| thaSir0 | | thaSir0 | ||
| | | notFound | ||
| notFound | | notFound | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_001077635.1/ GCF_001077635.1_Thamnophis_sirtalis-6.0] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001077635.1/ GCF_001077635.1_Thamnophis_sirtalis-6.0] | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Thamnophis_sirtalis/all_assembly_versions/GCF_001077635.1_Thamnophis_sirtalis-6.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Thamnophis_sirtalis/all_assembly_versions/GCF_001077635.1_Thamnophis_sirtalis-6.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 150 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tinGut2 tinGut2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tinGut2 tinGut2] | ||
| Tinamus guttatus | | Tinamus guttatus | ||
| Line 856: | Line 1,128: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tinamus_guttatus/all_assembly_versions/GCF_000705375.1_ASM70537v2/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tinamus_guttatus/all_assembly_versions/GCF_000705375.1_ASM70537v2/ vertebrate_other] | ||
|- | |- | ||
! | ! 151 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tytAlb1 tytAlb1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tytAlb1 tytAlb1] | ||
| Tyto alba | | Tyto alba | ||
| Line 863: | Line 1,135: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tyto_alba/all_assembly_versions/GCF_000687205.1_ASM68720v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tyto_alba/all_assembly_versions/GCF_000687205.1_ASM68720v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 152 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 xenTro7] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 xenTro7] | ||
| Xenopus | | Xenopus tropicalis | ||
| X. tropicalis | | X. tropicalis | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000004195.2/ GCF_000004195.2_Xtropicalis_v7] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000004195.2/ GCF_000004195.2_Xtropicalis_v7] | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xenopus_Silurana_tropicalis/all_assembly_versions/GCF_000004195.2_Xtropicalis_v7/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xenopus_Silurana_tropicalis/all_assembly_versions/GCF_000004195.2_Xtropicalis_v7/ vertebrate_other] | ||
|- | |- | ||
! | ! 153 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 xenTro7] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 xenTro7] | ||
| Xenopus tropicalis | | Xenopus tropicalis | ||
| Line 877: | Line 1,149: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xenopus_tropicalis/all_assembly_versions/GCF_000004195.2_Xtropicalis_v7/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xenopus_tropicalis/all_assembly_versions/GCF_000004195.2_Xtropicalis_v7/ vertebrate_other] | ||
|- | |- | ||
! | ! 154 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xipMac1 xipMac1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xipMac1 xipMac1] | ||
| Xiphophorus maculatus | | Xiphophorus maculatus | ||
| Line 884: | Line 1,156: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xiphophorus_maculatus/all_assembly_versions/GCF_000241075.1_Xiphophorus_maculatus-4.4.2/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xiphophorus_maculatus/all_assembly_versions/GCF_000241075.1_Xiphophorus_maculatus-4.4.2/ vertebrate_other] | ||
|- | |- | ||
! | ! 155 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zonAlb1 zonAlb1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zonAlb1 zonAlb1] | ||
| Zonotrichia albicollis | | Zonotrichia albicollis | ||
| Line 891: | Line 1,163: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Zonotrichia_albicollis/all_assembly_versions/GCF_000385455.1_Zonotrichia_albicollis-1.0.1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Zonotrichia_albicollis/all_assembly_versions/GCF_000385455.1_Zonotrichia_albicollis-1.0.1/ vertebrate_other] | ||
|- | |- | ||
! | ! 156 | ||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=punNye1 punNye1] | |||
(subset: 7233 of 7233) | |||
| Pundamilia nyererei | |||
| Pundamilia nyererei | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000239375.1/ GCF_000239375.1_PunNye1.0] | |||
(has dups: 3) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pundamilia_nyererei/all_assembly_versions/GCF_000239375.1_PunNye1.0/ vertebrate_other] | |||
|- | |||
! 157 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=neoBri1 neoBri1] | |||
(subset: 9083 of 9083) | |||
| Neolamprologus brichardi | |||
| Princess of Burundi | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000239395.1/ GCF_000239395.1_NeoBri1.0] | |||
(has dups: 16) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Neolamprologus_brichardi/all_assembly_versions/GCF_000239395.1_NeoBri1.0/ vertebrate_other] | |||
|- | |||
