UCSC to RefSeq correspondence: Difference between revisions
(now with NCBI no match found) |
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|- | |- | ||
! 59 | ! 59 | ||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm10 mm10] | |||
(subset: 66 of 179) | |||
| Mus_musculus | |||
| Mouse | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001635.22/ GCF_000001635.22_GRCm38.p2] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mus_musculus/all_assembly_versions/GCF_000001635.22_GRCm38.p2/ vertebrate_mammalian] | |||
|- | |||
! 60 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm10 mm10] | |||
(subset: 66 of 182) | |||
| Mus_musculus | |||
| Mouse | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001635.23/ GCF_000001635.23_GRCm38.p3] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mus_musculus/all_assembly_versions/GCF_000001635.23_GRCm38.p3/ vertebrate_mammalian] | |||
|- | |||
! 61 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm10 mm10] | |||
(subset: 66 of 196) | |||
| Mus_musculus | |||
| Mouse | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001635.24/ GCF_000001635.24_GRCm38.p4] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mus_musculus/all_assembly_versions/GCF_000001635.24_GRCm38.p4/ vertebrate_mammalian] | |||
|- | |||
! 62 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm10 mm10] | |||
(subset: 66 of 207) | |||
| Mus_musculus | |||
| Mouse | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001635.25/ GCF_000001635.25_GRCm38.p5] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mus_musculus/all_assembly_versions/GCF_000001635.25_GRCm38.p5/ vertebrate_mammalian] | |||
|- | |||
! 63 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn6 rn6] | |||
(subset: 953 of 953) | |||
| Rattus_norvegicus | |||
| Rat | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001895.5/ GCF_000001895.5_Rnor_6.0] | |||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Rattus_norvegicus/all_assembly_versions/GCF_000001895.5_Rnor_6.0/ vertebrate_mammalian] | |||
|- | |||
! 64 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor3 gorGor3] | |||
(subset: 46823 of 50196) | |||
| Gorilla_gorilla<br>Gorilla gorilla gorilla | |||
| Gorilla | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000151905.1/ GCF_000151905.1_gorGor3.1] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Gorilla_gorilla/all_assembly_versions/GCF_000151905.1_gorGor3.1/ vertebrate_mammalian] | |||
|- | |||
! 65 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac2 vicPac2] | |||
(subset: 276611 of 276611) | |||
| Vicugna_pacos | |||
| Alpaca | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000164845.1/ GCF_000164845.1_Vicugna_pacos-2.0.1] | |||
(has dups: 115) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Vicugna_pacos/all_assembly_versions/GCF_000164845.1_Vicugna_pacos-2.0.1/ vertebrate_mammalian] | |||
|- | |||
! 66 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=saiBol1 saiBol1] | |||
(subset: 2685 of 2686) | |||
| Saimiri_boliviensis | |||
| Squirrel monkey | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000235385.1/ GCF_000235385.1_SaiBol1.0] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Saimiri_boliviensis/all_assembly_versions/GCF_000235385.1_SaiBol1.0/ vertebrate_mammalian] | |||
|- | |||
! 67 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=octDeg1 octDeg1] | |||
(subset: 7134 of 7134) | |||
| Octodon_degus | |||
| Brush-tailed rat | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000260255.1/ GCF_000260255.1_OctDeg1.0] | |||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Octodon_degus/all_assembly_versions/GCF_000260255.1_OctDeg1.0/ vertebrate_mammalian] | |||
|- | |||
! 68 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=conCri1 conCri1] | |||
(subset: 2038 of 2038) | |||
| Condylura_cristata | |||
| Star-nosed mole | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000260355.1/ GCF_000260355.1_ConCri1.0] | |||
(has dups: 2) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Condylura_cristata/all_assembly_versions/GCF_000260355.1_ConCri1.0/ vertebrate_mammalian] | |||
|- | |||
! 69 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chiLan1 chiLan1] | |||
(subset: 2838 of 2839) | |||
| Chinchilla_lanigera | |||
| Chinchilla | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000276665.1/ GCF_000276665.1_ChiLan1.0] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Chinchilla_lanigera/all_assembly_versions/GCF_000276665.1_ChiLan1.0/ vertebrate_mammalian] | |||
|- | |||
! 70 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=jacJac1 jacJac1] | |||
(subset: 10896 of 10896) | |||
| Jaculus_jaculus | |||
| Lesser Egyptian jerboa | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000280705.1/ GCF_000280705.1_JacJac1.0] | |||
(has dups: 2) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Jaculus_jaculus/all_assembly_versions/GCF_000280705.1_JacJac1.0/ vertebrate_mammalian] | |||
|- | |||
! 71 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri3 ochPri3] | |||
(subset: 10420 of 10420) | |||
| Ochotona_princeps | |||
| Pika | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000292845.1/ GCF_000292845.1_OchPri3.0] | |||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ochotona_princeps/all_assembly_versions/GCF_000292845.1_OchPri3.0/ vertebrate_mammalian] | |||
|- | |||
! 72 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosMut1 bosMut1] | |||
(subset: 41191 of 41192) | |||
| Bos_mutus<br>Bos grunniens mutus | |||
| Wild yak | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000298355.1/ GCF_000298355.1_BosGru_v2.0] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Bos_mutus/all_assembly_versions/GCF_000298355.1_BosGru_v2.0/ vertebrate_mammalian] | |||
|- | |||
! 73 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eptFus1 eptFus1] | |||
(subset: 6788 of 6788) | |||
| Eptesicus_fuscus | |||
| Big brown bat | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000308155.1/ GCF_000308155.1_EptFus1.0] | |||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Eptesicus_fuscus/all_assembly_versions/GCF_000308155.1_EptFus1.0/ vertebrate_mammalian] | |||
|- | |||
! 74 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteAle1 pteAle1] | |||
(subset: 65597 of 65598) | |||
| Pteropus_alecto | |||
| Black flying-fox | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000325575.1/ GCF_000325575.1_ASM32557v1] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Pteropus_alecto/all_assembly_versions/GCF_000325575.1_ASM32557v1/ vertebrate_mammalian] | |||
|- | |||
! 75 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr3 loxAfr3] | |||
| Loxodonta_africana | |||
| Elephant | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001905.1/ GCF_000001905.1_Loxafr3.0] | |||
(subset: 2352 of 2353) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Loxodonta_africana/all_assembly_versions/GCF_000001905.1_Loxafr3.0/ vertebrate_mammalian] | |||
|- | |||
! 76 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna1 ornAna1] | |||
| Ornithorhynchus_anatinus | |||
| Platypus | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002275.2/ GCF_000002275.2_Ornithorhynchus_anatinus_5.0.1] | |||
(subset: 200154 of 201523) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ornithorhynchus_anatinus/all_assembly_versions/GCF_000002275.2_Ornithorhynchus_anatinus_5.0.1/ vertebrate_mammalian] | |||
|- | |||
! 77 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau6 bosTau6] | |||
| Bos_taurus | |||
| Cow | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000003055.6/ GCF_000003055.6_Bos_taurus_UMD_3.1.1] | |||
(subset: 3144 of 3317) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Bos_taurus/all_assembly_versions/GCF_000003055.6_Bos_taurus_UMD_3.1.1/ vertebrate_mammalian] | |||
|- | |||
! 78 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryCun2 oryCun2] | |||
| Oryctolagus_cuniculus | |||
| Rabbit | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000003625.3/ GCF_000003625.3_OryCun2.0] | |||
(subset: 3241 of 3242) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Oryctolagus_cuniculus/all_assembly_versions/GCF_000003625.3_OryCun2.0/ vertebrate_mammalian] | |||
|- | |||
! 79 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu3 nomLeu3] | |||
| Nomascus_leucogenys | |||
| Gibbon | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000146795.2/ GCF_000146795.2_Nleu_3.0] | |||
(subset: 17484 of 17492) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Nomascus_leucogenys/all_assembly_versions/GCF_000146795.2_Nleu_3.0/ vertebrate_mammalian] | |||
|- | |||
! 80 | |||
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=turTru2 turTru2] | |||
(has dups: 9) | |||
| Tursiops_truncatus | |||
| Dolphin | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000151865.2/ GCF_000151865.2_Ttru_1.4] | |||
(has dups: 9) | |||
(subset: 240548 of 240891) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Tursiops_truncatus/all_assembly_versions/GCF_000151865.2_Ttru_1.4/ vertebrate_mammalian] | |||
|- | |||
! 81 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac2 vicPac2] | |||
| Vicugna_pacos | |||
| Alpaca | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000164845.2/ GCF_000164845.2_Vicugna_pacos-2.0.2] | |||
(has dups: 115) | |||
(subset: 276610 of 276611) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Vicugna_pacos/all_assembly_versions/GCF_000164845.2_Vicugna_pacos-2.0.2/ vertebrate_mammalian] | |||
|- | |||
! 82 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=criGri1 criGri1] | |||
| Cricetulus_griseus | |||
| Chinese hamster | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000419365.1/ GCF_000419365.1_C_griseus_v1.0] | |||
(subset: 52710 of 52711) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Cricetulus_griseus/all_assembly_versions/GCF_000419365.1_C_griseus_v1.0/ vertebrate_mammalian] | |||
|- | |||
! 83 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bisBis1 bisBis1] | |||
| Bison_bison<br>Bison bison bison | |||
| Bison | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000754665.1/ GCF_000754665.1_Bison_UMD1.0] | |||
(subset: 128431 of 450182) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Bison_bison/all_assembly_versions/GCF_000754665.1_Bison_UMD1.0/ vertebrate_mammalian] | |||
