Human/hg19/GRCh37 46-way multiple alignment: Difference between revisions
From genomewiki
Jump to navigationJump to search
(New page: The 46 species multiple alignment on human/hg19/GRCh37 is an extra large bit of work. A discussion of the phylogenetic trees used in the alignment is included here.) |
No edit summary |
||
| Line 1: | Line 1: | ||
The 46 species multiple alignment on human/hg19/GRCh37 is an extra large bit of work. A discussion of the phylogenetic trees used in the alignment is included here. | The 46 species multiple alignment on human/hg19/GRCh37 is an extra large bit of work. A discussion of the phylogenetic trees used in the alignment is included here. | ||
==Errata== | |||
The initial release of this track include a phylogenetic tree that had two small errors in it. | |||
[http://hgdownload.cse.ucsc.edu/goldenPath/hg19/multiz46way/46way.nh 46way.nh]<BR> | |||
Namely: Baboon (papHam1) and Rhesus (rheMac2) were specified as separate nodes instead | |||
of correctly sister species. The same problem is present for Wallaby (macEug1) and | |||
Opossum (monDom5). The discussion below includes a corrected phylogenetic tree. | |||
==Corrected Tree== | |||
Revision as of 22:45, 3 December 2009
The 46 species multiple alignment on human/hg19/GRCh37 is an extra large bit of work. A discussion of the phylogenetic trees used in the alignment is included here.
Errata
The initial release of this track include a phylogenetic tree that had two small errors in it.
46way.nh
Namely: Baboon (papHam1) and Rhesus (rheMac2) were specified as separate nodes instead
of correctly sister species. The same problem is present for Wallaby (macEug1) and
Opossum (monDom5). The discussion below includes a corrected phylogenetic tree.