! 158 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hapBur1 hapBur1] | |||
(subset: 7994 of 7994) | |||
| Haplochromis burtoni | |||
| Burton's mouthbreeder | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000239415.1/ GCF_000239415.1_AstBur1.0] | |||
(has dups: 7) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Haplochromis_burtoni/all_assembly_versions/GCF_000239415.1_AstBur1.0/ vertebrate_other] | |||
|- | |||
! 159 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepOcu1 lepOcu1] | |||
(subset: 1925 of 1925) | |||
| Lepisosteus oculatus | |||
| Spotted gar | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000242695.1/ GCF_000242695.1_LepOcu1] | |||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Lepisosteus_oculatus/all_assembly_versions/GCF_000242695.1_LepOcu1/ vertebrate_other] | |||
|- | |||
! 160 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=serCan1 serCan1] | |||
(subset: 304397 of 304397) | |||
| Serinus canaria | |||
| Canary | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000534875.1/ GCF_000534875.1_SCA1] | |||
(has dups: 3) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Serinus_canaria/all_assembly_versions/GCF_000534875.1_SCA1/ vertebrate_other] | |||
|- | |||
! 161 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=stePar1 stePar1] | |||
(subset: 5817 of 5817) | |||
| Stegastes partitus | |||
| Bicolor damselfish | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000690725.1/ GCF_000690725.1_Stegastes_partitus-1.0.2] | |||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Stegastes_partitus/all_assembly_versions/GCF_000690725.1_Stegastes_partitus-1.0.2/ vertebrate_other] | |||
|- | |||
! 162 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pygAde1 pygAde1] | |||
(subset: 19264 of 19265) | |||
| Pygoscelis adeliae | |||
| Adelie penguin | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000699105.1/ GCF_000699105.1_ASM69910v1] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pygoscelis_adeliae/all_assembly_versions/GCF_000699105.1_ASM69910v1/ vertebrate_other] | |||
|- | |||
! 163 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=esoLuc1 esoLuc1] | |||
(subset: 5325 of 5326) | |||
| Esox lucius | |||
| Northern pike | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000721915.1/ GCF_000721915.1_EsoLuc1.0] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Esox_lucius/all_assembly_versions/GCF_000721915.1_EsoLuc1.0/ vertebrate_other] | |||
|- | |||
! 164 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cypVar1 cypVar1] | |||
(subset: 9258 of 9259) | |||
| Cyprinodon variegatus | |||
| Sheepshead minnow | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000732505.1/ GCF_000732505.1_C_variegatus-1.0] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cyprinodon_variegatus/all_assembly_versions/GCF_000732505.1_C_variegatus-1.0/ vertebrate_other] | |||
|- | |||
! 165 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corCor1 corCor1] | |||
(subset: 1298 of 1299) | |||
| Corvus cornix cornix | |||
| Hooded crow | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000738735.1/ GCF_000738735.1_Hooded_Crow_genome] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Corvus_cornix/all_assembly_versions/GCF_000738735.1_Hooded_Crow_genome/ vertebrate_other] | |||
|- | |||
! 166 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aquChr2 aquChr2] | |||
(subset: 1141 of 1142) | |||
| Aquila chrysaetos canadensis | |||
| Golden eagle | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000766835.1/ GCF_000766835.1_Aquila_chrysaetos-1.0.2] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Aquila_chrysaetos/all_assembly_versions/GCF_000766835.1_Aquila_chrysaetos-1.0.2/ vertebrate_other] | |||
|- | |||
! 167 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=astMex1 astMex1] | |||
| Astyanax mexicanus | |||
| Mexican tetra (cavefish) | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000372685.1/ GCF_000372685.1_Astyanax_mexicanus-1.0.2] | |||
(subset: 10735 of 10736) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Astyanax_mexicanus/all_assembly_versions/GCF_000372685.1_Astyanax_mexicanus-1.0.2/ vertebrate_other] | |||
|- | |||
! 168 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=manVit1 manVit1] | |||
| Manacus vitellinus | |||
| Golden-collared manakin | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000692015.1/ GCF_000692015.1_ASM69201v2] | |||
(subset: 92755 of 92789) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Manacus_vitellinus/all_assembly_versions/GCF_000692015.1_ASM69201v2/ vertebrate_other] | |||
|- | |||
! 169 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=acaChl1 acaChl1] | |||
| Acanthisitta chloris | |||
| Rifleman | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000695815.1/ GCF_000695815.1_ASM69581v1] | |||