|- | |||
! 84 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro3 panTro3] | |||
| Pan_troglodytes | |||
| Chimp | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001515.5/ GCF_000001515.5_Pan_troglodytes-2.1.4] | |||
(near match: 24127 of 24129) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Pan_troglodytes/all_assembly_versions/GCF_000001515.5_Pan_troglodytes-2.1.4/ vertebrate_mammalian] | |||
|- | |||
! 85 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna2 ornAna2] | |||
| Ornithorhynchus_anatinus | |||
| Platypus | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002275.2/ GCF_000002275.2_Ornithorhynchus_anatinus_5.0.1] | |||
(near match: 200153 of 200154) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ornithorhynchus_anatinus/all_assembly_versions/GCF_000002275.2_Ornithorhynchus_anatinus_5.0.1/ vertebrate_mammalian] | |||
|- | |||
! 86 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac2 rheMac2] | |||
(near match: 21 of 22) | |||
| Macaca_mulatta | |||
| Rhesus | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002255.3/ GCF_000002255.3_Mmul_051212] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Macaca_mulatta/all_assembly_versions/GCF_000002255.3_Mmul_051212/ vertebrate_mammalian] | |||
|- | |||
! 87 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom5 monDom5] | |||
(near match: 10 of 11) | |||
| Monodelphis_domestica | |||
| Opossum | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002295.2/ GCF_000002295.2_MonDom5] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Monodelphis_domestica/all_assembly_versions/GCF_000002295.2_MonDom5/ vertebrate_mammalian] | |||
|- | |||
! 88 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equCab2 equCab2] | |||
(near match: 33 of 34) | |||
| Equus_caballus | |||
| Horse | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002305.2/ GCF_000002305.2_EquCab2.0] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Equus_caballus/all_assembly_versions/GCF_000002305.2_EquCab2.0/ vertebrate_mammalian] | |||
|- | |||
! 89 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau7 bosTau7] | |||
(near match: 11691 of 11692) | |||
| Bos_taurus | |||
| Cow | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000003205.5/ GCF_000003205.5_Btau_4.6.1] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Bos_taurus/all_assembly_versions/GCF_000003205.5_Btau_4.6.1/ vertebrate_mammalian] | |||
|- | |||
! 90 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equPrz1 equPrz1] | |||
(near match: 53096 of 53097) | |||
| Equus_przewalskii | |||
| Przewalski horse | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000696695.1/ GCF_000696695.1_Burgud] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Equus_przewalskii/all_assembly_versions/GCF_000696695.1_Burgud/ vertebrate_mammalian] | |||
|- | |||
! 91 | |||
| notFound | | notFound | ||
| Homo_sapiens | | Homo_sapiens | ||
Line 475: | Line 741: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.30_GRCh38.p4/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.30_GRCh38.p4/ vertebrate_mammalian] | ||
|- | |- | ||
! | ! 92 | ||
| notFound | | notFound | ||
| Homo_sapiens | | Homo_sapiens | ||
Line 483: | Line 749: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.32_GRCh38.p6/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.32_GRCh38.p6/ vertebrate_mammalian] | ||
|- | |- | ||
! | ! 93 | ||
| notFound | | notFound | ||
| Rattus_norvegicus | | Rattus_norvegicus | ||
Line 492: | Line 758: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Rattus_norvegicus/all_assembly_versions/GCF_000002265.2_Rn_Celera/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Rattus_norvegicus/all_assembly_versions/GCF_000002265.2_Rn_Celera/ vertebrate_mammalian] | ||
|- | |- | ||
! | ! 94 | ||
| notFound | | notFound | ||
| Homo_sapiens | | Homo_sapiens | ||
Line 500: | Line 766: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.31_GRCh38.p5/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.31_GRCh38.p5/ vertebrate_mammalian] | ||
|- | |- | ||
! | ! 95 | ||
| notFound | | notFound | ||
| Ovis_aries<br>Ovis aries musimon | | Ovis_aries<br>Ovis aries musimon | ||
Line 508: | Line 774: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ovis_aries/all_assembly_versions/GCF_000765115.1_Oori1/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ovis_aries/all_assembly_versions/GCF_000765115.1_Oori1/ vertebrate_mammalian] | ||
|- | |- | ||
! | ! 96 | ||
| notFound | | notFound | ||
| Pteropus_vampyrus | | Pteropus_vampyrus | ||
Line 516: | Line 782: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Pteropus_vampyrus/all_assembly_versions/GCF_000151845.1_Pvam_2.0/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Pteropus_vampyrus/all_assembly_versions/GCF_000151845.1_Pvam_2.0/ vertebrate_mammalian] | ||
|- | |- | ||
! | ! 97 | ||
| notFound | | notFound | ||
| Homo_sapiens | | Homo_sapiens | ||
Line 524: | Line 790: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.33_GRCh38.p7/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.33_GRCh38.p7/ vertebrate_mammalian] | ||
|- | |- | ||
! | ! 98 | ||
| notFound | | notFound | ||
| Mus_musculus | | Mus_musculus | ||
Line 532: | Line 798: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mus_musculus/all_assembly_versions/GCF_000002165.2_Mm_Celera/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mus_musculus/all_assembly_versions/GCF_000002165.2_Mm_Celera/ vertebrate_mammalian] | ||
|- | |- | ||
! | ! 99 | ||
| notFound | | notFound | ||
| Homo_sapiens | | Homo_sapiens | ||
Line 540: | Line 806: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.34_GRCh38.p8/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.34_GRCh38.p8/ vertebrate_mammalian] | ||
|- | |- | ||
! | ! 100 | ||
| notFound | | notFound | ||
| Homo_sapiens | | Homo_sapiens | ||
Line 548: | Line 814: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.27_GRCh38.p1/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.27_GRCh38.p1/ vertebrate_mammalian] | ||
|- | |- | ||
! | ! 101 | ||
| notFound | | notFound | ||
| Ovis_aries | | Ovis_aries | ||
Line 556: | Line 822: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ovis_aries/all_assembly_versions/GCF_000298735.2_Oar_v4.0/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ovis_aries/all_assembly_versions/GCF_000298735.2_Oar_v4.0/ vertebrate_mammalian] | ||
|- | |- | ||
! | ! 102 | ||
| notFound | | notFound | ||
| Homo_sapiens | | Homo_sapiens | ||
Line 564: | Line 830: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.28_GRCh38.p2/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.28_GRCh38.p2/ vertebrate_mammalian] | ||
|- | |- | ||
! | ! 103 | ||
| notFound | | notFound | ||
| Cricetulus_griseus | | Cricetulus_griseus | ||
Line 572: | Line 838: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Cricetulus_griseus/all_assembly_versions/GCF_000223135.1_CriGri_1.0/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Cricetulus_griseus/all_assembly_versions/GCF_000223135.1_CriGri_1.0/ vertebrate_mammalian] | ||
|- | |- | ||
! | ! 104 | ||
| notFound | | notFound | ||
| Bos_taurus | | Bos_taurus | ||
Line 580: | Line 846: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Bos_taurus/all_assembly_versions/GCF_000003205.7_Btau_5.0.1/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Bos_taurus/all_assembly_versions/GCF_000003205.7_Btau_5.0.1/ vertebrate_mammalian] | ||
|- | |- | ||
! | ! 105 | ||
| notFound | | notFound | ||
| Pongo_abelii | | Pongo_abelii | ||
Line 588: | Line 854: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Pongo_abelii/all_assembly_versions/GCF_000001545.4_P_pygmaeus_2.0.2/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Pongo_abelii/all_assembly_versions/GCF_000001545.4_P_pygmaeus_2.0.2/ vertebrate_mammalian] | ||
|- | |- | ||
! | ! 106 | ||
| notFound | | notFound | ||
| Homo_sapiens | | Homo_sapiens | ||
Line 596: | Line 862: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.29_GRCh38.p3/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.29_GRCh38.p3/ vertebrate_mammalian] | ||
|- | |- | ||
! | ! 107 | ||
| notFound | | notFound | ||
| Dipodomys_ordii | | Dipodomys_ordii | ||
Line 604: | Line 870: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Dipodomys_ordii/all_assembly_versions/GCF_000151885.1_Dord_2.0/ vertebrate_mammalian] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Dipodomys_ordii/all_assembly_versions/GCF_000151885.1_Dord_2.0/ vertebrate_mammalian] | ||
|- | |- | ||
! | ! 108 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allMis1 allMis1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allMis1 allMis1] | ||
| Alligator_mississippiensis | | Alligator_mississippiensis | ||
Line 611: | Line 877: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Alligator_mississippiensis/all_assembly_versions/GCF_000281125.1_allMis0.2/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Alligator_mississippiensis/all_assembly_versions/GCF_000281125.1_allMis0.2/ vertebrate_other] | ||
|- | |- | ||
! | ! 109 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allSin1 allSin1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allSin1 allSin1] | ||
| Alligator_sinensis | | Alligator_sinensis | ||
Line 618: | Line 884: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Alligator_sinensis/all_assembly_versions/GCF_000455745.1_ASM45574v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Alligator_sinensis/all_assembly_versions/GCF_000455745.1_ASM45574v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 110 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anaPla1 anaPla1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anaPla1 anaPla1] | ||
| Anas_platyrhynchos | | Anas_platyrhynchos | ||
Line 625: | Line 891: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Anas_platyrhynchos/all_assembly_versions/GCF_000355885.1_BGI_duck_1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Anas_platyrhynchos/all_assembly_versions/GCF_000355885.1_BGI_duck_1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 111 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoCar2 anoCar2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoCar2 anoCar2] | ||
| Anolis_carolinensis | | Anolis_carolinensis | ||
