Hg38 100-way Genome size statistics: Difference between revisions

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Line 53: Line 53:
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AACZ03 Chimp]</TD><TH ALIGN=CENTER>6X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AACZ03 Chimp]</TD><TH ALIGN=CENTER>6X</TH>
<TH ALIGN=CENTER>143986469</TH>
<TH ALIGN=CENTER>143986469</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>93.112%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>93.112%</TD>
<TD ALIGN=RIGHT>5000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
Line 62: Line 62:
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=CABD02 Gorilla]</TD><TH ALIGN=CENTER>2.1X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=CABD02 Gorilla]</TD><TH ALIGN=CENTER>2.1X</TH>
<TH ALIGN=CENTER>145327772</TH>
<TH ALIGN=CENTER>145327772</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>88.005%</TD>
   <TD ALIGN=CENTER>RecipBest</TD><TD ALIGN=RIGHT>88.005%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
Line 71: Line 71:
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ABGA00 Orangutan]</TD><TH ALIGN=CENTER>6X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ABGA00 Orangutan]</TD><TH ALIGN=CENTER>6X</TH>
<TH ALIGN=CENTER>135191526</TH>
<TH ALIGN=CENTER>135191526</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>89.187%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>89.187%</TD>
<TD ALIGN=RIGHT>5000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
Line 80: Line 80:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Nomascus_leucogenys/Nleu_3.0/ Gibbon]</TD><TH ALIGN=CENTER>5.6X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Nomascus_leucogenys/Nleu_3.0/ Gibbon]</TD><TH ALIGN=CENTER>5.6X</TH>
<TH ALIGN=CENTER>117381234</TH>
<TH ALIGN=CENTER>117381234</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>86.379%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>86.379%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000364345.1/ 06]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macFas5 macFas5]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/assembly/310688/ 06]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac3 rheMac3]</TH>
<TH ALIGN=RIGHT>34,103</TH>
  <TD ALIGN=RIGHT>2,969,988,180</TD><TD ALIGN=RIGHT>2,639,145,830</TD>
  <TD ALIGN=RIGHT>330,842,350</TD><TD ALIGN=RIGHT>%&nbsp;48.54</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AEHK01 Rhesus]</TD><TH ALIGN=CENTER>50X</TH>
<TH ALIGN=CENTER>150158102</TH>
  <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>80.828%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000364345.1/ 07]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macFas5 macFas5]</TH>
<TH ALIGN=RIGHT>7,601</TH>
<TH ALIGN=RIGHT>7,601</TH>
   <TD ALIGN=RIGHT>2,946,843,737</TD><TD ALIGN=RIGHT>2,803,866,385</TD>
   <TD ALIGN=RIGHT>2,946,843,737</TD><TD ALIGN=RIGHT>2,803,866,385</TD>
Line 89: Line 98:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Macaca_fascicularis/Macaca_fascicularis_5.0/ Crab-eating macaque]</TD><TH ALIGN=CENTER>68X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Macaca_fascicularis/Macaca_fascicularis_5.0/ Crab-eating macaque]</TD><TH ALIGN=CENTER>68X</TH>
<TH ALIGN=CENTER>152835861</TH>
<TH ALIGN=CENTER>152835861</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>85.675%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>85.675%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/assembly/310688/ 07]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac3 rheMac3]</TH>
<TH ALIGN=RIGHT>34,103</TH>
  <TD ALIGN=RIGHT>2,969,988,180</TD><TD ALIGN=RIGHT>2,639,145,830</TD>
  <TD ALIGN=RIGHT>330,842,350</TD><TD ALIGN=RIGHT>%&nbsp;48.54</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AEHK01 Rhesus]</TD><TH ALIGN=CENTER>50X</TH>
<TH ALIGN=CENTER>150158102</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>79.729%</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/54005 08]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=papAnu2 papAnu2]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/54005 08]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=papAnu2 papAnu2]</TH>
Line 107: Line 107:
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AHZZ01 Baboon]</TD><TH ALIGN=CENTER>85X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AHZZ01 Baboon]</TD><TH ALIGN=CENTER>85X</TH>
<TH ALIGN=CENTER>139646187</TH>
<TH ALIGN=CENTER>139646187</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>84.179%</TD>
   <TH ALIGN=CENTER>RecipBest</TH><TD ALIGN=RIGHT>84.179%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/67945 09]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=saiBol1 saiBol1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/PRJNA168621 09]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlSab2 chlSab2]</TH>
<TH ALIGN=RIGHT>2,685</TH>
  <TD ALIGN=RIGHT>2,608,572,064</TD><TD ALIGN=RIGHT>2,477,131,095</TD>
  <TD ALIGN=RIGHT>131,440,969</TD><TD ALIGN=RIGHT>%&nbsp;46.69</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AGCE01 Squirrel monkey]</TD><TH ALIGN=CENTER>80X</TH>
<TH ALIGN=CENTER>18744880</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>70.565%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/PRJNA168621 10]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlSab2 chlSab2]</TH>
<TH ALIGN=RIGHT>2,004</TH>
<TH ALIGN=RIGHT>2,004</TH>
   <TD ALIGN=RIGHT>2,789,656,328</TD><TD ALIGN=RIGHT>2,752,000,999</TD>
   <TD ALIGN=RIGHT>2,789,656,328</TD><TD ALIGN=RIGHT>2,752,000,999</TD>
Line 125: Line 116:
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AQIB01 Green monkey]</TD><TH ALIGN=CENTER>95X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AQIB01 Green monkey]</TD><TH ALIGN=CENTER>95X</TH>
<TH ALIGN=CENTER>101219884</TH>
<TH ALIGN=CENTER>101219884</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>84.393%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>84.393%</TD>
<TD ALIGN=RIGHT>5000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://genome.wustl.edu/genomes/view/callithrix_jacchus/ 11]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calJac3 calJac3]</TH>
<TR><TH ALIGN=RIGHT>[http://genome.wustl.edu/genomes/view/callithrix_jacchus/ 10]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calJac3 calJac3]</TH>
<TH ALIGN=RIGHT>14,205</TH>
<TH ALIGN=RIGHT>14,205</TH>
   <TD ALIGN=RIGHT>2,914,958,544</TD><TD ALIGN=RIGHT>2,752,505,800</TD>
   <TD ALIGN=RIGHT>2,914,958,544</TD><TD ALIGN=RIGHT>2,752,505,800</TD>
Line 134: Line 125:
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ACFV00 Marmoset]</TD><TH ALIGN=CENTER>6X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ACFV00 Marmoset]</TD><TH ALIGN=CENTER>6X</TH>
<TH ALIGN=CENTER>132174527</TH>
<TH ALIGN=CENTER>132174527</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>71.709%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>71.709%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000298275.1/ 12]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryAfe1 oryAfe1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/67945 11]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=saiBol1 saiBol1]</TH>
<TH ALIGN=RIGHT>22,509</TH>
<TH ALIGN=RIGHT>2,685</TH>
   <TD ALIGN=RIGHT>4,444,080,527</TD><TD ALIGN=RIGHT>3,415,340,621</TD>
   <TD ALIGN=RIGHT>2,608,572,064</TD><TD ALIGN=RIGHT>2,477,131,095</TD>
   <TD ALIGN=RIGHT>1,028,739,906</TD><TD ALIGN=RIGHT>%&nbsp;31.09</TD>
   <TD ALIGN=RIGHT>131,440,969</TD><TD ALIGN=RIGHT>%&nbsp;46.69</TD>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Orycteropus_afer/OryAfe1.0/ Aardvark]</TD><TH ALIGN=CENTER>44X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AGCE01 Squirrel monkey]</TD><TH ALIGN=CENTER>80X</TH>
<TH ALIGN=CENTER>7875832</TH>
<TH ALIGN=CENTER>18744880</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>36.526%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>70.565%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/assembly/249878/ 13]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=otoGar3 otoGar3]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/assembly/249878/ 12]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=otoGar3 otoGar3]</TH>