(subset: 53875 of 53876) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Acanthisitta_chloris/all_assembly_versions/GCF_000695815.1_ASM69581v1/ vertebrate_other] | |||
|- | |||
! 170 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melGal1 melGal1] | |||
(near match: 5890 of 5891) | |||
| Meleagris gallopavo | |||
| Turkey | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000146605.1/ GCF_000146605.1_Turkey_2.01] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Meleagris_gallopavo/all_assembly_versions/GCF_000146605.1_Turkey_2.01/ vertebrate_other] | |||
|- | |||
! 171 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrPic2 chrPic2] | |||
(near match: 78594 of 78595) | |||
| Chrysemys picta bellii | |||
| Painted turtle | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000241765.3/ GCF_000241765.3_Chrysemys_picta_bellii-3.0.3] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Chrysemys_picta/all_assembly_versions/GCF_000241765.3_Chrysemys_picta_bellii-3.0.3/ vertebrate_other] | |||
|- | |||
! 172 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeRet1 poeRet1] | |||
(near match: 2766 of 2767) | |||
| Poecilia reticulata | |||
| Guppy | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000633615.1/ GCF_000633615.1_Guppy_female_1.0_MT] | |||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Poecilia_reticulata/all_assembly_versions/GCF_000633615.1_Guppy_female_1.0_MT/ vertebrate_other] | |||
|- | |||
! 173 | |||
| acrEch0 | | acrEch0 | ||
| | | notFound | ||
| notFound | | notFound | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000204515.1/ GCF_000204515.1_Aech_3.9] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000204515.1/ GCF_000204515.1_Aech_3.9] | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Acromyrmex_echinatior/all_assembly_versions/GCF_000204515.1_Aech_3.9/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Acromyrmex_echinatior/all_assembly_versions/GCF_000204515.1_Aech_3.9/ invertebrate] | ||
|- | |- | ||
! | ! 174 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel4 apiMel4] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel4 apiMel4] | ||
| Apis mellifera | | Apis mellifera | ||
| Line 905: | Line 1,320: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Apis_mellifera/all_assembly_versions/GCF_000002195.4_Amel_4.5/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Apis_mellifera/all_assembly_versions/GCF_000002195.4_Amel_4.5/ invertebrate] | ||
|- | |- | ||
! | ! 175 | ||
| attCep0 | | attCep0 | ||
| | | notFound | ||
| notFound | | notFound | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000143395.1/ GCF_000143395.1_Attacep1.0] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000143395.1/ GCF_000143395.1_Attacep1.0] | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Atta_cephalotes/all_assembly_versions/GCF_000143395.1_Attacep1.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Atta_cephalotes/all_assembly_versions/GCF_000143395.1_Attacep1.0/ invertebrate] | ||
|- | |- | ||
! | ! 176 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem4 caeRem4] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem4 caeRem4] | ||
| Caenorhabditis remanei | | Caenorhabditis remanei | ||
| Line 919: | Line 1,334: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Caenorhabditis_remanei/all_assembly_versions/GCF_000149515.1_ASM14951v1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Caenorhabditis_remanei/all_assembly_versions/GCF_000149515.1_ASM14951v1/ invertebrate] | ||
|- | |- | ||
! | ! 177 | ||
| camFlo0 | | camFlo0 | ||
| | | notFound | ||
| notFound | | notFound | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000147175.1/ GCF_000147175.1_CamFlo_1.0] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000147175.1/ GCF_000147175.1_CamFlo_1.0] | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Camponotus_floridanus/all_assembly_versions/GCF_000147175.1_CamFlo_1.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Camponotus_floridanus/all_assembly_versions/GCF_000147175.1_CamFlo_1.0/ invertebrate] | ||
|- | |- | ||
! | ! 178 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce11 ce11] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce11 ce11] | ||
| Caenorhabditis elegans | | Caenorhabditis elegans | ||
| Line 933: | Line 1,348: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Caenorhabditis_elegans/all_assembly_versions/GCF_000002985.6_WBcel235/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Caenorhabditis_elegans/all_assembly_versions/GCF_000002985.6_WBcel235/ invertebrate] | ||
|- | |- | ||
! | ! 179 | ||
| cerBir0 | | cerBir0 | ||
| | | notFound | ||
