|
|
(5 intermediate revisions by one other user not shown) |
Line 1: |
Line 1: |
| There are periodic updates to all Ensembl Genes tracks in all dbs.
| | This page is no longer maintained. |
| | |
| *A good script to run that checks many things is checkEnsembl.sh.
| |
| **This script doesn't even seem to be isntalled for me. Maybe it is worth investigating?
| |
| | |
| *An even better script (in that it runs) is qaEnsGenes.csh
| |
| **Run it '''before''' you push to beta, as it compares dev to beta. You'll lose that comparison if you push too soon. Not that I ever did that.
| |
| | |
| *All Ensembl builds are documented in the single file:
| |
| src/hg/makeDb/doc/makeEnsembl.txt
| |
| | |
| *You can find all ensembl gene builds in:
| |
| /hive/data/genomes/<db>/bed/ensGene.NN/
| |
| :where NN is the ensembl version number.
| |
| | |
| *To get the links to go to the correct place at Ensembl, you will have to check for the appropriate rows in trackVersion table in hgFixed database
| |
| **Basically, lines from trackVersion need to be copied over into the different hgFixed dbs as you go along.
| |
| ***You can also manipulate the dates so the current version says 'current'. However, that does not seem to be a rule. Look in hgFixed. You'll see.
| |
| | |
| | |
| [[Category:Browser QA tracks]]
| |
Latest revision as of 19:32, 10 March 2011
This page is no longer maintained.