<TH ALIGN=RIGHT>7,793</TH>
<TH ALIGN=RIGHT>7,793</TH>
   <TD ALIGN=RIGHT>2,519,724,550</TD><TD ALIGN=RIGHT>2,359,530,453</TD>
   <TD ALIGN=RIGHT>2,519,724,550</TD><TD ALIGN=RIGHT>2,359,530,453</TD>
Line 152: Line 143:
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAQR03 Bushbaby]</TD><TH ALIGN=CENTER>137X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAQR03 Bushbaby]</TD><TH ALIGN=CENTER>137X</TH>
<TH ALIGN=CENTER>13852661</TH>
<TH ALIGN=CENTER>13852661</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>49.485%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>53.196%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000334495.1/ 13]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tupChi1 tupChi1]</TH>
<TH ALIGN=RIGHT>50,750</TH>
  <TD ALIGN=RIGHT>2,846,580,235</TD><TD ALIGN=RIGHT>2,706,389,135</TD>
  <TD ALIGN=RIGHT>140,191,100</TD><TD ALIGN=RIGHT>%&nbsp;40.02</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Tupaia_chinensis/TupChi_1.0/ Chinese tree shrew]</TD><TH ALIGN=CENTER>80X</TH>
<TH ALIGN=CENTER>3670124</TH>
  <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>45.256%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/assembly/317808/ 14]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=speTri2 speTri2]</TH>
<TH ALIGN=RIGHT>12,483</TH>
  <TD ALIGN=RIGHT>2,478,393,770</TD><TD ALIGN=RIGHT>2,311,060,300</TD>
  <TD ALIGN=RIGHT>167,333,470</TD><TD ALIGN=RIGHT>%&nbsp;36.27</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AGTP01 Squirrel]</TD><TH ALIGN=CENTER>495X</TH>
<TH ALIGN=CENTER>8192786</TH>
  <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>48.283%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000280705.1/ 15]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=jacJac1 jacJac1]</TH>
<TH ALIGN=RIGHT>10,896</TH>
  <TD ALIGN=RIGHT>2,835,242,767</TD><TD ALIGN=RIGHT>2,470,259,869</TD>
  <TD ALIGN=RIGHT>364,982,898</TD><TD ALIGN=RIGHT>%&nbsp;37.29</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Jaculus_jaculus/JacJac1.0/ Lesser Egyptian jerboa]</TD><TH ALIGN=CENTER>78X</TH>
<TH ALIGN=CENTER>22080993</TH>
  <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>34.153%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000317375.1/ 16]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micOch1 micOch1]</TH>
<TH ALIGN=RIGHT>6,335</TH>
  <TD ALIGN=RIGHT>2,287,340,943</TD><TD ALIGN=RIGHT>2,104,321,675</TD>
  <TD ALIGN=RIGHT>183,019,268</TD><TD ALIGN=RIGHT>%&nbsp;23.89</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Microtus_ochrogaster/MicOch1.0/ Prairie vole]</TD><TH ALIGN=CENTER>94X</TH>
<TH ALIGN=CENTER>61813736</TH>
  <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>31.489%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000419365.1/ 17]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=criGri1 criGri1]</TH>
<TH ALIGN=RIGHT>52,711</TH>
  <TD ALIGN=RIGHT>2,360,146,428</TD><TD ALIGN=RIGHT>2,301,325,917</TD>
  <TD ALIGN=RIGHT>58,820,511</TD><TD ALIGN=RIGHT>%&nbsp;27.06</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Cricetulus_griseus/C_griseus_v1.0/ Chinese hamster]</TD><TH ALIGN=CENTER>130X</TH>
<TH ALIGN=CENTER>1558295</TH>
  <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>33.169%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000349665.1/ 18]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesAur1 mesAur1]</TH>
<TH ALIGN=RIGHT>21,484</TH>
  <TD ALIGN=RIGHT>2,504,925,039</TD><TD ALIGN=RIGHT>2,076,176,254</TD>
  <TD ALIGN=RIGHT>428,748,785</TD><TD ALIGN=RIGHT>%&nbsp;25.70</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Mesocricetus_auratus/MesAur1.0/ Golden hamster]</TD><TH ALIGN=CENTER>115X</TH>
<TH ALIGN=CENTER>12753307</TH>
  <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>30.803%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/assembly/327618/ 19]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm10 mm10]</TH>
<TH ALIGN=RIGHT>66</TH>
  <TD ALIGN=RIGHT>2,730,871,774</TD><TD ALIGN=RIGHT>2,652,783,500</TD>
  <TD ALIGN=RIGHT>78,088,274</TD><TD ALIGN=RIGHT>%&nbsp;45.18</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/bioproject/51977 Mouse]</TD><TH ALIGN=CENTER>20X</TH>
<TH ALIGN=CENTER>130694993</TH>
  <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>31.653%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000001895.4 20]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn6 rn6]</TH>
<TH ALIGN=RIGHT>953</TH>
  <TD ALIGN=RIGHT>2,870,182,909</TD><TD ALIGN=RIGHT>2,729,860,805</TD>
  <TD ALIGN=RIGHT>140,322,104</TD><TD ALIGN=RIGHT>%&nbsp;43.31</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AABR07 Rat]</TD><TH ALIGN=CENTER>10X</TH>
<TH ALIGN=CENTER>145729302</TH>
  <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>31.077%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/72441 21]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetGla2 hetGla2]</TH>
<TH ALIGN=RIGHT>4,229</TH>
  <TD ALIGN=RIGHT>2,618,204,639</TD><TD ALIGN=RIGHT>2,314,771,103</TD>
  <TD ALIGN=RIGHT>303,433,536</TD><TD ALIGN=RIGHT>%&nbsp;32.31</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AHKG01 Naked mole-rat]</TD><TH ALIGN=CENTER>90X</TH>
<TH ALIGN=CENTER>20532749</TH>
  <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>46.248%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000283155.1/ 14]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cerSim1 cerSim1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/assembly/304568/ 22]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cavPor3 cavPor3]</TH>
<TH ALIGN=RIGHT>3,087</TH>
<TH ALIGN=RIGHT>3,144</TH>
   <TD ALIGN=RIGHT>2,464,367,180</TD><TD ALIGN=RIGHT>2,366,858,012</TD>
   <TD ALIGN=RIGHT>2,723,219,641</TD><TD ALIGN=RIGHT>2,663,369,733</TD>
   <TD ALIGN=RIGHT>97,509,168</TD><TD ALIGN=RIGHT>%&nbsp;38.80</TD>
   <TD ALIGN=RIGHT>59,849,908</TD><TD ALIGN=RIGHT>%&nbsp;27.53</TD>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Ceratotherium_simum/CerSimSim1.0/ White rhinoceros]</TD><TH ALIGN=CENTER>91X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAKN02 Guinea pig]</TD><TH ALIGN=CENTER>6.76X</TH>
<TH ALIGN=CENTER>26277727</TH>
<TH ALIGN=CENTER>27942054</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>53.075%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>42.371%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000296735.1/ 15]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrAsi1 chrAsi1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000276665.1/ 23]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chiLan1 chiLan1]</TH>
<TH ALIGN=RIGHT>20,500</TH>
<TH ALIGN=RIGHT>2,838</TH>
   <TD ALIGN=RIGHT>4,210,110,458</TD><TD ALIGN=RIGHT>3,363,564,316</TD>
   <TD ALIGN=RIGHT>2,390,852,391</TD><TD ALIGN=RIGHT>2,284,276,400</TD>
   <TD ALIGN=RIGHT>846,546,142</TD><TD ALIGN=RIGHT>%&nbsp;20.11</TD>
   <TD ALIGN=RIGHT>106,575,991</TD><TD ALIGN=RIGHT>%&nbsp;30.82</TD>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Chrysochloris_asiatica/ChrAsi1.0/ Cape golden mole]</TD><TH ALIGN=CENTER>66X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Chinchilla_lanigera/ChiLan1.0/ Chinchilla]</TD><TH ALIGN=CENTER>87X</TH>
<TH ALIGN=CENTER>13470186</TH>
<TH ALIGN=CENTER>21893125</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>29.208%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>45.665%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000308155.1/ 16]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eptFus1 eptFus1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000260255.1/ 24]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=octDeg1 octDeg1]</TH>
<TH ALIGN=RIGHT>6,788</TH>
<TH ALIGN=RIGHT>7,134</TH>
   <TD ALIGN=RIGHT>2,026,627,185</TD><TD ALIGN=RIGHT>1,811,378,799</TD>
   <TD ALIGN=RIGHT>2,995,882,938</TD><TD ALIGN=RIGHT>2,526,254,692</TD>