| notFound | | notFound | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000611835.1/ GCF_000611835.1_CerBir1.0] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000611835.1/ GCF_000611835.1_CerBir1.0] | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Cerapachys_biroi/all_assembly_versions/GCF_000611835.1_CerBir1.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Cerapachys_biroi/all_assembly_versions/GCF_000611835.1_CerBir1.0/ invertebrate] | ||
|- | |- | ||
! | ! 180 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci3 ci3] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci3 ci3] | ||
| Ciona intestinalis | | Ciona intestinalis | ||
| Line 947: | Line 1,362: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Ciona_intestinalis/all_assembly_versions/GCF_000224145.1_KH/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Ciona_intestinalis/all_assembly_versions/GCF_000224145.1_KH/ invertebrate] | ||
|- | |- | ||
! | ! 181 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm6 dm6] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm6 dm6] | ||
| Drosophila melanogaster | | Drosophila melanogaster | ||
| Line 954: | Line 1,369: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_melanogaster/all_assembly_versions/GCF_000001215.4_Release_6_plus_ISO1_MT/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_melanogaster/all_assembly_versions/GCF_000001215.4_Release_6_plus_ISO1_MT/ invertebrate] | ||
|- | |- | ||
! | ! 182 | ||
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna3 droAna3](has dups) | | style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna3 droAna3] | ||
(has dups: 2) | |||
| Drosophila ananassae | | Drosophila ananassae | ||
| D. ananassae | | D. ananassae | ||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005115.1/ GCF_000005115.1_dana_caf1](has dups) | | style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005115.1/ GCF_000005115.1_dana_caf1] | ||
(has dups: 2) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_ananassae/all_assembly_versions/GCF_000005115.1_dana_caf1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_ananassae/all_assembly_versions/GCF_000005115.1_dana_caf1/ invertebrate] | ||
|- | |- | ||
! | ! 183 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBia2 droBia2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBia2 droBia2] | ||
| Drosophila biarmipes | | Drosophila biarmipes | ||
| Line 968: | Line 1,385: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_biarmipes/all_assembly_versions/GCF_000233415.1_Dbia_2.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_biarmipes/all_assembly_versions/GCF_000233415.1_Dbia_2.0/ invertebrate] | ||
|- | |- | ||
! | ! 184 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBip2 droBip2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBip2 droBip2] | ||
| Drosophila bipectinata | | Drosophila bipectinata | ||
| Line 975: | Line 1,392: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_bipectinata/all_assembly_versions/GCF_000236285.1_Dbip_2.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_bipectinata/all_assembly_versions/GCF_000236285.1_Dbip_2.0/ invertebrate] | ||
|- | |- | ||
! | ! 185 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEle2 droEle2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEle2 droEle2] | ||
| Drosophila elegans | | Drosophila elegans | ||
| Line 982: | Line 1,399: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_elegans/all_assembly_versions/GCF_000224195.1_Dele_2.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_elegans/all_assembly_versions/GCF_000224195.1_Dele_2.0/ invertebrate] | ||
|- | |- | ||
! | ! 186 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEre2 droEre2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEre2 droEre2] | ||
| Drosophila erecta | | Drosophila erecta | ||
| Line 989: | Line 1,406: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_erecta/all_assembly_versions/GCF_000005135.1_dere_caf1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_erecta/all_assembly_versions/GCF_000005135.1_dere_caf1/ invertebrate] | ||
|- | |- | ||
! | ! 187 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEug2 droEug2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEug2 droEug2] | ||
| Drosophila eugracilis | | Drosophila eugracilis | ||
| Line 996: | Line 1,413: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_eugracilis/all_assembly_versions/GCF_000236325.1_Deug_2.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_eugracilis/all_assembly_versions/GCF_000236325.1_Deug_2.0/ invertebrate] | ||
|- | |- | ||
! | ! 188 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droFic2 droFic2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droFic2 droFic2] | ||
| Drosophila ficusphila | | Drosophila ficusphila | ||