Line 632: | Line 898: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Anolis_carolinensis/all_assembly_versions/GCF_000090745.1_AnoCar2.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Anolis_carolinensis/all_assembly_versions/GCF_000090745.1_AnoCar2.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 112 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apaVit1 apaVit1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apaVit1 apaVit1] | ||
| Apaloderma_vittatum | | Apaloderma_vittatum | ||
Line 639: | Line 905: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Apaloderma_vittatum/all_assembly_versions/GCF_000703405.1_ASM70340v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Apaloderma_vittatum/all_assembly_versions/GCF_000703405.1_ASM70340v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 113 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aptFor1 aptFor1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aptFor1 aptFor1] | ||
| Aptenodytes_forsteri | | Aptenodytes_forsteri | ||
Line 646: | Line 912: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Aptenodytes_forsteri/all_assembly_versions/GCF_000699145.1_ASM69914v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Aptenodytes_forsteri/all_assembly_versions/GCF_000699145.1_ASM69914v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 114 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bucRhi1 bucRhi1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bucRhi1 bucRhi1] | ||
| Buceros_rhinoceros<br>Buceros rhinoceros silvestris | | Buceros_rhinoceros<br>Buceros rhinoceros silvestris | ||
Line 653: | Line 919: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Buceros_rhinoceros/all_assembly_versions/GCF_000710305.1_ASM71030v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Buceros_rhinoceros/all_assembly_versions/GCF_000710305.1_ASM71030v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 115 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calAnn1 calAnn1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calAnn1 calAnn1] | ||
| Calypte_anna | | Calypte_anna | ||
Line 660: | Line 926: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Calypte_anna/all_assembly_versions/GCF_000699085.1_ASM69908v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Calypte_anna/all_assembly_versions/GCF_000699085.1_ASM69908v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 116 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calMil1 calMil1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calMil1 calMil1] | ||
| Callorhinchus_milii | | Callorhinchus_milii | ||
Line 667: | Line 933: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Callorhinchus_milii/all_assembly_versions/GCF_000165045.1_Callorhinchus_milii-6.1.3/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Callorhinchus_milii/all_assembly_versions/GCF_000165045.1_Callorhinchus_milii-6.1.3/ vertebrate_other] | ||
|- | |- | ||
! | ! 117 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=capCar1 capCar1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=capCar1 capCar1] | ||
| Caprimulgus_carolinensis | | Caprimulgus_carolinensis | ||
Line 674: | Line 940: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Caprimulgus_carolinensis/all_assembly_versions/GCF_000700745.1_ASM70074v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Caprimulgus_carolinensis/all_assembly_versions/GCF_000700745.1_ASM70074v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 118 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=carCri1 carCri1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=carCri1 carCri1] | ||
| Cariama_cristata | | Cariama_cristata | ||
Line 681: | Line 947: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cariama_cristata/all_assembly_versions/GCF_000690535.1_ASM69053v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cariama_cristata/all_assembly_versions/GCF_000690535.1_ASM69053v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 119 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chaVoc2 chaVoc2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chaVoc2 chaVoc2] | ||
| Charadrius_vociferus | | Charadrius_vociferus | ||
Line 688: | Line 954: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Charadrius_vociferus/all_assembly_versions/GCF_000708025.1_ASM70802v2/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Charadrius_vociferus/all_assembly_versions/GCF_000708025.1_ASM70802v2/ vertebrate_other] | ||
|- | |- | ||
! | ! 120 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cheMyd1 cheMyd1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cheMyd1 cheMyd1] | ||
| Chelonia_mydas | | Chelonia_mydas | ||
Line 695: | Line 961: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Chelonia_mydas/all_assembly_versions/GCF_000344595.1_CheMyd_1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Chelonia_mydas/all_assembly_versions/GCF_000344595.1_CheMyd_1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 121 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlUnd1 chlUnd1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlUnd1 chlUnd1] | ||
| Chlamydotis_macqueenii<br>Chlamydotis undulata macqueenii | | Chlamydotis_macqueenii<br>Chlamydotis undulata macqueenii | ||
Line 702: | Line 968: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Chlamydotis_macqueenii/all_assembly_versions/GCF_000695195.1_ASM69519v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Chlamydotis_macqueenii/all_assembly_versions/GCF_000695195.1_ASM69519v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 122 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colLiv1 colLiv1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colLiv1 colLiv1] | ||
| Columba_livia | | Columba_livia | ||
Line 709: | Line 975: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Columba_livia/all_assembly_versions/GCF_000337935.1_Cliv_1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Columba_livia/all_assembly_versions/GCF_000337935.1_Cliv_1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 123 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colStr1 colStr1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colStr1 colStr1] | ||
| Colius_striatus | | Colius_striatus | ||
Line 716: | Line 982: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Colius_striatus/all_assembly_versions/GCF_000690715.1_ASM69071v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Colius_striatus/all_assembly_versions/GCF_000690715.1_ASM69071v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 124 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corBra1 corBra1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corBra1 corBra1] | ||
| Corvus_brachyrhynchos | | Corvus_brachyrhynchos | ||
Line 723: | Line 989: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Corvus_brachyrhynchos/all_assembly_versions/GCF_000691975.1_ASM69197v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Corvus_brachyrhynchos/all_assembly_versions/GCF_000691975.1_ASM69197v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 125 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cucCan1 cucCan1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cucCan1 cucCan1] | ||
| Cuculus_canorus | | Cuculus_canorus | ||
Line 730: | Line 996: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cuculus_canorus/all_assembly_versions/GCF_000709325.1_ASM70932v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cuculus_canorus/all_assembly_versions/GCF_000709325.1_ASM70932v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 126 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cynSem1 cynSem1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cynSem1 cynSem1] | ||
| Cynoglossus_semilaevis | | Cynoglossus_semilaevis | ||
Line 737: | Line 1,003: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cynoglossus_semilaevis/all_assembly_versions/GCF_000523025.1_Cse_v1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cynoglossus_semilaevis/all_assembly_versions/GCF_000523025.1_Cse_v1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 127 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer10 danRer10] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer10 danRer10] | ||
| Danio_rerio | | Danio_rerio | ||
Line 744: | Line 1,010: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Danio_rerio/all_assembly_versions/GCF_000002035.5_GRCz10/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Danio_rerio/all_assembly_versions/GCF_000002035.5_GRCz10/ vertebrate_other] | ||
|- | |- | ||
! | ! 128 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer7 danRer7] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer7 danRer7] | ||
| Danio_rerio | | Danio_rerio | ||
Line 751: | Line 1,017: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Danio_rerio/all_assembly_versions/GCF_000002035.4_Zv9/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Danio_rerio/all_assembly_versions/GCF_000002035.4_Zv9/ vertebrate_other] | ||
|- | |- | ||
! | ! 129 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=egrGar1 egrGar1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=egrGar1 egrGar1] | ||
| Egretta_garzetta | | Egretta_garzetta | ||
Line 758: | Line 1,024: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Egretta_garzetta/all_assembly_versions/GCF_000687185.1_ASM68718v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Egretta_garzetta/all_assembly_versions/GCF_000687185.1_ASM68718v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 130 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eurHel1 eurHel1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eurHel1 eurHel1] | ||
| Eurypyga_helias | | Eurypyga_helias | ||
Line 765: | Line 1,031: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Eurypyga_helias/all_assembly_versions/GCF_000690775.1_ASM69077v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Eurypyga_helias/all_assembly_versions/GCF_000690775.1_ASM69077v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 131 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falChe1 falChe1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falChe1 falChe1] | ||
| Falco_cherrug | | Falco_cherrug | ||