   <TD ALIGN=RIGHT>215,248,386</TD><TD ALIGN=RIGHT>%&nbsp;24.11</TD>
   <TD ALIGN=RIGHT>469,628,246</TD><TD ALIGN=RIGHT>%&nbsp;26.47</TD>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Eptesicus_fuscus/EptFus1.0/ Big brown bat]</TD><TH ALIGN=CENTER>84X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Octodon_degus/OctDeg1.0/ Brush-tailed rat]</TD><TH ALIGN=CENTER>80X</TH>
<TH ALIGN=CENTER>13454942</TH>
<TH ALIGN=CENTER>12091372</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>36.386%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>40.238%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000334495.1/ 17]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tupChi1 tupChi1]</TH>
<TR><TH ALIGN=RIGHT>[ftp://ftp.broad.mit.edu/pub/assemblies/mammals/rabbit/oryCun2/ 25]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryCun2 oryCun2]</TH>
<TH ALIGN=RIGHT>50,750</TH>
<TH ALIGN=RIGHT>3,242</TH>
   <TD ALIGN=RIGHT>2,846,580,235</TD><TD ALIGN=RIGHT>2,706,389,135</TD>
   <TD ALIGN=RIGHT>2,737,490,501</TD><TD ALIGN=RIGHT>2,604,023,284</TD>
   <TD ALIGN=RIGHT>140,191,100</TD><TD ALIGN=RIGHT>%&nbsp;40.02</TD>
   <TD ALIGN=RIGHT>133,467,217</TD><TD ALIGN=RIGHT>%&nbsp;43.74</TD>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Tupaia_chinensis/TupChi_1.0/ Chinese tree shrew]</TD><TH ALIGN=CENTER>80X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAGW00 Rabbit]</TD><TH ALIGN=CENTER>6.51X</TH>
<TH ALIGN=CENTER>3670124</TH>
<TH ALIGN=CENTER>111795807</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>37.022%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>42.911%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/assembly/286598/ 18]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equCab2 equCab2]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000292845.1/ 26]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri3 ochPri3]</TH>
<TH ALIGN=RIGHT>34</TH>
<TH ALIGN=RIGHT>10,420</TH>
   <TD ALIGN=RIGHT>2,484,532,062</TD><TD ALIGN=RIGHT>2,428,790,173</TD>
   <TD ALIGN=RIGHT>2,229,835,716</TD><TD ALIGN=RIGHT>1,943,987,870</TD>
   <TD ALIGN=RIGHT>55,741,889</TD><TD ALIGN=RIGHT>%&nbsp;40.97</TD>
   <TD ALIGN=RIGHT>285,847,846</TD><TD ALIGN=RIGHT>%&nbsp;29.53</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAWR02 Horse]</TD><TH ALIGN=CENTER>6.8X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Ochotona_princeps/OchPri3.0/ Pika]</TD><TH ALIGN=CENTER>103X</TH>
<TH ALIGN=CENTER>91571448</TH>
<TH ALIGN=CENTER>26863993</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>52.083%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>33.618%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000311805.1/ 19]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=camFer1 camFer1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/13421 27]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=susScr3 susScr3]</TH>
<TH ALIGN=RIGHT>13,334</TH>
<TH ALIGN=RIGHT>4,583</TH>
   <TD ALIGN=RIGHT>2,009,194,609</TD><TD ALIGN=RIGHT>1,985,416,433</TD>
   <TD ALIGN=RIGHT>2,808,525,991</TD><TD ALIGN=RIGHT>2,518,987,191</TD>
   <TD ALIGN=RIGHT>23,778,176</TD><TD ALIGN=RIGHT>%&nbsp;33.32</TD>
   <TD ALIGN=RIGHT>289,538,800</TD><TD ALIGN=RIGHT>%&nbsp;44.30</TD>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Camelus_ferus/CB1/ Bactrian camel]</TD><TH ALIGN=CENTER>30X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AEMK01 Pig]</TD><TH ALIGN=CENTER>24X</TH>
<TH ALIGN=CENTER>2005940</TH>
<TH ALIGN=CENTER>148491826</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>46.206%</TD>
   <TH ALIGN=CENTER>RecipBest</TH><TD ALIGN=RIGHT>44.676%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000164845.2/ 20]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac2 vicPac2]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000164845.2/ 28]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac2 vicPac2]</TH>
<TH ALIGN=RIGHT>276,611</TH>
<TH ALIGN=RIGHT>276,611</TH>
   <TD ALIGN=RIGHT>2,172,177,994</TD><TD ALIGN=RIGHT>2,078,582,856</TD>
   <TD ALIGN=RIGHT>2,172,177,994</TD><TD ALIGN=RIGHT>2,078,582,856</TD>
Line 215: Line 287:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Vicugna_pacos/Vicugna_pacos-2.0.1/ Alpaca]</TD><TH ALIGN=CENTER>22X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Vicugna_pacos/Vicugna_pacos-2.0.1/ Alpaca]</TD><TH ALIGN=CENTER>22X</TH>
<TH ALIGN=CENTER>7263804</TH>
<TH ALIGN=CENTER>7263804</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>45.887%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>48.909%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000311805.1/ 29]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=camFer1 camFer1]</TH>
<TH ALIGN=RIGHT>13,334</TH>
  <TD ALIGN=RIGHT>2,009,194,609</TD><TD ALIGN=RIGHT>1,985,416,433</TD>
  <TD ALIGN=RIGHT>23,778,176</TD><TD ALIGN=RIGHT>%&nbsp;33.32</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Camelus_ferus/CB1/ Bactrian camel]</TD><TH ALIGN=CENTER>30X</TH>
<TH ALIGN=CENTER>2005940</TH>
  <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>49.095%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/20365 21]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=turTru2 turTru2]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/20365 30]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=turTru2 turTru2]</TH>
<TH ALIGN=RIGHT>240,901</TH>
<TH ALIGN=RIGHT>240,901</TH>
   <TD ALIGN=RIGHT>2,551,996,573</TD><TD ALIGN=RIGHT>2,332,402,443</TD>
   <TD ALIGN=RIGHT>2,551,996,573</TD><TD ALIGN=RIGHT>2,332,402,443</TD>
Line 224: Line 305:
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ABRN02 Dolphin]</TD><TH ALIGN=CENTER>3.5X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ABRN02 Dolphin]</TD><TH ALIGN=CENTER>3.5X</TH>
<TH ALIGN=CENTER>116261</TH>
<TH ALIGN=CENTER>116261</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>46.072%</TD>
   <TH ALIGN=CENTER>RecipBest</TH><TD ALIGN=RIGHT>49.728%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/85 22]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam3 canFam3]</TH>
<TH ALIGN=RIGHT>3,268</TH>
  <TD ALIGN=RIGHT>2,410,976,875</TD><TD ALIGN=RIGHT>2,392,715,236</TD>
  <TD ALIGN=RIGHT>18,261,639</TD><TD ALIGN=RIGHT>%&nbsp;43.01</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAEX00 Dog]</TD><TH ALIGN=CENTER>7.6X</TH>
<TH ALIGN=CENTER>63241923</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>49.978%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000331955.1/ 23]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=orcOrc1 orcOrc1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000331955.1/ 31]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=orcOrc1 orcOrc1]</TH>
<TH ALIGN=RIGHT>1,668</TH>
<TH ALIGN=RIGHT>1,668</TH>
   <TD ALIGN=RIGHT>2,372,919,877</TD><TD ALIGN=RIGHT>2,249,582,112</TD>
   <TD ALIGN=RIGHT>2,372,919,877</TD><TD ALIGN=RIGHT>2,249,582,112</TD>
Line 242: Line 314:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Orcinus_orca/Oorc_1.1/ Killer whale]</TD><TH ALIGN=CENTER>200X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Orcinus_orca/Oorc_1.1/ Killer whale]</TD><TH ALIGN=CENTER>200X</TH>
<TH ALIGN=CENTER>12735091</TH>
<TH ALIGN=CENTER>12735091</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>47.281%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>50.709%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/assembly/317808/ 24]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=speTri2 speTri2]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000400835.1/ 32]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panHod1 panHod1]</TH>
<TH ALIGN=RIGHT>12,483</TH>
<TH ALIGN=RIGHT>15,059</TH>
   <TD ALIGN=RIGHT>2,478,393,770</TD><TD ALIGN=RIGHT>2,311,060,300</TD>
   <TD ALIGN=RIGHT>2,696,886,330</TD><TD ALIGN=RIGHT>2,507,986,438</TD>
   <TD ALIGN=RIGHT>167,333,470</TD><TD ALIGN=RIGHT>%&nbsp;36.27</TD>
   <TD ALIGN=RIGHT>188,899,892</TD><TD ALIGN=RIGHT>%&nbsp;42.51</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AGTP01 Squirrel]</TD><TH ALIGN=CENTER>495X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Pantholops_hodgsonii/PHO1.0/ Tibetan antelope]</TD><TH ALIGN=CENTER>67X</TH>