| Line 1,003: | Line 1,420: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_ficusphila/all_assembly_versions/GCF_000220665.1_Dfic_2.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_ficusphila/all_assembly_versions/GCF_000220665.1_Dfic_2.0/ invertebrate] | ||
|- | |- | ||
! | ! 189 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droGri2 droGri2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droGri2 droGri2] | ||
| Drosophila grimshawi | | Drosophila grimshawi | ||
| Line 1,010: | Line 1,427: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_grimshawi/all_assembly_versions/GCF_000005155.2_dgri_caf1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_grimshawi/all_assembly_versions/GCF_000005155.2_dgri_caf1/ invertebrate] | ||
|- | |- | ||
! | ! 190 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droKik2 droKik2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droKik2 droKik2] | ||
| Drosophila kikkawai | | Drosophila kikkawai | ||
| Line 1,017: | Line 1,434: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_kikkawai/all_assembly_versions/GCF_000224215.1_Dkik_2.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_kikkawai/all_assembly_versions/GCF_000224215.1_Dkik_2.0/ invertebrate] | ||
|- | |- | ||
! | ! 191 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMir2 droMir2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMir2 droMir2] | ||
| Drosophila miranda | | Drosophila miranda | ||
| Line 1,024: | Line 1,441: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_miranda/all_assembly_versions/GCF_000269505.1_DroMir_2.2/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_miranda/all_assembly_versions/GCF_000269505.1_DroMir_2.2/ invertebrate] | ||
|- | |- | ||
! | ! 192 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj3 droMoj3] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj3 droMoj3] | ||
| Drosophila mojavensis | | Drosophila mojavensis | ||
| Line 1,031: | Line 1,448: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_mojavensis/all_assembly_versions/GCF_000005175.2_dmoj_caf1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_mojavensis/all_assembly_versions/GCF_000005175.2_dmoj_caf1/ invertebrate] | ||
|- | |- | ||
! | ! 193 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droPer1 droPer1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droPer1 droPer1] | ||
| Drosophila persimilis | | Drosophila persimilis | ||
| Line 1,038: | Line 1,455: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_persimilis/all_assembly_versions/GCF_000005195.2_dper_caf1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_persimilis/all_assembly_versions/GCF_000005195.2_dper_caf1/ invertebrate] | ||
|- | |- | ||
! | ! 194 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droRho2 droRho2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droRho2 droRho2] | ||
| Drosophila rhopaloa | | Drosophila rhopaloa | ||
| Line 1,045: | Line 1,462: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_rhopaloa/all_assembly_versions/GCF_000236305.1_Drho_2.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_rhopaloa/all_assembly_versions/GCF_000236305.1_Drho_2.0/ invertebrate] | ||
|- | |- | ||
! | ! 195 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSuz1 droSuz1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSuz1 droSuz1] | ||
| Drosophila suzukii | | Drosophila suzukii | ||
| Line 1,052: | Line 1,469: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_suzukii/all_assembly_versions/GCF_000472105.1_Dsuzukii.v01/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_suzukii/all_assembly_versions/GCF_000472105.1_Dsuzukii.v01/ invertebrate] | ||
|- | |- | ||
! | ! 196 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droTak2 droTak2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droTak2 droTak2] | ||
| Drosophila takahashii | | Drosophila takahashii | ||
| Line 1,059: | Line 1,476: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_takahashii/all_assembly_versions/GCF_000224235.1_Dtak_2.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_takahashii/all_assembly_versions/GCF_000224235.1_Dtak_2.0/ invertebrate] | ||
|- | |- | ||
! | ! 197 | ||
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir3 droVir3](has dups) | | style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir3 droVir3] | ||
(has dups: 1) | |||
| Drosophila virilis | | Drosophila virilis | ||
| D. virilis | | D. virilis | ||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005245.1/ GCF_000005245.1_dvir_caf1](has dups) | | style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005245.1/ GCF_000005245.1_dvir_caf1] | ||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_virilis/all_assembly_versions/GCF_000005245.1_dvir_caf1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_virilis/all_assembly_versions/GCF_000005245.1_dvir_caf1/ invertebrate] | ||
|- | |- | ||