Line 772: | Line 1,038: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Falco_cherrug/all_assembly_versions/GCF_000337975.1_F_cherrug_v1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Falco_cherrug/all_assembly_versions/GCF_000337975.1_F_cherrug_v1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 132 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falPer1 falPer1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falPer1 falPer1] | ||
| Falco_peregrinus | | Falco_peregrinus | ||
Line 779: | Line 1,045: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Falco_peregrinus/all_assembly_versions/GCF_000337955.1_F_peregrinus_v1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Falco_peregrinus/all_assembly_versions/GCF_000337955.1_F_peregrinus_v1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 133 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ficAlb2 ficAlb2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ficAlb2 ficAlb2] | ||
| Ficedula_albicollis | | Ficedula_albicollis | ||
Line 786: | Line 1,052: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Ficedula_albicollis/all_assembly_versions/GCF_000247815.1_FicAlb1.5/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Ficedula_albicollis/all_assembly_versions/GCF_000247815.1_FicAlb1.5/ vertebrate_other] | ||
|- | |- | ||
! | ! 134 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr3 fr3] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr3 fr3] | ||
| Takifugu_rubripes | | Takifugu_rubripes | ||
Line 793: | Line 1,059: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Takifugu_rubripes/all_assembly_versions/GCF_000180615.1_FUGU5/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Takifugu_rubripes/all_assembly_versions/GCF_000180615.1_FUGU5/ vertebrate_other] | ||
|- | |- | ||
! | ! 135 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fulGla1 fulGla1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fulGla1 fulGla1] | ||
| Fulmarus_glacialis | | Fulmarus_glacialis | ||
Line 800: | Line 1,066: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Fulmarus_glacialis/all_assembly_versions/GCF_000690835.1_ASM69083v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Fulmarus_glacialis/all_assembly_versions/GCF_000690835.1_ASM69083v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 136 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal4 galGal4] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal4 galGal4] | ||
| Gallus_gallus | | Gallus_gallus | ||
Line 807: | Line 1,073: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gallus_gallus/all_assembly_versions/GCF_000002315.3_Gallus_gallus-4.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gallus_gallus/all_assembly_versions/GCF_000002315.3_Gallus_gallus-4.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 137 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal5 galGal5] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal5 galGal5] | ||
| Gallus_gallus | | Gallus_gallus | ||
Line 814: | Line 1,080: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gallus_gallus/all_assembly_versions/GCF_000002315.4_Gallus_gallus-5.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gallus_gallus/all_assembly_versions/GCF_000002315.4_Gallus_gallus-5.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 138 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gavSte1 gavSte1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gavSte1 gavSte1] | ||
| Gavia_stellata | | Gavia_stellata | ||
Line 821: | Line 1,087: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gavia_stellata/all_assembly_versions/GCF_000690875.1_ASM69087v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gavia_stellata/all_assembly_versions/GCF_000690875.1_ASM69087v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 139 | ||
| gekJap0 | | gekJap0 | ||
| Gekko japonicus | | Gekko japonicus | ||
Line 828: | Line 1,094: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gekko_japonicus/all_assembly_versions/GCF_001447785.1_Gekko_japonicus_V1.1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gekko_japonicus/all_assembly_versions/GCF_001447785.1_Gekko_japonicus_V1.1/ vertebrate_other] | ||
|- | |- | ||
! | ! 140 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=geoFor1 geoFor1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=geoFor1 geoFor1] | ||
| Geospiza_fortis | | Geospiza_fortis | ||
Line 835: | Line 1,101: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Geospiza_fortis/all_assembly_versions/GCF_000277835.1_GeoFor_1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Geospiza_fortis/all_assembly_versions/GCF_000277835.1_GeoFor_1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 141 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halAlb1 halAlb1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halAlb1 halAlb1] | ||
| Haliaeetus_albicilla | | Haliaeetus_albicilla | ||
Line 842: | Line 1,108: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Haliaeetus_albicilla/all_assembly_versions/GCF_000691405.1_ASM69140v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Haliaeetus_albicilla/all_assembly_versions/GCF_000691405.1_ASM69140v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 142 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halLeu1 halLeu1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halLeu1 halLeu1] | ||
| Haliaeetus_leucocephalus | | Haliaeetus_leucocephalus | ||
Line 849: | Line 1,115: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Haliaeetus_leucocephalus/all_assembly_versions/GCF_000737465.1_Haliaeetus_leucocephalus-4.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Haliaeetus_leucocephalus/all_assembly_versions/GCF_000737465.1_Haliaeetus_leucocephalus-4.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 143 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=latCha1 latCha1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=latCha1 latCha1] | ||
| Latimeria_chalumnae | | Latimeria_chalumnae | ||
Line 856: | Line 1,122: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Latimeria_chalumnae/all_assembly_versions/GCF_000225785.1_LatCha1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Latimeria_chalumnae/all_assembly_versions/GCF_000225785.1_LatCha1/ vertebrate_other] | ||
|- | |- | ||
! | ! 144 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepDis1 lepDis1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepDis1 lepDis1] | ||
| Leptosomus_discolor | | Leptosomus_discolor | ||
Line 863: | Line 1,129: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Leptosomus_discolor/all_assembly_versions/GCF_000691785.1_ASM69178v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Leptosomus_discolor/all_assembly_versions/GCF_000691785.1_ASM69178v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 145 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mayZeb1 mayZeb1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mayZeb1 mayZeb1] | ||
| Maylandia_zebra | | Maylandia_zebra | ||
Line 870: | Line 1,136: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Maylandia_zebra/all_assembly_versions/GCF_000238955.1_MetZeb1.1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Maylandia_zebra/all_assembly_versions/GCF_000238955.1_MetZeb1.1/ vertebrate_other] | ||
|- | |- | ||
! | ! 146 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melUnd1 melUnd1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melUnd1 melUnd1] | ||
| Melopsittacus_undulatus | | Melopsittacus_undulatus | ||
Line 877: | Line 1,143: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Melopsittacus_undulatus/all_assembly_versions/GCF_000238935.1_Melopsittacus_undulatus_6.3/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Melopsittacus_undulatus/all_assembly_versions/GCF_000238935.1_Melopsittacus_undulatus_6.3/ vertebrate_other] | ||
|- | |- | ||
! | ! 147 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=merNub1 merNub1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=merNub1 merNub1] | ||
| Merops_nubicus | | Merops_nubicus | ||
Line 884: | Line 1,150: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Merops_nubicus/all_assembly_versions/GCF_000691845.1_ASM69184v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Merops_nubicus/all_assembly_versions/GCF_000691845.1_ASM69184v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 148 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesUni1 mesUni1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesUni1 mesUni1] | ||
| Mesitornis_unicolor | | Mesitornis_unicolor | ||
Line 891: | Line 1,157: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Mesitornis_unicolor/all_assembly_versions/GCF_000695765.1_ASM69576v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Mesitornis_unicolor/all_assembly_versions/GCF_000695765.1_ASM69576v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 149 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nipNip1 nipNip1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nipNip1 nipNip1] | ||
| Nipponia_nippon | | Nipponia_nippon | ||
Line 898: | Line 1,164: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Nipponia_nippon/all_assembly_versions/GCF_000708225.1_ASM70822v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Nipponia_nippon/all_assembly_versions/GCF_000708225.1_ASM70822v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 150 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=notCor1 notCor1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=notCor1 notCor1] | ||
| Notothenia_coriiceps | | Notothenia_coriiceps | ||
Line 905: | Line 1,171: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Notothenia_coriiceps/all_assembly_versions/GCF_000735185.1_NC01/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Notothenia_coriiceps/all_assembly_versions/GCF_000735185.1_NC01/ vertebrate_other] | ||
|- | |- | ||
! | ! 151 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=opiHoa1 opiHoa1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=opiHoa1 opiHoa1] | ||
| Opisthocomus_hoazin | | Opisthocomus_hoazin | ||
Line 912: | Line 1,178: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Opisthocomus_hoazin/all_assembly_versions/GCF_000692075.1_ASM69207v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Opisthocomus_hoazin/all_assembly_versions/GCF_000692075.1_ASM69207v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 152 | ||