<TH ALIGN=CENTER>8192786</TH>
<TH ALIGN=CENTER>2772860</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>44.729%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>45.619%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000325575.1/ 25]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteAle1 pteAle1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/189361 33]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau8 bosTau8]</TH>
<TH ALIGN=RIGHT>65,597</TH>
<TH ALIGN=RIGHT>3,179</TH>
   <TD ALIGN=RIGHT>1,985,958,707</TD><TD ALIGN=RIGHT>1,944,625,202</TD>
   <TD ALIGN=RIGHT>2,670,044,500</TD><TD ALIGN=RIGHT>2,649,304,231</TD>
   <TD ALIGN=RIGHT>41,333,505</TD><TD ALIGN=RIGHT>%&nbsp;32.56</TD>
   <TD ALIGN=RIGHT>20,740,269</TD><TD ALIGN=RIGHT>%&nbsp;48.69</TD>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Pteropus_alecto/ASM32557v1/ Black flying-fox]</TD><TH ALIGN=CENTER>110X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=DAAA02 Cow]</TD><TH ALIGN=CENTER>9X</TH>
<TH ALIGN=CENTER>15954802</TH>
<TH ALIGN=CENTER>105708250</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>45.612%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>45.975%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/13421 26]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=susScr3 susScr3]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000298735.1/ 34]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oviAri3 oviAri3]</TH>
<TH ALIGN=RIGHT>4,583</TH>
<TH ALIGN=RIGHT>5,698</TH>
   <TD ALIGN=RIGHT>2,808,525,991</TD><TD ALIGN=RIGHT>2,518,987,191</TD>
   <TD ALIGN=RIGHT>2,619,054,388</TD><TD ALIGN=RIGHT>2,534,335,866</TD>
   <TD ALIGN=RIGHT>289,538,800</TD><TD ALIGN=RIGHT>%&nbsp;44.30</TD>
   <TD ALIGN=RIGHT>84,718,522</TD><TD ALIGN=RIGHT>%&nbsp;45.18</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AEMK01 Pig]</TD><TH ALIGN=CENTER>24X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Ovis_aries/Oar_v3.1/ Sheep]</TD><TH ALIGN=CENTER>142X</TH>
<TH ALIGN=CENTER>148491826</TH>
<TH ALIGN=CENTER>100079507</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>41.326%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>45.352%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.broadinstitute.org/science/projects/mammals-models/elephant/elephant 27]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr3 loxAfr3]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000317765.1/ 35]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=capHir1 capHir1]</TH>
<TH ALIGN=RIGHT>2,353</TH>
<TH ALIGN=RIGHT>77,021</TH>
   <TD ALIGN=RIGHT>3,196,760,833</TD><TD ALIGN=RIGHT>3,118,565,340</TD>
   <TD ALIGN=RIGHT>2,635,848,900</TD><TD ALIGN=RIGHT>2,495,939,845</TD>
   <TD ALIGN=RIGHT>78,195,493</TD><TD ALIGN=RIGHT>%&nbsp;47.63</TD>
   <TD ALIGN=RIGHT>139,909,055</TD><TD ALIGN=RIGHT>%&nbsp;43.55</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAGU00 Elephant]</TD><TH ALIGN=CENTER>7X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Capra_hircus/CHIR_1.0/ Domestic goat]</TD><TH ALIGN=CENTER>86.64X</TH>
<TH ALIGN=CENTER>46401353</TH>
<TH ALIGN=CENTER>92306894</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>41.904%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>45.257%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/72441 28]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetGla2 hetGla2]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/assembly/286598/ 36]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equCab2 equCab2]</TH>
<TH ALIGN=RIGHT>4,229</TH>
<TH ALIGN=RIGHT>34</TH>
   <TD ALIGN=RIGHT>2,618,204,639</TD><TD ALIGN=RIGHT>2,314,771,103</TD>
   <TD ALIGN=RIGHT>2,484,532,062</TD><TD ALIGN=RIGHT>2,428,790,173</TD>
   <TD ALIGN=RIGHT>303,433,536</TD><TD ALIGN=RIGHT>%&nbsp;32.31</TD>
   <TD ALIGN=RIGHT>55,741,889</TD><TD ALIGN=RIGHT>%&nbsp;40.97</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AHKG01 Naked mole-rat]</TD><TH ALIGN=CENTER>90X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAWR02 Horse]</TD><TH ALIGN=CENTER>6.8X</TH>
<TH ALIGN=CENTER>20532749</TH>
<TH ALIGN=CENTER>91571448</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>42.315%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>55.459%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[ftp://ftp.broad.mit.edu/pub/assemblies/mammals/megabat/Ptevap1.0/ 29]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteVam1 pteVam1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000283155.1/ 37]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cerSim1 cerSim1]</TH>
<TH ALIGN=RIGHT>96,944</TH>
<TH ALIGN=RIGHT>3,087</TH>
   <TD ALIGN=RIGHT>1,996,076,410</TD><TD ALIGN=RIGHT>1,839,436,660</TD>
   <TD ALIGN=RIGHT>2,464,367,180</TD><TD ALIGN=RIGHT>2,366,858,012</TD>
   <TD ALIGN=RIGHT>156,639,750</TD><TD ALIGN=RIGHT>%&nbsp;31.75</TD>
   <TD ALIGN=RIGHT>97,509,168</TD><TD ALIGN=RIGHT>%&nbsp;38.80</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ABRP00 Megabat]</TD><TH ALIGN=CENTER>2X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Ceratotherium_simum/CerSimSim1.0/ White rhinoceros]</TD><TH ALIGN=CENTER>91X</TH>
<TH ALIGN=CENTER>124060</TH>
<TH ALIGN=CENTER>26277727</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>41.012%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>56.633%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Felis_catus/all_assembly_versions/GCA_000181335.3_Felis_catus_8.0/ 30]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat8 felCat8]</TH>
<TR><TH ALIGN=RIGHT>[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Felis_catus/all_assembly_versions/GCA_000181335.3_Felis_catus_8.0/ 38]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat8 felCat8]</TH>
<TH ALIGN=RIGHT>267,625</TH>
<TH ALIGN=RIGHT>267,625</TH>
   <TD ALIGN=RIGHT>2,641,342,258</TD><TD ALIGN=RIGHT>2,599,700,169</TD>
   <TD ALIGN=RIGHT>2,641,342,258</TD><TD ALIGN=RIGHT>2,599,700,169</TD>
Line 305: Line 377:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Felis_catus/all_assembly_versions/GCA_000181335.3_Felis_catus_8.0/ Cat]</TD><TH ALIGN=CENTER>20X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Felis_catus/all_assembly_versions/GCA_000181335.3_Felis_catus_8.0/ Cat]</TD><TH ALIGN=CENTER>20X</TH>
<TH ALIGN=CENTER>142431058</TH>
<TH ALIGN=CENTER>142431058</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>47.700%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>51.684%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[ftp://ftp.ncbi.nlm.nih.gov:genbank/genomes/Eukaryotes/vertebrates_mammals/Ailuropoda_melanoleuca/AilMel_1.0/ 31]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ailMel1 ailMel1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/85 39]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam3 canFam3]</TH>
<TH ALIGN=RIGHT>81,467</TH>
<TH ALIGN=RIGHT>3,268</TH>
   <TD ALIGN=RIGHT>2,299,509,015</TD><TD ALIGN=RIGHT>2,245,312,831</TD>
   <TD ALIGN=RIGHT>2,410,976,875</TD><TD ALIGN=RIGHT>2,392,715,236</TD>
   <TD ALIGN=RIGHT>54,196,184</TD><TD ALIGN=RIGHT>%&nbsp;38.96</TD>
   <TD ALIGN=RIGHT>18,261,639</TD><TD ALIGN=RIGHT>%&nbsp;43.01</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ACTA00 Panda]</TD><TH ALIGN=CENTER>73X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAEX00 Dog]</TD><TH ALIGN=CENTER>7.6X</TH>
<TH ALIGN=CENTER>1281781</TH>
<TH ALIGN=CENTER>63241923</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>48.226%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>50.395%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000215625.1 32]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=musFur1 musFur1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000215625.1 40]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=musFur1 musFur1]</TH>
<TH ALIGN=RIGHT>7,741</TH>
<TH ALIGN=RIGHT>7,741</TH>
   <TD ALIGN=RIGHT>2,410,758,013</TD><TD ALIGN=RIGHT>2,277,906,570</TD>