! | ! 198 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droWil2 droWil2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droWil2 droWil2] | ||
| Drosophila willistoni | | Drosophila willistoni | ||
| Line 1,073: | Line 1,492: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_willistoni/all_assembly_versions/GCF_000005925.1_dwil_caf1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_willistoni/all_assembly_versions/GCF_000005925.1_dwil_caf1/ invertebrate] | ||
|- | |- | ||
! | ! 199 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak3 droYak3] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak3 droYak3] | ||
| Drosophila yakuba | | Drosophila yakuba | ||
| Line 1,080: | Line 1,499: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_yakuba/all_assembly_versions/GCF_000005975.2_dyak_caf1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_yakuba/all_assembly_versions/GCF_000005975.2_dyak_caf1/ invertebrate] | ||
|- | |- | ||
! | ! 200 | ||
| harSal0 | | harSal0 | ||
| | | notFound | ||
| notFound | | notFound | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000147195.1/ GCF_000147195.1_HarSal_1.0] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000147195.1/ GCF_000147195.1_HarSal_1.0] | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Harpegnathos_saltator/all_assembly_versions/GCF_000147195.1_HarSal_1.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Harpegnathos_saltator/all_assembly_versions/GCF_000147195.1_HarSal_1.0/ invertebrate] | ||
|- | |- | ||
! | ! 201 | ||
| style="color:red;" | linHum0(has dups) | | style="color:red;" | linHum0 | ||
| | (has dups: 1) | ||
| notFound | |||
| notFound | | notFound | ||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000217595.1/ GCF_000217595.1_Lhum_UMD_V04](has dups) | | style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000217595.1/ GCF_000217595.1_Lhum_UMD_V04] | ||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Linepithema_humile/all_assembly_versions/GCF_000217595.1_Lhum_UMD_V04/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Linepithema_humile/all_assembly_versions/GCF_000217595.1_Lhum_UMD_V04/ invertebrate] | ||
|- | |- | ||
! | ! 202 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lotGig0 lotGig0] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lotGig0 lotGig0] | ||
| Lottia gigantea | | Lottia gigantea | ||
| Line 1,101: | Line 1,522: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Lottia_gigantea/all_assembly_versions/GCF_000327385.1_Helro1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Lottia_gigantea/all_assembly_versions/GCF_000327385.1_Helro1/ invertebrate] | ||
|- | |- | ||
! | ! 203 | ||
| pogBar0 | | pogBar0 | ||
| | | notFound | ||
| notFound | | notFound | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000187915.1/ GCF_000187915.1_Pbar_UMD_V03] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000187915.1/ GCF_000187915.1_Pbar_UMD_V03] | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Pogonomyrmex_barbatus/all_assembly_versions/GCF_000187915.1_Pbar_UMD_V03/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Pogonomyrmex_barbatus/all_assembly_versions/GCF_000187915.1_Pbar_UMD_V03/ invertebrate] | ||
|- | |- | ||
! | ! 204 | ||
| solInv0 | | solInv0 | ||
| | | notFound | ||
| notFound | | notFound | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000188075.1/ GCF_000188075.1_Si_gnG] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000188075.1/ GCF_000188075.1_Si_gnG] | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Solenopsis_invicta/all_assembly_versions/GCF_000188075.1_Si_gnG/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Solenopsis_invicta/all_assembly_versions/GCF_000188075.1_Si_gnG/ invertebrate] | ||
|- | |- | ||
! | ! 205 | ||
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur4 strPur4](has dups) | | style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur4 strPur4] | ||
(has dups: 1) | |||
| Strongylocentrotus purpuratus | | Strongylocentrotus purpuratus | ||
| S. purpuratus | | S. purpuratus | ||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002235.3/ GCF_000002235.3_Spur_3.1](has dups) | | style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002235.3/ GCF_000002235.3_Spur_3.1] | ||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Strongylocentrotus_purpuratus/all_assembly_versions/GCF_000002235.3_Spur_3.1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Strongylocentrotus_purpuratus/all_assembly_versions/GCF_000002235.3_Spur_3.1/ invertebrate] | ||
|- | |- | ||
! | ! 206 | ||
| araTha1 | | araTha1 | ||
| | | notFound | ||