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oreNil2 oreNil2] | | style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oreNil2 oreNil2] | ||
(has dups: 170) | (has dups: 170) | ||
Line 921: | Line 1,187: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Oreochromis_niloticus/all_assembly_versions/GCF_000188235.2_Orenil1.1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Oreochromis_niloticus/all_assembly_versions/GCF_000188235.2_Orenil1.1/ vertebrate_other] | ||
|- | |- | ||
! | ! 153 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelCri1 pelCri1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelCri1 pelCri1] | ||
| Pelecanus_crispus | | Pelecanus_crispus | ||
Line 928: | Line 1,194: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pelecanus_crispus/all_assembly_versions/GCF_000687375.1_ASM68737v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pelecanus_crispus/all_assembly_versions/GCF_000687375.1_ASM68737v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 154 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelSin1 pelSin1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelSin1 pelSin1] | ||
| Pelodiscus_sinensis | | Pelodiscus_sinensis | ||
Line 935: | Line 1,201: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pelodiscus_sinensis/all_assembly_versions/GCF_000230535.1_PelSin_1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pelodiscus_sinensis/all_assembly_versions/GCF_000230535.1_PelSin_1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 155 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaCar1 phaCar1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaCar1 phaCar1] | ||
| Phalacrocorax_carbo | | Phalacrocorax_carbo | ||
Line 942: | Line 1,208: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Phalacrocorax_carbo/all_assembly_versions/GCF_000708925.1_ASM70892v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Phalacrocorax_carbo/all_assembly_versions/GCF_000708925.1_ASM70892v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 156 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaLep1 phaLep1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaLep1 phaLep1] | ||
| Phaethon_lepturus | | Phaethon_lepturus | ||
Line 949: | Line 1,215: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Phaethon_lepturus/all_assembly_versions/GCF_000687285.1_ASM68728v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Phaethon_lepturus/all_assembly_versions/GCF_000687285.1_ASM68728v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 157 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=picPub1 picPub1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=picPub1 picPub1] | ||
| Picoides_pubescens | | Picoides_pubescens | ||
Line 956: | Line 1,222: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Picoides_pubescens/all_assembly_versions/GCF_000699005.1_ASM69900v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Picoides_pubescens/all_assembly_versions/GCF_000699005.1_ASM69900v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 158 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeFor1 poeFor1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeFor1 poeFor1] | ||
| Poecilia_formosa | | Poecilia_formosa | ||
Line 963: | Line 1,229: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Poecilia_formosa/all_assembly_versions/GCF_000485575.1_Poecilia_formosa-5.1.2/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Poecilia_formosa/all_assembly_versions/GCF_000485575.1_Poecilia_formosa-5.1.2/ vertebrate_other] | ||
|- | |- | ||
! | ! 159 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pseHum1 pseHum1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pseHum1 pseHum1] | ||
| Pseudopodoces_humilis | | Pseudopodoces_humilis | ||
Line 970: | Line 1,236: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pseudopodoces_humilis/all_assembly_versions/GCF_000331425.1_PseHum1.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pseudopodoces_humilis/all_assembly_versions/GCF_000331425.1_PseHum1.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 160 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteGut1 pteGut1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteGut1 pteGut1] | ||
| Pterocles_gutturalis | | Pterocles_gutturalis | ||
Line 977: | Line 1,243: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pterocles_gutturalis/all_assembly_versions/GCF_000699245.1_ASM69924v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pterocles_gutturalis/all_assembly_versions/GCF_000699245.1_ASM69924v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 161 | ||
| pytBiv0 | | pytBiv0 | ||
| Python bivittatus | | Python bivittatus | ||
Line 984: | Line 1,250: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Python_bivittatus/all_assembly_versions/GCF_000186305.1_Python_molurus_bivittatus-5.0.2/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Python_bivittatus/all_assembly_versions/GCF_000186305.1_Python_molurus_bivittatus-5.0.2/ vertebrate_other] | ||
|- | |- | ||
! | ! 162 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pytBiv1 pytBiv1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pytBiv1 pytBiv1] | ||
| Python_bivittatus | | Python_bivittatus | ||
Line 991: | Line 1,257: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Python_bivittatus/all_assembly_versions/GCF_000186305.1_Python_molurus_bivittatus-5.0.2/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Python_bivittatus/all_assembly_versions/GCF_000186305.1_Python_molurus_bivittatus-5.0.2/ vertebrate_other] | ||
|- | |- | ||
! | ! 163 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strCam1 strCam1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strCam1 strCam1] | ||
| Struthio_camelus<br>Struthio camelus australis | | Struthio_camelus<br>Struthio camelus australis | ||
Line 998: | Line 1,264: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Struthio_camelus/all_assembly_versions/GCF_000698965.1_ASM69896v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Struthio_camelus/all_assembly_versions/GCF_000698965.1_ASM69896v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 164 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut2 taeGut2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut2 taeGut2] | ||
| Taeniopygia_guttata | | Taeniopygia_guttata | ||
Line 1,005: | Line 1,271: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Taeniopygia_guttata/all_assembly_versions/GCF_000151805.1_Taeniopygia_guttata-3.2.4/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Taeniopygia_guttata/all_assembly_versions/GCF_000151805.1_Taeniopygia_guttata-3.2.4/ vertebrate_other] | ||
|- | |- | ||
! | ! 165 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tauEry1 tauEry1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tauEry1 tauEry1] | ||
| Tauraco_erythrolophus | | Tauraco_erythrolophus | ||
Line 1,012: | Line 1,278: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tauraco_erythrolophus/all_assembly_versions/GCF_000709365.1_ASM70936v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tauraco_erythrolophus/all_assembly_versions/GCF_000709365.1_ASM70936v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 166 | ||
| thaSir0 | | thaSir0 | ||
| Thamnophis sirtalis | | Thamnophis sirtalis | ||
Line 1,019: | Line 1,285: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Thamnophis_sirtalis/all_assembly_versions/GCF_001077635.1_Thamnophis_sirtalis-6.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Thamnophis_sirtalis/all_assembly_versions/GCF_001077635.1_Thamnophis_sirtalis-6.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 167 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tinGut2 tinGut2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tinGut2 tinGut2] | ||
| Tinamus_guttatus | | Tinamus_guttatus | ||
Line 1,026: | Line 1,292: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tinamus_guttatus/all_assembly_versions/GCF_000705375.1_ASM70537v2/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tinamus_guttatus/all_assembly_versions/GCF_000705375.1_ASM70537v2/ vertebrate_other] | ||
|- | |- | ||
! | ! 168 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tytAlb1 tytAlb1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tytAlb1 tytAlb1] | ||
| Tyto_alba | | Tyto_alba | ||
Line 1,033: | Line 1,299: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tyto_alba/all_assembly_versions/GCF_000687205.1_ASM68720v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tyto_alba/all_assembly_versions/GCF_000687205.1_ASM68720v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 169 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 xenTro7] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 xenTro7] | ||
| Xenopus_Silurana_tropicalis<br>Xenopus tropicalis | | Xenopus_Silurana_tropicalis<br>Xenopus tropicalis | ||
Line 1,040: | Line 1,306: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xenopus_Silurana_tropicalis/all_assembly_versions/GCF_000004195.2_Xtropicalis_v7/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xenopus_Silurana_tropicalis/all_assembly_versions/GCF_000004195.2_Xtropicalis_v7/ vertebrate_other] | ||
|- | |- | ||
! | ! 170 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 xenTro7] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 xenTro7] | ||
| Xenopus_tropicalis | | Xenopus_tropicalis | ||
Line 1,047: | Line 1,313: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xenopus_tropicalis/all_assembly_versions/GCF_000004195.2_Xtropicalis_v7/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xenopus_tropicalis/all_assembly_versions/GCF_000004195.2_Xtropicalis_v7/ vertebrate_other] | ||
|- | |- | ||
! | ! 171 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xipMac1 xipMac1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xipMac1 xipMac1] | ||
| Xiphophorus_maculatus | | Xiphophorus_maculatus | ||
Line 1,054: | Line 1,320: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xiphophorus_maculatus/all_assembly_versions/GCF_000241075.1_Xiphophorus_maculatus-4.4.2/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xiphophorus_maculatus/all_assembly_versions/GCF_000241075.1_Xiphophorus_maculatus-4.4.2/ vertebrate_other] | ||
|- | |- | ||
! | ! 172 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zonAlb1 zonAlb1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zonAlb1 zonAlb1] | ||