   <TD ALIGN=RIGHT>2,410,758,013</TD><TD ALIGN=RIGHT>2,277,906,570</TD>
Line 323: Line 395:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Mustela_putorius/MusPutFur1.0/ Ferret ]</TD><TH ALIGN=CENTER>162X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Mustela_putorius/MusPutFur1.0/ Ferret ]</TD><TH ALIGN=CENTER>162X</TH>
<TH ALIGN=CENTER>9335154</TH>
<TH ALIGN=CENTER>9335154</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>45.782%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>49.631%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/assembly/304568/ 33]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cavPor3 cavPor3]</TH>
<TR><TH ALIGN=RIGHT>[ftp://ftp.ncbi.nlm.nih.gov:genbank/genomes/Eukaryotes/vertebrates_mammals/Ailuropoda_melanoleuca/AilMel_1.0/ 41]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ailMel1 ailMel1]</TH>
<TH ALIGN=RIGHT>3,144</TH>
<TH ALIGN=RIGHT>81,467</TH>
   <TD ALIGN=RIGHT>2,723,219,641</TD><TD ALIGN=RIGHT>2,663,369,733</TD>
   <TD ALIGN=RIGHT>2,299,509,015</TD><TD ALIGN=RIGHT>2,245,312,831</TD>
   <TD ALIGN=RIGHT>59,849,908</TD><TD ALIGN=RIGHT>%&nbsp;27.53</TD>
   <TD ALIGN=RIGHT>54,196,184</TD><TD ALIGN=RIGHT>%&nbsp;38.96</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAKN02 Guinea pig]</TD><TH ALIGN=CENTER>6.76X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ACTA00 Panda]</TD><TH ALIGN=CENTER>73X</TH>
<TH ALIGN=CENTER>27942054</TH>
<TH ALIGN=CENTER>1281781</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>37.901%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>48.226%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/12594 34]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dasNov3 dasNov3]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000321225.1/ 42]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=odoRosDiv1 odoRosDiv1]</TH>
<TH ALIGN=RIGHT>46,559</TH>
<TH ALIGN=RIGHT>3,892</TH>
  <TD ALIGN=RIGHT>3,631,522,711</TD><TD ALIGN=RIGHT>3,299,882,028</TD>
   <TD ALIGN=RIGHT>2,400,133,628</TD><TD ALIGN=RIGHT>2,300,235,509</TD>
  <TD ALIGN=RIGHT>331,640,683</TD><TD ALIGN=RIGHT>%&nbsp;49.28</TD>
   <TD ALIGN=RIGHT>99,898,119</TD><TD ALIGN=RIGHT>%&nbsp;40.52</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAGV03 Armadillo]</TD><TH ALIGN=CENTER>6X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Odobenus_rosmarus/Oros_1.0/ Pacific walrus]</TD><TH ALIGN=CENTER>200X</TH>
<TH ALIGN=CENTER>1687935</TH>
<TH ALIGN=CENTER>2616778</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>42.233%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>52.193%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[ftp://ftp.broad.mit.edu/pub/assemblies/mammals/rabbit/oryCun2/ 35]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryCun2 oryCun2]</TH>
<TH ALIGN=RIGHT>3,242</TH>
   <TD ALIGN=RIGHT>2,737,490,501</TD><TD ALIGN=RIGHT>2,604,023,284</TD>
   <TD ALIGN=RIGHT>133,467,217</TD><TD ALIGN=RIGHT>%&nbsp;43.74</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAGW00 Rabbit]</TD><TH ALIGN=CENTER>6.51X</TH>
<TH ALIGN=CENTER>111795807</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>38.631%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000400835.1/ 36]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panHod1 panHod1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000349705.1/ 43]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepWed1 lepWed1]</TH>
<TH ALIGN=RIGHT>15,059</TH>
  <TD ALIGN=RIGHT>2,696,886,330</TD><TD ALIGN=RIGHT>2,507,986,438</TD>
  <TD ALIGN=RIGHT>188,899,892</TD><TD ALIGN=RIGHT>%&nbsp;42.51</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Pantholops_hodgsonii/PHO1.0/ Tibetan antelope]</TD><TH ALIGN=CENTER>67X</TH>
<TH ALIGN=CENTER>2772860</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>41.357%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000349705.1/ 37]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepWed1 lepWed1]</TH>
<TH ALIGN=RIGHT>16,711</TH>
<TH ALIGN=RIGHT>16,711</TH>
   <TD ALIGN=RIGHT>3,156,902,762</TD><TD ALIGN=RIGHT>2,223,164,129</TD>
   <TD ALIGN=RIGHT>3,156,902,762</TD><TD ALIGN=RIGHT>2,223,164,129</TD>
Line 368: Line 422:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Leptonychotes_weddellii/LepWed1.0/ Weddell seal]</TD><TH ALIGN=CENTER>82X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Leptonychotes_weddellii/LepWed1.0/ Weddell seal]</TD><TH ALIGN=CENTER>82X</TH>
<TH ALIGN=CENTER>904031</TH>
<TH ALIGN=CENTER>904031</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>47.437%</TD>
   <TH ALIGN=CENTER>RecipBest</TH><TD ALIGN=RIGHT>51.073%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000321225.1/ 38]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=odoRosDiv1 odoRosDiv1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000325575.1/ 44]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteAle1 pteAle1]</TH>
<TH ALIGN=RIGHT>3,892</TH>
<TH ALIGN=RIGHT>65,597</TH>
   <TD ALIGN=RIGHT>2,400,133,628</TD><TD ALIGN=RIGHT>2,300,235,509</TD>
  <TD ALIGN=RIGHT>1,985,958,707</TD><TD ALIGN=RIGHT>1,944,625,202</TD>
   <TD ALIGN=RIGHT>99,898,119</TD><TD ALIGN=RIGHT>%&nbsp;40.52</TD>
  <TD ALIGN=RIGHT>41,333,505</TD><TD ALIGN=RIGHT>%&nbsp;32.56</TD>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Odobenus_rosmarus/Oros_1.0/ Pacific walrus]</TD><TH ALIGN=CENTER>200X</TH>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Pteropus_alecto/ASM32557v1/ Black flying-fox]</TD><TH ALIGN=CENTER>110X</TH>
<TH ALIGN=CENTER>2616778</TH>
<TH ALIGN=CENTER>15954802</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>47.985%</TD>
  <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>48.281%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[ftp://ftp.broad.mit.edu/pub/assemblies/mammals/megabat/Ptevap1.0/ 45]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteVam1 pteVam1]</TH>
<TH ALIGN=RIGHT>96,944</TH>
  <TD ALIGN=RIGHT>1,996,076,410</TD><TD ALIGN=RIGHT>1,839,436,660</TD>
  <TD ALIGN=RIGHT>156,639,750</TD><TD ALIGN=RIGHT>%&nbsp;31.75</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ABRP00 Megabat]</TD><TH ALIGN=CENTER>2X</TH>
<TH ALIGN=CENTER>124060</TH>
  <TD ALIGN=CENTER>RecipBest</TD><TD ALIGN=RIGHT>43.924%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000308155.1/ 46]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eptFus1 eptFus1]</TH>
<TH ALIGN=RIGHT>6,788</TH>
   <TD ALIGN=RIGHT>2,026,627,185</TD><TD ALIGN=RIGHT>1,811,378,799</TD>
   <TD ALIGN=RIGHT>215,248,386</TD><TD ALIGN=RIGHT>%&nbsp;24.11</TD>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Eptesicus_fuscus/EptFus1.0/ Big brown bat]</TD><TH ALIGN=CENTER>84X</TH>
<TH ALIGN=CENTER>13454942</TH>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>39.123%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000327345.1/ 39]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoDav1 myoDav1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000327345.1/ 47]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoDav1 myoDav1]</TH>
<TH ALIGN=RIGHT>101,769</TH>
<TH ALIGN=RIGHT>101,769</TH>
   <TD ALIGN=RIGHT>2,059,799,708</TD><TD ALIGN=RIGHT>1,878,461,987</TD>
   <TD ALIGN=RIGHT>2,059,799,708</TD><TD ALIGN=RIGHT>1,878,461,987</TD>
Line 386: Line 458:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Myotis_davidii/ASM32734v1/ David's myotis (bat)]</TD><TH ALIGN=CENTER>110X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Myotis_davidii/ASM32734v1/ David's myotis (bat)]</TD><TH ALIGN=CENTER>110X</TH>
<TH ALIGN=CENTER>3454484</TH>
<TH ALIGN=CENTER>3454484</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>34.892%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>38.713%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/189361 40]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau8 bosTau8]</TH>
<TH ALIGN=RIGHT>3,179</TH>
  <TD ALIGN=RIGHT>2,670,044,500</TD><TD ALIGN=RIGHT>2,649,304,231</TD>
  <TD ALIGN=RIGHT>20,740,269</TD><TD ALIGN=RIGHT>%&nbsp;48.69</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=DAAA02 Cow]</TD><TH ALIGN=CENTER>9X</TH>