| notFound | | notFound | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001735.3/ GCF_000001735.3_TAIR10] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001735.3/ GCF_000001735.3_TAIR10] | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/plant/Arabidopsis_thaliana/all_assembly_versions/GCF_000001735.3_TAIR10/ plant] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/plant/Arabidopsis_thaliana/all_assembly_versions/GCF_000001735.3_TAIR10/ plant] | ||
|- | |- | ||
! | ! 207 | ||
| ricCom1 | | ricCom1 | ||
| | | notFound | ||
| notFound | | notFound | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000151685.1/ GCF_000151685.1_JCVI_RCG_1.1] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000151685.1/ GCF_000151685.1_JCVI_RCG_1.1] | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/plant/Ricinus_communis/all_assembly_versions/GCF_000151685.1_JCVI_RCG_1.1/ plant] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/plant/Ricinus_communis/all_assembly_versions/GCF_000151685.1_JCVI_RCG_1.1/ plant] | ||
|- | |- | ||
! | ! 208 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bunEbo1 bunEbo1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bunEbo1 bunEbo1] | ||
| Bundibugyo ebolavirus | | Bundibugyo ebolavirus | ||
| Bundibugyo ebolavirus | | Bundibugyo ebolavirus | ||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000889155.1/ GCF_000889155.1_ViralProj51245] | | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000889155.1/ GCF_000889155.1_ViralProj51245] | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Bundibugyo_virus/all_assembly_versions/GCF_000889155.1_ViralProj51245/ viral] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Bundibugyo_virus/all_assembly_versions/GCF_000889155.1_ViralProj51245/ viral] | ||
|- | |- | ||
! | ! 209 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=resEbo1 resEbo1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=resEbo1 resEbo1] | ||
| Reston ebolavirus | | Reston ebolavirus | ||
| Line 1,150: | Line 1,573: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Reston_ebolavirus/all_assembly_versions/GCF_000854085.1_ViralProj15006/ viral] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Reston_ebolavirus/all_assembly_versions/GCF_000854085.1_ViralProj15006/ viral] | ||
|- | |- | ||
! | ! 210 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sudEbo1 sudEbo1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sudEbo1 sudEbo1] | ||
| Sudan ebolavirus | | Sudan ebolavirus | ||
| Line 1,157: | Line 1,580: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Sudan_ebolavirus/all_assembly_versions/GCF_000855585.1_ViralProj15012/ viral] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Sudan_ebolavirus/all_assembly_versions/GCF_000855585.1_ViralProj15012/ viral] | ||
|- | |- | ||
! | ! 211 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taiEbo1 taiEbo1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taiEbo1 taiEbo1] | ||
| Tai Forest ebolavirus | | Tai Forest ebolavirus | ||
| Line 1,164: | Line 1,587: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Tai_Forest_ebolavirus/all_assembly_versions/GCF_000888475.1_ViralProj51257/ viral] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Tai_Forest_ebolavirus/all_assembly_versions/GCF_000888475.1_ViralProj51257/ viral] | ||
|- | |- | ||
! | ! 212 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zaiEbo1 zaiEbo1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zaiEbo1 zaiEbo1] | ||
| Zaire ebolavirus | | Zaire ebolavirus | ||
| Line 1,171: | Line 1,594: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Zaire_ebolavirus/all_assembly_versions/GCF_000848505.1_ViralProj14703/ viral] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Zaire_ebolavirus/all_assembly_versions/GCF_000848505.1_ViralProj14703/ viral] | ||
|- | |- | ||
! | ! 213 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sacCer3 sacCer3] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sacCer3 sacCer3] | ||
| Saccharomyces cerevisiae | | Saccharomyces cerevisiae | ||
Revision as of 22:00, 12 August 2016
The correspondence indicated here is exact. Each sequence in both assemblies is identical. Future improvement to this table will indicate subsets, when one assembly is a complete subset of the other, and partial matches when one assembly is mostly identical to the other.
The columns can be sorted. Click on the small arrow icon next to the column header name
The external links go to:
- UCSC browser - genome-test genome browser
- Entrez assembly - assembly information page at NCBI
- NCBI FTP - ftp directory at NCBI where the assembly can be obtained
Note about the (has dups) indication.
Some older assemblies have entire sequences duplicated in multiple contigs
in both the NCBI assembly and the UCSC assembly. Most newer UCSC assemblies
have removed the duplicate contigs, and newer NCBI assemblies now also
remove the duplicate contigs. These duplicate contigs will cause
confusion when coordinating chromosome names.