| Zonotrichia_albicollis | | Zonotrichia_albicollis | ||
Line 1,061: | Line 1,327: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Zonotrichia_albicollis/all_assembly_versions/GCF_000385455.1_Zonotrichia_albicollis-1.0.1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Zonotrichia_albicollis/all_assembly_versions/GCF_000385455.1_Zonotrichia_albicollis-1.0.1/ vertebrate_other] | ||
|- | |- | ||
! | ! 173 | ||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=punNye1 punNye1] | |||
(subset: 7233 of 7233) | |||
| Pundamilia_nyererei | |||
| Pundamilia nyererei | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000239375.1/ GCF_000239375.1_PunNye1.0] | |||
(has dups: 3) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pundamilia_nyererei/all_assembly_versions/GCF_000239375.1_PunNye1.0/ vertebrate_other] | |||
|- | |||
! 174 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=neoBri1 neoBri1] | |||
(subset: 9083 of 9083) | |||
| Neolamprologus_brichardi | |||
| Princess of Burundi | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000239395.1/ GCF_000239395.1_NeoBri1.0] | |||
(has dups: 16) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Neolamprologus_brichardi/all_assembly_versions/GCF_000239395.1_NeoBri1.0/ vertebrate_other] | |||
|- | |||
! 175 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hapBur1 hapBur1] | |||
(subset: 7994 of 7994) | |||
| Haplochromis_burtoni | |||
| Burton's mouthbreeder | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000239415.1/ GCF_000239415.1_AstBur1.0] | |||
(has dups: 7) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Haplochromis_burtoni/all_assembly_versions/GCF_000239415.1_AstBur1.0/ vertebrate_other] | |||
|- | |||
! 176 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepOcu1 lepOcu1] | |||
(subset: 1925 of 1925) | |||
| Lepisosteus_oculatus | |||
| Spotted gar | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000242695.1/ GCF_000242695.1_LepOcu1] | |||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Lepisosteus_oculatus/all_assembly_versions/GCF_000242695.1_LepOcu1/ vertebrate_other] | |||
|- | |||
! 177 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=serCan1 serCan1] | |||
(subset: 304397 of 304397) | |||
| Serinus_canaria | |||
| Canary | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000534875.1/ GCF_000534875.1_SCA1] | |||
(has dups: 3) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Serinus_canaria/all_assembly_versions/GCF_000534875.1_SCA1/ vertebrate_other] | |||
|- | |||
! 178 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=stePar1 stePar1] | |||
(subset: 5817 of 5817) | |||
| Stegastes_partitus | |||
| Bicolor damselfish | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000690725.1/ GCF_000690725.1_Stegastes_partitus-1.0.2] | |||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Stegastes_partitus/all_assembly_versions/GCF_000690725.1_Stegastes_partitus-1.0.2/ vertebrate_other] | |||
|- | |||
! 179 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pygAde1 pygAde1] | |||
(subset: 19264 of 19265) | |||
| Pygoscelis_adeliae | |||
| Adelie penguin | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000699105.1/ GCF_000699105.1_ASM69910v1] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pygoscelis_adeliae/all_assembly_versions/GCF_000699105.1_ASM69910v1/ vertebrate_other] | |||
|- | |||
! 180 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=esoLuc1 esoLuc1] | |||
(subset: 5325 of 5326) | |||
| Esox_lucius | |||
| Northern pike | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000721915.1/ GCF_000721915.1_EsoLuc1.0] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Esox_lucius/all_assembly_versions/GCF_000721915.1_EsoLuc1.0/ vertebrate_other] | |||
|- | |||
! 181 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cypVar1 cypVar1] | |||
(subset: 9258 of 9259) | |||
| Cyprinodon_variegatus | |||
| Sheepshead minnow | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000732505.1/ GCF_000732505.1_C_variegatus-1.0] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cyprinodon_variegatus/all_assembly_versions/GCF_000732505.1_C_variegatus-1.0/ vertebrate_other] | |||
|- | |||
! 182 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corCor1 corCor1] | |||
(subset: 1298 of 1299) | |||
| Corvus_cornix<br>Corvus cornix cornix | |||
| Hooded crow | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000738735.1/ GCF_000738735.1_Hooded_Crow_genome] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Corvus_cornix/all_assembly_versions/GCF_000738735.1_Hooded_Crow_genome/ vertebrate_other] | |||
|- | |||
! 183 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aquChr2 aquChr2] | |||
(subset: 1141 of 1142) | |||
| Aquila_chrysaetos<br>Aquila chrysaetos canadensis | |||
| Golden eagle | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000766835.1/ GCF_000766835.1_Aquila_chrysaetos-1.0.2] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Aquila_chrysaetos/all_assembly_versions/GCF_000766835.1_Aquila_chrysaetos-1.0.2/ vertebrate_other] | |||
|- | |||
! 184 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=astMex1 astMex1] | |||
| Astyanax_mexicanus | |||
| Mexican tetra (cavefish) | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000372685.1/ GCF_000372685.1_Astyanax_mexicanus-1.0.2] | |||
(subset: 10735 of 10736) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Astyanax_mexicanus/all_assembly_versions/GCF_000372685.1_Astyanax_mexicanus-1.0.2/ vertebrate_other] | |||
|- | |||
! 185 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=manVit1 manVit1] | |||
| Manacus_vitellinus | |||
| Golden-collared manakin | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000692015.1/ GCF_000692015.1_ASM69201v2] | |||
(subset: 92755 of 92789) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Manacus_vitellinus/all_assembly_versions/GCF_000692015.1_ASM69201v2/ vertebrate_other] | |||
|- | |||
! 186 | |||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=acaChl1 acaChl1] | |||
| Acanthisitta_chloris | |||
| Rifleman | |||
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000695815.1/ GCF_000695815.1_ASM69581v1] | |||
(subset: 53875 of 53876) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Acanthisitta_chloris/all_assembly_versions/GCF_000695815.1_ASM69581v1/ vertebrate_other] | |||
|- | |||
! 187 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melGal1 melGal1] | |||
(near match: 5890 of 5891) | |||
| Meleagris_gallopavo | |||
| Turkey | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000146605.1/ GCF_000146605.1_Turkey_2.01] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Meleagris_gallopavo/all_assembly_versions/GCF_000146605.1_Turkey_2.01/ vertebrate_other] | |||
|- | |||
! 188 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrPic2 chrPic2] | |||
(near match: 78594 of 78595) | |||
| Chrysemys_picta<br>Chrysemys picta bellii | |||
| Painted turtle | |||
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000241765.3/ GCF_000241765.3_Chrysemys_picta_bellii-3.0.3] | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Chrysemys_picta/all_assembly_versions/GCF_000241765.3_Chrysemys_picta_bellii-3.0.3/ vertebrate_other] | |||
|- | |||
! 189 | |||
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeRet1 poeRet1] | |||
(near match: 2766 of 2767) | |||
| Poecilia_reticulata | |||
| Guppy | |||
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000633615.1/ GCF_000633615.1_Guppy_female_1.0_MT] | |||
(has dups: 1) | |||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Poecilia_reticulata/all_assembly_versions/GCF_000633615.1_Guppy_female_1.0_MT/ vertebrate_other] | |||
|- | |||
! 190 | |||
| notFound | | notFound | ||
| Nestor_notabilis | | Nestor_notabilis | ||
Line 1,069: | Line 1,478: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Nestor_notabilis/all_assembly_versions/GCF_000696875.1_ASM69687v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Nestor_notabilis/all_assembly_versions/GCF_000696875.1_ASM69687v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 191 | ||
| notFound | | notFound | ||
| Coturnix_japonica | | Coturnix_japonica | ||
Line 1,077: | Line 1,486: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Coturnix_japonica/all_assembly_versions/GCF_001577835.1_Coturnix_japonica_2.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Coturnix_japonica/all_assembly_versions/GCF_001577835.1_Coturnix_japonica_2.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 192 | ||
| notFound | | notFound | ||
| Esox_lucius | | Esox_lucius | ||
Line 1,085: | Line 1,494: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Esox_lucius/all_assembly_versions/GCF_000721915.2_ASM72191v2/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Esox_lucius/all_assembly_versions/GCF_000721915.2_ASM72191v2/ vertebrate_other] | ||
|- | |- | ||
! | ! 193 | ||
| notFound | | notFound | ||
| Meleagris_gallopavo | | Meleagris_gallopavo | ||
Line 1,093: | Line 1,502: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Meleagris_gallopavo/all_assembly_versions/GCF_000146605.2_Turkey_5.0/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Meleagris_gallopavo/all_assembly_versions/GCF_000146605.2_Turkey_5.0/ vertebrate_other] | ||
|- | |- | ||
! | ! 194 | ||
| notFound | | notFound | ||
| Oryzias_latipes | | Oryzias_latipes | ||
Line 1,101: | Line 1,510: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Oryzias_latipes/all_assembly_versions/GCF_000313675.1_ASM31367v1/ vertebrate_other] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Oryzias_latipes/all_assembly_versions/GCF_000313675.1_ASM31367v1/ vertebrate_other] | ||
|- | |- | ||
! | ! 195 | ||
| acrEch0 | | acrEch0 | ||
| Acromyrmex echinatior | | Acromyrmex echinatior | ||
Line 1,108: | Line 1,517: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Acromyrmex_echinatior/all_assembly_versions/GCF_000204515.1_Aech_3.9/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Acromyrmex_echinatior/all_assembly_versions/GCF_000204515.1_Aech_3.9/ invertebrate] | ||
|- | |- | ||
! | ! 196 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel4 apiMel4] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel4 apiMel4] | ||
| Apis_mellifera | | Apis_mellifera | ||