<TH ALIGN=CENTER>105708250</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>45.975%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000317765.1/ 41]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=capHir1 capHir1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/614 48]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoLuc2 myoLuc2]</TH>
<TH ALIGN=RIGHT>77,021</TH>
  <TD ALIGN=RIGHT>2,635,848,900</TD><TD ALIGN=RIGHT>2,495,939,845</TD>
  <TD ALIGN=RIGHT>139,909,055</TD><TD ALIGN=RIGHT>%&nbsp;43.55</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Capra_hircus/CHIR_1.0/ Domestic goat]</TD><TH ALIGN=CENTER>86.64X</TH>
<TH ALIGN=CENTER>92306894</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000298735.1/ 42]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oviAri3 oviAri3]</TH>
<TH ALIGN=RIGHT>5,698</TH>
  <TD ALIGN=RIGHT>2,619,054,388</TD><TD ALIGN=RIGHT>2,534,335,866</TD>
  <TD ALIGN=RIGHT>84,718,522</TD><TD ALIGN=RIGHT>%&nbsp;45.18</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Ovis_aries/Oar_v3.1/ Sheep]</TD><TH ALIGN=CENTER>142X</TH>
<TH ALIGN=CENTER>100079507</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>41.193%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/614 43]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoLuc2 myoLuc2]</TH>
<TH ALIGN=RIGHT>11,654</TH>
<TH ALIGN=RIGHT>11,654</TH>
   <TD ALIGN=RIGHT>2,034,575,300</TD><TD ALIGN=RIGHT>1,966,419,868</TD>
   <TD ALIGN=RIGHT>2,034,575,300</TD><TD ALIGN=RIGHT>1,966,419,868</TD>
Line 422: Line 467:
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ABVD00 Microbat]</TD><TH ALIGN=CENTER>2.18X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ABVD00 Microbat]</TD><TH ALIGN=CENTER>2.18X</TH>
<TH ALIGN=CENTER>4293315</TH>
<TH ALIGN=CENTER>4293315</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>35.148%</TD>
   <TD ALIGN=CENTER>SyntenicNet</TD><TD ALIGN=RIGHT>38.591%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000299155.1/ 44]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eleEdw1 eleEdw1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000296755.1/ 49]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eriEur2 eriEur2]</TH>
<TH ALIGN=RIGHT>5,803</TH>
  <TD ALIGN=RIGHT>2,715,720,925</TD><TD ALIGN=RIGHT>2,333,073,535</TD>
  <TD ALIGN=RIGHT>382,647,390</TD><TD ALIGN=RIGHT>%&nbsp;45.60</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Erinaceus_europaeus/EriEur2.0/ Hedgehog]</TD><TH ALIGN=CENTER>79X</TH>
<TH ALIGN=CENTER>3264618</TH>
  <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>25.488%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000181275.2/ 50]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sorAra2 sorAra2]</TH>
<TH ALIGN=RIGHT>12,845</TH>
  <TD ALIGN=RIGHT>2,423,158,183</TD><TD ALIGN=RIGHT>2,192,103,426</TD>
  <TD ALIGN=RIGHT>231,054,757</TD><TD ALIGN=RIGHT>%&nbsp;32.76</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Sorex_araneus/SorAra2.0/ Shrew]</TD><TH ALIGN=CENTER>120X</TH>
<TH ALIGN=CENTER>22794405</TH>
  <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>26.905%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000260355.1/ 51]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=conCri1 conCri1]</TH>
<TH ALIGN=RIGHT>2,038</TH>
  <TD ALIGN=RIGHT>1,769,657,897</TD><TD ALIGN=RIGHT>1,682,542,007</TD>
  <TD ALIGN=RIGHT>87,115,890</TD><TD ALIGN=RIGHT>%&nbsp;18.21</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Condylura_cristata/ConCri1.0/ Star-nosed mole]</TD><TH ALIGN=CENTER>113.1X</TH>
<TH ALIGN=CENTER>55520359</TH>
  <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>35.911%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.broadinstitute.org/science/projects/mammals-models/elephant/elephant 52]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr3 loxAfr3]</TH>
<TH ALIGN=RIGHT>2,353</TH>
  <TD ALIGN=RIGHT>3,196,760,833</TD><TD ALIGN=RIGHT>3,118,565,340</TD>
  <TD ALIGN=RIGHT>78,195,493</TD><TD ALIGN=RIGHT>%&nbsp;47.63</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAGU00 Elephant]</TD><TH ALIGN=CENTER>7X</TH>
<TH ALIGN=CENTER>46401353</TH>
  <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>45.214%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000299155.1/ 53]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eleEdw1 eleEdw1]</TH>
<TH ALIGN=RIGHT>8,768</TH>
<TH ALIGN=RIGHT>8,768</TH>
   <TD ALIGN=RIGHT>3,843,982,861</TD><TD ALIGN=RIGHT>3,315,871,847</TD>
   <TD ALIGN=RIGHT>3,843,982,861</TD><TD ALIGN=RIGHT>3,315,871,847</TD>
Line 431: Line 512:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Elephantulus_edwardii/EleEdw1.0/ Cape elephant shrew]</TD><TH ALIGN=CENTER>62X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Elephantulus_edwardii/EleEdw1.0/ Cape elephant shrew]</TD><TH ALIGN=CENTER>62X</TH>
<TH ALIGN=CENTER>15011382</TH>
<TH ALIGN=CENTER>15011382</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>26.839%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>N/A</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/10467 45]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triMan1 triMan1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/10467 54]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triMan1 triMan1]</TH>
<TH ALIGN=RIGHT>6,323</TH>
<TH ALIGN=RIGHT>6,323</TH>
   <TD ALIGN=RIGHT>3,103,808,406</TD><TD ALIGN=RIGHT>2,769,099,677</TD>
   <TD ALIGN=RIGHT>3,103,808,406</TD><TD ALIGN=RIGHT>2,769,099,677</TD>
Line 440: Line 521:
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AHIN01 Manatee]</TD><TH ALIGN=CENTER>150X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AHIN01 Manatee]</TD><TH ALIGN=CENTER>150X</TH>
<TH ALIGN=CENTER>14442683</TH>
<TH ALIGN=CENTER>14442683</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>45.346%</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000280705.1/ 46]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=jacJac1 jacJac1]</TH>
<TH ALIGN=RIGHT>10,896</TH>
  <TD ALIGN=RIGHT>2,835,242,767</TD><TD ALIGN=RIGHT>2,470,259,869</TD>
  <TD ALIGN=RIGHT>364,982,898</TD><TD ALIGN=RIGHT>%&nbsp;37.29</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Jaculus_jaculus/JacJac1.0/ Lesser Egyptian jerboa]</TD><TH ALIGN=CENTER>78X</TH>
<TH ALIGN=CENTER>22080993</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>27.899%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000276665.1/ 47]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chiLan1 chiLan1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000296735.1/ 55]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrAsi1 chrAsi1]</TH>
<TH ALIGN=RIGHT>2,838</TH>
<TH ALIGN=RIGHT>20,500</TH>
   <TD ALIGN=RIGHT>2,390,852,391</TD><TD ALIGN=RIGHT>2,284,276,400</TD>
   <TD ALIGN=RIGHT>4,210,110,458</TD><TD ALIGN=RIGHT>3,363,564,316</TD>
   <TD ALIGN=RIGHT>106,575,991</TD><TD ALIGN=RIGHT>%&nbsp;30.82</TD>
   <TD ALIGN=RIGHT>846,546,142</TD><TD ALIGN=RIGHT>%&nbsp;20.11</TD>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Chinchilla_lanigera/ChiLan1.0/ Chinchilla]</TD><TH ALIGN=CENTER>87X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Chrysochloris_asiatica/ChrAsi1.0/ Cape golden mole]</TD><TH ALIGN=CENTER>66X</TH>
<TH ALIGN=CENTER>21893125</TH>
<TH ALIGN=CENTER>13470186</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>40.808%</TD>
   <TH ALIGN=CENTER>RecipBest</TH><TD ALIGN=RIGHT>33.314%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000260355.1/ 48]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=conCri1 conCri1]</TH>
<TH ALIGN=RIGHT>2,038</TH>
  <TD ALIGN=RIGHT>1,769,657,897</TD><TD ALIGN=RIGHT>1,682,542,007</TD>
  <TD ALIGN=RIGHT>87,115,890</TD><TD ALIGN=RIGHT>%&nbsp;18.21</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Condylura_cristata/ConCri1.0/ Star-nosed mole]</TD><TH ALIGN=CENTER>113.1X</TH>
<TH ALIGN=CENTER>55520359</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000260255.1/ 49]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=octDeg1 octDeg1]</TH>
<TH ALIGN=RIGHT>7,134</TH>
  <TD ALIGN=RIGHT>2,995,882,938</TD><TD ALIGN=RIGHT>2,526,254,692</TD>
  <TD ALIGN=RIGHT>469,628,246</TD><TD ALIGN=RIGHT>%&nbsp;26.47</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Octodon_degus/OctDeg1.0/ Brush-tailed rat]</TD><TH ALIGN=CENTER>80X</TH>
<TH ALIGN=CENTER>12091372</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>35.827%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000292845.1/ 50]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri3 ochPri3]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000313985.1/ 56]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=echTel2 echTel2]</TH>
<TH ALIGN=RIGHT>10,420</TH>
  <TD ALIGN=RIGHT>2,229,835,716</TD><TD ALIGN=RIGHT>1,943,987,870</TD>
  <TD ALIGN=RIGHT>285,847,846</TD><TD ALIGN=RIGHT>%&nbsp;29.53</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Ochotona_princeps/OchPri3.0/ Pika]</TD><TH ALIGN=CENTER>103X</TH>
<TH ALIGN=CENTER>26863993</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000296755.1/ 51]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eriEur2 eriEur2]</TH>
<TH ALIGN=RIGHT>5,803</TH>
  <TD ALIGN=RIGHT>2,715,720,925</TD><TD ALIGN=RIGHT>2,333,073,535</TD>
  <TD ALIGN=RIGHT>382,647,390</TD><TD ALIGN=RIGHT>%&nbsp;45.60</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Erinaceus_europaeus/EriEur2.0/ Hedgehog]</TD><TH ALIGN=CENTER>79X</TH>
<TH ALIGN=CENTER>3264618</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>21.643%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000313985.1/ 52]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=echTel2 echTel2]</TH>
<TH ALIGN=RIGHT>8,402</TH>
<TH ALIGN=RIGHT>8,402</TH>
   <TD ALIGN=RIGHT>2,947,024,286</TD><TD ALIGN=RIGHT>2,605,196,361</TD>
   <TD ALIGN=RIGHT>2,947,024,286</TD><TD ALIGN=RIGHT>2,605,196,361</TD>
Line 503: Line 539:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Echinops_telfairi/EchTel2.0/ Tenrec]</TD><TH ALIGN=CENTER>78X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Echinops_telfairi/EchTel2.0/ Tenrec]</TD><TH ALIGN=CENTER>78X</TH>
<TH ALIGN=CENTER>45764842</TH>
<TH ALIGN=CENTER>45764842</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>27.550%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>29.310%</TD>
<TD ALIGN=RIGHT>3000</TD>
  <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000298275.1/ 57]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryAfe1 oryAfe1]</TH>
<TH ALIGN=RIGHT>22,509</TH>
  <TD ALIGN=RIGHT>4,444,080,527</TD><TD ALIGN=RIGHT>3,415,340,621</TD>
  <TD ALIGN=RIGHT>1,028,739,906</TD><TD ALIGN=RIGHT>%&nbsp;31.09</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Orycteropus_afer/OryAfe1.0/ Aardvark]</TD><TH ALIGN=CENTER>44X</TH>
<TH ALIGN=CENTER>7875832</TH>
  <TH ALIGN=CENTER>RecipBest</TH><TD ALIGN=RIGHT>40.563%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/assembly/327618/ 53]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm10 mm10]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/12594 58]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dasNov3 dasNov3]</TH>
<TH ALIGN=RIGHT>66</TH>
<TH ALIGN=RIGHT>46,559</TH>
   <TD ALIGN=RIGHT>2,730,871,774</TD><TD ALIGN=RIGHT>2,652,783,500</TD>
   <TD ALIGN=RIGHT>3,631,522,711</TD><TD ALIGN=RIGHT>3,299,882,028</TD>
   <TD ALIGN=RIGHT>78,088,274</TD><TD ALIGN=RIGHT>%&nbsp;45.18</TD>
   <TD ALIGN=RIGHT>331,640,683</TD><TD ALIGN=RIGHT>%&nbsp;49.28</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/bioproject/51977 Mouse]</TD><TH ALIGN=CENTER>20X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAGV03 Armadillo]</TD><TH ALIGN=CENTER>6X</TH>
<TH ALIGN=CENTER>130694993</TH>
<TH ALIGN=CENTER>1687935</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>31.629%</TD>
   <TH ALIGN=CENTER>SyntenicNet</TH><TD ALIGN=RIGHT>45.349%</TD>
<TD ALIGN=RIGHT>3000</TD>
<TD ALIGN=RIGHT>3000</TD>
   <TD ALIGN=CENTER>medium</TD></TR>
   <TD ALIGN=CENTER>medium</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000001895.4 54]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn6 rn6]</TH>
<TR><TH ALIGN=RIGHT>[http://www.broadinstitute.org/mammals/opossum 59]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom5 monDom5]</TH>
<TH ALIGN=RIGHT>953</TH>
  <TD ALIGN=RIGHT>2,870,182,909</TD><TD ALIGN=RIGHT>2,729,860,805</TD>
  <TD ALIGN=RIGHT>140,322,104</TD><TD ALIGN=RIGHT>%&nbsp;43.31</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AABR07 Rat]</TD><TH ALIGN=CENTER>10X</TH>
<TH ALIGN=CENTER>145729302</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000419365.1/ 55]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=criGri1 criGri1]</TH>
<TH ALIGN=RIGHT>52,711</TH>
  <TD ALIGN=RIGHT>2,360,146,428</TD><TD ALIGN=RIGHT>2,301,325,917</TD>
  <TD ALIGN=RIGHT>58,820,511</TD><TD ALIGN=RIGHT>%&nbsp;27.06</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Cricetulus_griseus/C_griseus_v1.0/ Chinese hamster]</TD><TH ALIGN=CENTER>130X</TH>
<TH ALIGN=CENTER>1558295</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000349665.1/ 56]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesAur1 mesAur1]</TH>
<TH ALIGN=RIGHT>21,484</TH>
  <TD ALIGN=RIGHT>2,504,925,039</TD><TD ALIGN=RIGHT>2,076,176,254</TD>
  <TD ALIGN=RIGHT>428,748,785</TD><TD ALIGN=RIGHT>%&nbsp;25.70</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Mesocricetus_auratus/MesAur1.0/ Golden hamster]</TD><TH ALIGN=CENTER>115X</TH>
<TH ALIGN=CENTER>12753307</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000317375.1/ 57]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micOch1 micOch1]</TH>
<TH ALIGN=RIGHT>6,335</TH>
  <TD ALIGN=RIGHT>2,287,340,943</TD><TD ALIGN=RIGHT>2,104,321,675</TD>
  <TD ALIGN=RIGHT>183,019,268</TD><TD ALIGN=RIGHT>%&nbsp;23.89</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Microtus_ochrogaster/MicOch1.0/ Prairie vole]</TD><TH ALIGN=CENTER>94X</TH>
<TH ALIGN=CENTER>61813736</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000181275.2/ 58]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sorAra2 sorAra2]</TH>
<TH ALIGN=RIGHT>12,845</TH>
  <TD ALIGN=RIGHT>2,423,158,183</TD><TD ALIGN=RIGHT>2,192,103,426</TD>
  <TD ALIGN=RIGHT>231,054,757</TD><TD ALIGN=RIGHT>%&nbsp;32.76</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Sorex_araneus/SorAra2.0/ Shrew]</TD><TH ALIGN=CENTER>120X</TH>
<TH ALIGN=CENTER>22794405</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/233 59]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macEug2 macEug2]</TH>
<TH ALIGN=RIGHT>277,711</TH>
  <TD ALIGN=RIGHT>3,075,184,024</TD><TD ALIGN=RIGHT>2,536,076,954</TD>
  <TD ALIGN=RIGHT>539,107,070</TD><TD ALIGN=RIGHT>%&nbsp;47.39</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ABQO00 Wallaby]</TD><TH ALIGN=CENTER>2X</TH>
<TH ALIGN=CENTER>36602</TH>
  <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.broadinstitute.org/mammals/opossum 60]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom5 monDom5]</TH>
<TH ALIGN=RIGHT>11</TH>
<TH ALIGN=RIGHT>11</TH>
   <TD ALIGN=RIGHT>3,605,631,728</TD><TD ALIGN=RIGHT>3,501,660,299</TD>
   <TD ALIGN=RIGHT>3,605,631,728</TD><TD ALIGN=RIGHT>3,501,660,299</TD>
Line 578: Line 569:
<TD ALIGN=RIGHT>5000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/3066 61]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sarHar1 sarHar1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/3066 60]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sarHar1 sarHar1]</TH>
<TH ALIGN=RIGHT>35,974</TH>
<TH ALIGN=RIGHT>35,974</TH>
   <TD ALIGN=RIGHT>3,174,693,010</TD><TD ALIGN=RIGHT>2,931,539,702</TD>
   <TD ALIGN=RIGHT>3,174,693,010</TD><TD ALIGN=RIGHT>2,931,539,702</TD>
Line 584: Line 575:
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AEFK00 Tasmanian devil]</TD><TH ALIGN=CENTER>85X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AEFK00 Tasmanian devil]</TD><TH ALIGN=CENTER>85X</TH>
<TH ALIGN=CENTER>1847106</TH>
<TH ALIGN=CENTER>1847106</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>12.754%</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000385615.1/ 62]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apaSpi1 apaSpi1]</TH>