Line 1,115: | Line 1,524: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Apis_mellifera/all_assembly_versions/GCF_000002195.4_Amel_4.5/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Apis_mellifera/all_assembly_versions/GCF_000002195.4_Amel_4.5/ invertebrate] | ||
|- | |- | ||
! | ! 197 | ||
| attCep0 | | attCep0 | ||
| Atta cephalotes | | Atta cephalotes | ||
Line 1,122: | Line 1,531: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Atta_cephalotes/all_assembly_versions/GCF_000143395.1_Attacep1.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Atta_cephalotes/all_assembly_versions/GCF_000143395.1_Attacep1.0/ invertebrate] | ||
|- | |- | ||
! | ! 198 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem4 caeRem4] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem4 caeRem4] | ||
| Caenorhabditis_remanei | | Caenorhabditis_remanei | ||
Line 1,129: | Line 1,538: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Caenorhabditis_remanei/all_assembly_versions/GCF_000149515.1_ASM14951v1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Caenorhabditis_remanei/all_assembly_versions/GCF_000149515.1_ASM14951v1/ invertebrate] | ||
|- | |- | ||
! | ! 199 | ||
| camFlo0 | | camFlo0 | ||
| Camponotus floridanus | | Camponotus floridanus | ||
Line 1,136: | Line 1,545: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Camponotus_floridanus/all_assembly_versions/GCF_000147175.1_CamFlo_1.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Camponotus_floridanus/all_assembly_versions/GCF_000147175.1_CamFlo_1.0/ invertebrate] | ||
|- | |- | ||
! | ! 200 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce11 ce11] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce11 ce11] | ||
| Caenorhabditis_elegans | | Caenorhabditis_elegans | ||
Line 1,143: | Line 1,552: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Caenorhabditis_elegans/all_assembly_versions/GCF_000002985.6_WBcel235/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Caenorhabditis_elegans/all_assembly_versions/GCF_000002985.6_WBcel235/ invertebrate] | ||
|- | |- | ||
! | ! 201 | ||
| cerBir0 | | cerBir0 | ||
| Cerapachys biroi | | Cerapachys biroi | ||
Line 1,150: | Line 1,559: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Cerapachys_biroi/all_assembly_versions/GCF_000611835.1_CerBir1.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Cerapachys_biroi/all_assembly_versions/GCF_000611835.1_CerBir1.0/ invertebrate] | ||
|- | |- | ||
! | ! 202 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci3 ci3] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci3 ci3] | ||
| Ciona_intestinalis | | Ciona_intestinalis | ||
Line 1,157: | Line 1,566: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Ciona_intestinalis/all_assembly_versions/GCF_000224145.1_KH/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Ciona_intestinalis/all_assembly_versions/GCF_000224145.1_KH/ invertebrate] | ||
|- | |- | ||
! | ! 203 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm6 dm6] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm6 dm6] | ||
| Drosophila_melanogaster | | Drosophila_melanogaster | ||
Line 1,164: | Line 1,573: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_melanogaster/all_assembly_versions/GCF_000001215.4_Release_6_plus_ISO1_MT/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_melanogaster/all_assembly_versions/GCF_000001215.4_Release_6_plus_ISO1_MT/ invertebrate] | ||
|- | |- | ||
! | ! 204 | ||
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna3 droAna3] | | style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna3 droAna3] | ||
(has dups: 2) | (has dups: 2) | ||
Line 1,173: | Line 1,582: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_ananassae/all_assembly_versions/GCF_000005115.1_dana_caf1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_ananassae/all_assembly_versions/GCF_000005115.1_dana_caf1/ invertebrate] | ||
|- | |- | ||
! | ! 205 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBia2 droBia2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBia2 droBia2] | ||
| Drosophila_biarmipes | | Drosophila_biarmipes | ||
Line 1,180: | Line 1,589: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_biarmipes/all_assembly_versions/GCF_000233415.1_Dbia_2.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_biarmipes/all_assembly_versions/GCF_000233415.1_Dbia_2.0/ invertebrate] | ||
|- | |- | ||
! | ! 206 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBip2 droBip2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBip2 droBip2] | ||
| Drosophila_bipectinata | | Drosophila_bipectinata | ||
Line 1,187: | Line 1,596: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_bipectinata/all_assembly_versions/GCF_000236285.1_Dbip_2.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_bipectinata/all_assembly_versions/GCF_000236285.1_Dbip_2.0/ invertebrate] | ||
|- | |- | ||
! | ! 207 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEle2 droEle2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEle2 droEle2] | ||
| Drosophila_elegans | | Drosophila_elegans | ||
Line 1,194: | Line 1,603: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_elegans/all_assembly_versions/GCF_000224195.1_Dele_2.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_elegans/all_assembly_versions/GCF_000224195.1_Dele_2.0/ invertebrate] | ||
|- | |- | ||
! | ! 208 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEre2 droEre2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEre2 droEre2] | ||
| Drosophila_erecta | | Drosophila_erecta | ||
Line 1,201: | Line 1,610: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_erecta/all_assembly_versions/GCF_000005135.1_dere_caf1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_erecta/all_assembly_versions/GCF_000005135.1_dere_caf1/ invertebrate] | ||
|- | |- | ||
! | ! 209 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEug2 droEug2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEug2 droEug2] | ||
| Drosophila_eugracilis | | Drosophila_eugracilis | ||
Line 1,208: | Line 1,617: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_eugracilis/all_assembly_versions/GCF_000236325.1_Deug_2.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_eugracilis/all_assembly_versions/GCF_000236325.1_Deug_2.0/ invertebrate] | ||
|- | |- | ||
! | ! 210 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droFic2 droFic2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droFic2 droFic2] | ||
| Drosophila_ficusphila | | Drosophila_ficusphila | ||
Line 1,215: | Line 1,624: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_ficusphila/all_assembly_versions/GCF_000220665.1_Dfic_2.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_ficusphila/all_assembly_versions/GCF_000220665.1_Dfic_2.0/ invertebrate] | ||
|- | |- | ||
! | ! 211 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droGri2 droGri2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droGri2 droGri2] | ||
| Drosophila_grimshawi | | Drosophila_grimshawi | ||
Line 1,222: | Line 1,631: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_grimshawi/all_assembly_versions/GCF_000005155.2_dgri_caf1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_grimshawi/all_assembly_versions/GCF_000005155.2_dgri_caf1/ invertebrate] | ||
|- | |- | ||
! | ! 212 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droKik2 droKik2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droKik2 droKik2] | ||
| Drosophila_kikkawai | | Drosophila_kikkawai | ||
Line 1,229: | Line 1,638: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_kikkawai/all_assembly_versions/GCF_000224215.1_Dkik_2.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_kikkawai/all_assembly_versions/GCF_000224215.1_Dkik_2.0/ invertebrate] | ||
|- | |- | ||
! | ! 213 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMir2 droMir2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMir2 droMir2] | ||
| Drosophila_miranda | | Drosophila_miranda | ||
Line 1,236: | Line 1,645: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_miranda/all_assembly_versions/GCF_000269505.1_DroMir_2.2/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_miranda/all_assembly_versions/GCF_000269505.1_DroMir_2.2/ invertebrate] | ||
|- | |- | ||
! | ! 214 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj3 droMoj3] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj3 droMoj3] | ||
| Drosophila_mojavensis | | Drosophila_mojavensis | ||
Line 1,243: | Line 1,652: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_mojavensis/all_assembly_versions/GCF_000005175.2_dmoj_caf1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_mojavensis/all_assembly_versions/GCF_000005175.2_dmoj_caf1/ invertebrate] | ||
|- | |- | ||
! | ! 215 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droPer1 droPer1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droPer1 droPer1] | ||
| Drosophila_persimilis | | Drosophila_persimilis | ||
Line 1,250: | Line 1,659: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_persimilis/all_assembly_versions/GCF_000005195.2_dper_caf1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_persimilis/all_assembly_versions/GCF_000005195.2_dper_caf1/ invertebrate] | ||
|- | |- | ||
! | ! 216 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droRho2 droRho2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droRho2 droRho2] | ||
| Drosophila_rhopaloa | | Drosophila_rhopaloa | ||
Line 1,257: | Line 1,666: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_rhopaloa/all_assembly_versions/GCF_000236305.1_Drho_2.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_rhopaloa/all_assembly_versions/GCF_000236305.1_Drho_2.0/ invertebrate] | ||
|- | |- | ||
! | ! 217 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSuz1 droSuz1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSuz1 droSuz1] | ||
| Drosophila_suzukii | | Drosophila_suzukii | ||
Line 1,264: | Line 1,673: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_suzukii/all_assembly_versions/GCF_000472105.1_Dsuzukii.v01/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_suzukii/all_assembly_versions/GCF_000472105.1_Dsuzukii.v01/ invertebrate] | ||
|- | |- | ||
! | ! 218 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droTak2 droTak2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droTak2 droTak2] | ||
| Drosophila_takahashii | | Drosophila_takahashii | ||
Line 1,271: | Line 1,680: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_takahashii/all_assembly_versions/GCF_000224235.1_Dtak_2.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_takahashii/all_assembly_versions/GCF_000224235.1_Dtak_2.0/ invertebrate] | ||
|- | |- | ||
! | ! 219 | ||
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir3 droVir3] | | style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir3 droVir3] | ||
(has dups: 1) | (has dups: 1) | ||
Line 1,280: | Line 1,689: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_virilis/all_assembly_versions/GCF_000005245.1_dvir_caf1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_virilis/all_assembly_versions/GCF_000005245.1_dvir_caf1/ invertebrate] | ||
|- | |- | ||
! | ! 220 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droWil2 droWil2] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droWil2 droWil2] | ||
| Drosophila_willistoni | | Drosophila_willistoni | ||
Line 1,287: | Line 1,696: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_willistoni/all_assembly_versions/GCF_000005925.1_dwil_caf1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_willistoni/all_assembly_versions/GCF_000005925.1_dwil_caf1/ invertebrate] | ||
|- | |- | ||
! | ! 221 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak3 droYak3] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak3 droYak3] | ||
| Drosophila_yakuba | | Drosophila_yakuba | ||
Line 1,294: | Line 1,703: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_yakuba/all_assembly_versions/GCF_000005975.2_dyak_caf1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_yakuba/all_assembly_versions/GCF_000005975.2_dyak_caf1/ invertebrate] | ||
|- | |- | ||
! | ! 222 | ||
| harSal0 | | harSal0 | ||
| Harpegnathos saltator | | Harpegnathos saltator | ||
Line 1,301: | Line 1,710: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Harpegnathos_saltator/all_assembly_versions/GCF_000147195.1_HarSal_1.0/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Harpegnathos_saltator/all_assembly_versions/GCF_000147195.1_HarSal_1.0/ invertebrate] | ||
|- | |- | ||
! | ! 223 | ||
| style="color:red;" | linHum0 | | style="color:red;" | linHum0 | ||
(has dups: 1) | (has dups: 1) | ||
Line 1,310: | Line 1,719: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Linepithema_humile/all_assembly_versions/GCF_000217595.1_Lhum_UMD_V04/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Linepithema_humile/all_assembly_versions/GCF_000217595.1_Lhum_UMD_V04/ invertebrate] | ||
|- | |- | ||
! | ! 224 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lotGig0 lotGig0] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lotGig0 lotGig0] | ||
| Lottia_gigantea | | Lottia_gigantea | ||
Line 1,317: | Line 1,726: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Lottia_gigantea/all_assembly_versions/GCF_000327385.1_Helro1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Lottia_gigantea/all_assembly_versions/GCF_000327385.1_Helro1/ invertebrate] | ||
|- | |- | ||
! | ! 225 | ||
| pogBar0 | | pogBar0 | ||
| Pogonomyrmex barbatus | | Pogonomyrmex barbatus | ||
Line 1,324: | Line 1,733: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Pogonomyrmex_barbatus/all_assembly_versions/GCF_000187915.1_Pbar_UMD_V03/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Pogonomyrmex_barbatus/all_assembly_versions/GCF_000187915.1_Pbar_UMD_V03/ invertebrate] | ||
|- | |- | ||
! | ! 226 | ||
| solInv0 | | solInv0 | ||
| Solenopsis invicta | | Solenopsis invicta | ||
Line 1,331: | Line 1,740: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Solenopsis_invicta/all_assembly_versions/GCF_000188075.1_Si_gnG/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Solenopsis_invicta/all_assembly_versions/GCF_000188075.1_Si_gnG/ invertebrate] | ||
|- | |- | ||
! | ! 227 | ||
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur4 strPur4] | | style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur4 strPur4] | ||
(has dups: 1) | (has dups: 1) | ||
Line 1,340: | Line 1,749: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Strongylocentrotus_purpuratus/all_assembly_versions/GCF_000002235.3_Spur_3.1/ invertebrate] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Strongylocentrotus_purpuratus/all_assembly_versions/GCF_000002235.3_Spur_3.1/ invertebrate] | ||
|- | |- | ||
! | ! 228 | ||
| araTha1 | | araTha1 | ||
| Arabidopsis thaliana | | Arabidopsis thaliana | ||
Line 1,347: | Line 1,756: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/plant/Arabidopsis_thaliana/all_assembly_versions/GCF_000001735.3_TAIR10/ plant] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/plant/Arabidopsis_thaliana/all_assembly_versions/GCF_000001735.3_TAIR10/ plant] | ||
|- | |- | ||
! | ! 229 | ||
| ricCom1 | | ricCom1 | ||
| Ricinus communis | | Ricinus communis | ||
Line 1,354: | Line 1,763: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/plant/Ricinus_communis/all_assembly_versions/GCF_000151685.1_JCVI_RCG_1.1/ plant] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/plant/Ricinus_communis/all_assembly_versions/GCF_000151685.1_JCVI_RCG_1.1/ plant] | ||
|- | |- | ||
! | ! 230 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bunEbo1 bunEbo1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bunEbo1 bunEbo1] | ||
| Bundibugyo_virus<br>Bundibugyo ebolavirus | | Bundibugyo_virus<br>Bundibugyo ebolavirus | ||
Line 1,361: | Line 1,770: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Bundibugyo_virus/all_assembly_versions/GCF_000889155.1_ViralProj51245/ viral] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Bundibugyo_virus/all_assembly_versions/GCF_000889155.1_ViralProj51245/ viral] | ||
|- | |- | ||
! | ! 231 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=resEbo1 resEbo1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=resEbo1 resEbo1] | ||
| Reston_ebolavirus | | Reston_ebolavirus | ||
Line 1,368: | Line 1,777: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Reston_ebolavirus/all_assembly_versions/GCF_000854085.1_ViralProj15006/ viral] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Reston_ebolavirus/all_assembly_versions/GCF_000854085.1_ViralProj15006/ viral] | ||
|- | |- | ||
! | ! 232 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sudEbo1 sudEbo1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sudEbo1 sudEbo1] | ||
| Sudan_ebolavirus | | Sudan_ebolavirus | ||
Line 1,375: | Line 1,784: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Sudan_ebolavirus/all_assembly_versions/GCF_000855585.1_ViralProj15012/ viral] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Sudan_ebolavirus/all_assembly_versions/GCF_000855585.1_ViralProj15012/ viral] | ||
|- | |- | ||
! | ! 233 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taiEbo1 taiEbo1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taiEbo1 taiEbo1] | ||
| Tai_Forest_ebolavirus | | Tai_Forest_ebolavirus | ||
Line 1,382: | Line 1,791: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Tai_Forest_ebolavirus/all_assembly_versions/GCF_000888475.1_ViralProj51257/ viral] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Tai_Forest_ebolavirus/all_assembly_versions/GCF_000888475.1_ViralProj51257/ viral] | ||
|- | |- | ||
! | ! 234 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zaiEbo1 zaiEbo1] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zaiEbo1 zaiEbo1] | ||
| Zaire_ebolavirus | | Zaire_ebolavirus | ||
Line 1,389: | Line 1,798: | ||
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Zaire_ebolavirus/all_assembly_versions/GCF_000848505.1_ViralProj14703/ viral] | | [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Zaire_ebolavirus/all_assembly_versions/GCF_000848505.1_ViralProj14703/ viral] | ||
|- | |- | ||
! | ! 235 | ||
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sacCer3 sacCer3] | | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sacCer3 sacCer3] | ||
| Saccharomyces_cerevisiae | | Saccharomyces_cerevisiae |
Revision as of 23:27, 12 August 2016
The correspondences show here are exact, subset, and near match. NCBI assemblies with no equivalent UCSC database are listed.
The columns can be sorted. Click on the small arrow icon next to the column header label.
The external links go to:
- UCSC browser - genome-test genome browser
- Entrez assembly - assembly information page at NCBI
- NCBI FTP - ftp directory at NCBI where the assembly can be obtained
Note about the (has dups N) indication.
Some older assemblies have entire sequences duplicated in multiple contigs
in both the NCBI assembly and the UCSC assembly. Most newer UCSC assemblies
have removed the duplicate contigs, and newer NCBI assemblies now also
remove the duplicate contigs. The N indicates how many duplicate
sequences are in the assembly. These duplicate contigs will cause
confusion when coordinating chromosome names.
Note about the (subset N of M) indication. When all contigs of one assembly are completely found in the other assembly, it is marked as a (subset N of M). This is often the result of one assembly including a chrM/chrMT sequence, or duplicate sequences removed from one of the assemblies. The N of M counts the number of sequences in the subset vs. the superset after duplicate sequences have been removed.
Note about the (near match N of M) indication. When almost all contigs of one assembly are completely found in the other assembly, it is marked as a (near match N of M). This is often the result of different sequences for chrM/chrMT, included in each of the assemblies, or a different combination rearrangement of sequences in one assembly. For example monDom5 at UCSC combines all unplaced contigs into a single chrUn sequence whereas NCBI keeps those contigs as separate sequences. The N of M counts the number of sequences identical vs. the total sequences in the other assembly. The limit in this notation is a maximum difference of two sequences in the smaller assembly, and only for vertebrate_mammalian and vertebrate_other assemblies.
NCBI assemblies for the sub-groups vertebrate_mammalian and
vertebrate_other with no equivalent UCSC database are indicated
as (N sequences) where N is
the number of sequences in the NCBI assembly.