<TH ALIGN=RIGHT>286,620</TH>
  <TD ALIGN=RIGHT>1,931,078,847</TD><TD ALIGN=RIGHT>1,877,982,184</TD>
  <TD ALIGN=RIGHT>53,096,663</TD><TD ALIGN=RIGHT>%&nbsp;29.87</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Apalone_spinifera/ASM38561v1/ Spiny softshell turtle]</TD><TH ALIGN=CENTER>33.4X</TH>
<TH ALIGN=CENTER>2306994</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000344595.1/ 63]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cheMyd1 cheMyd1]</TH>
<TH ALIGN=RIGHT>140,023</TH>
  <TD ALIGN=RIGHT>2,208,410,377</TD><TD ALIGN=RIGHT>2,110,381,997</TD>
  <TD ALIGN=RIGHT>98,028,380</TD><TD ALIGN=RIGHT>%&nbsp;29.65</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Chelonia_mydas/CheMyd_1.0/ Green seaturtle]</TD><TH ALIGN=CENTER>110X</TH>
<TH ALIGN=CENTER>3864108</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>6.296%</TD>
<TD ALIGN=RIGHT>5000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000241765.2 64]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrPic2 chrPic2]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/233 61]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macEug2 macEug2]</TH>
<TH ALIGN=RIGHT>78,595</TH>
<TH ALIGN=RIGHT>277,711</TH>
   <TD ALIGN=RIGHT>2,365,766,562</TD><TD ALIGN=RIGHT>2,173,204,089</TD>
   <TD ALIGN=RIGHT>3,075,184,024</TD><TD ALIGN=RIGHT>2,536,076,954</TD>
   <TD ALIGN=RIGHT>192,562,473</TD><TD ALIGN=RIGHT>%&nbsp;31.52</TD>
   <TD ALIGN=RIGHT>539,107,070</TD><TD ALIGN=RIGHT>%&nbsp;47.39</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AHGY02 Painted turtle]</TD><TH ALIGN=CENTER>15X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ABQO00 Wallaby]</TD><TH ALIGN=CENTER>2X</TH>
<TH ALIGN=CENTER>7072151</TH>
<TH ALIGN=CENTER>36602</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>6.708%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>6.378%</TD>
<TD ALIGN=RIGHT>5000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000230535.1/ 65]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelSin1 pelSin1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/110 62]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna1 ornAna1]</TH>
<TH ALIGN=RIGHT>19,904</TH>
  <TD ALIGN=RIGHT>2,202,483,752</TD><TD ALIGN=RIGHT>2,106,639,384</TD>
  <TD ALIGN=RIGHT>95,844,368</TD><TD ALIGN=RIGHT>%&nbsp;33.82</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Pelodiscus_sinensis/PelSin_1.0/ Chinese softshell turtle]</TD><TH ALIGN=CENTER>105X</TH>
<TH ALIGN=CENTER>3350749</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/110 66]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna1 ornAna1]</TH>
<TH ALIGN=RIGHT>201,523</TH>
<TH ALIGN=RIGHT>201,523</TH>
   <TD ALIGN=RIGHT>1,996,811,212</TD><TD ALIGN=RIGHT>1,842,235,522</TD>
   <TD ALIGN=RIGHT>1,996,811,212</TD><TD ALIGN=RIGHT>1,842,235,522</TD>
Line 629: Line 593:
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAPN00 Platypus]</TD><TH ALIGN=CENTER>6X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAPN00 Platypus]</TD><TH ALIGN=CENTER>6X</TH>
<TH ALIGN=CENTER>991605</TH>
<TH ALIGN=CENTER>991605</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>7.769%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000281125.1/ 67]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allMis1 allMis1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000337935.1/ 63]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colLiv1 colLiv1]</TH>
<TH ALIGN=RIGHT>14,645</TH>
  <TD ALIGN=RIGHT>2,174,259,888</TD><TD ALIGN=RIGHT>2,128,720,123</TD>
  <TD ALIGN=RIGHT>45,539,765</TD><TD ALIGN=RIGHT>%&nbsp;37.18</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Alligator_mississippiensis/allMis0.2/ American alligator]</TD><TH ALIGN=CENTER>68X</TH>
<TH ALIGN=CENTER>508966</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000337935.1/ 68]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colLiv1 colLiv1]</TH>
<TH ALIGN=RIGHT>14,923</TH>
<TH ALIGN=RIGHT>14,923</TH>
   <TD ALIGN=RIGHT>1,107,989,085</TD><TD ALIGN=RIGHT>1,086,925,875</TD>
   <TD ALIGN=RIGHT>1,107,989,085</TD><TD ALIGN=RIGHT>1,086,925,875</TD>
Line 647: Line 602:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Columba_livia/Cliv_1.0/ Rock pigeon]</TD><TH ALIGN=CENTER>60X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Columba_livia/Cliv_1.0/ Rock pigeon]</TD><TH ALIGN=CENTER>60X</TH>
<TH ALIGN=CENTER>3148738</TH>
<TH ALIGN=CENTER>3148738</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>4.712%</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/111 69]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal4 galGal4]</TH>
<TH ALIGN=RIGHT>15,932</TH>
  <TD ALIGN=RIGHT>1,046,932,099</TD><TD ALIGN=RIGHT>1,032,854,810</TD>
  <TD ALIGN=RIGHT>14,077,289</TD><TD ALIGN=RIGHT>%&nbsp;20.41</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AADN00 Chicken]</TD><TH ALIGN=CENTER>12X</TH>
<TH ALIGN=CENTER>90216835</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Anolis_carolinensis/ 70]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoCar2 anoCar2]</TH>
<TH ALIGN=RIGHT>6,457</TH>
  <TD ALIGN=RIGHT>1,799,143,587</TD><TD ALIGN=RIGHT>1,701,353,767</TD>
  <TD ALIGN=RIGHT>97,789,820</TD><TD ALIGN=RIGHT>%&nbsp;41.98</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAWZ00 Lizard]</TD><TH ALIGN=CENTER>7.1X</TH>
<TH ALIGN=CENTER>150641573</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>3.593%</TD>
<TD ALIGN=RIGHT>5000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000355885.1/ 71]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anaPla1 anaPla1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000337975.1/ 64]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falChe1 falChe1]</TH>
<TH ALIGN=RIGHT>78,488</TH>
  <TD ALIGN=RIGHT>1,105,052,351</TD><TD ALIGN=RIGHT>1,069,972,754</TD>
  <TD ALIGN=RIGHT>35,079,597</TD><TD ALIGN=RIGHT>%&nbsp;20.21</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Anas_platyrhynchos/BGI_duck_1.0/ Mallard duck]</TD><TH ALIGN=CENTER>60X</TH>
<TH ALIGN=CENTER>1233631</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Meleagris_gallopavo/Turkey_2.01/ 72]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melGal1 melGal1]</TH>
<TH ALIGN=RIGHT>5,891</TH>
  <TD ALIGN=RIGHT>1,061,817,101</TD><TD ALIGN=RIGHT>935,922,386</TD>
  <TD ALIGN=RIGHT>125,894,715</TD><TD ALIGN=RIGHT>%&nbsp;6.60</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ADDD00 Turkey]</TD><TH ALIGN=CENTER>5X</TH>
<TH ALIGN=CENTER>74864452</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000337975.1/ 73]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falChe1 falChe1]</TH>
<TH ALIGN=RIGHT>5,863</TH>
<TH ALIGN=RIGHT>5,863</TH>
   <TD ALIGN=RIGHT>1,174,811,715</TD><TD ALIGN=RIGHT>1,150,993,769</TD>
   <TD ALIGN=RIGHT>1,174,811,715</TD><TD ALIGN=RIGHT>1,150,993,769</TD>
Line 692: Line 611:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Falco_cherrug/F_cherrug_v1.0/ Saker falcon]</TD><TH ALIGN=CENTER>147X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Falco_cherrug/F_cherrug_v1.0/ Saker falcon]</TD><TH ALIGN=CENTER>147X</TH>
<TH ALIGN=CENTER>4154532</TH>
<TH ALIGN=CENTER>4154532</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>4.828%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>N/A</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000337955.1/ 74]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falPer1 falPer1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000337955.1/ 65]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falPer1 falPer1]</TH>
<TH ALIGN=RIGHT>7,021</TH>
<TH ALIGN=RIGHT>7,021</TH>
   <TD ALIGN=RIGHT>1,171,973,431</TD><TD ALIGN=RIGHT>1,153,404,348</TD>
   <TD ALIGN=RIGHT>1,171,973,431</TD><TD ALIGN=RIGHT>1,153,404,348</TD>
Line 701: Line 620:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Falco_peregrinus/F_peregrinus_v1.0/ Peregrine falcon]</TD><TH ALIGN=CENTER>137.6X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Falco_peregrinus/F_peregrinus_v1.0/ Peregrine falcon]</TD><TH ALIGN=CENTER>137.6X</TH>
<TH ALIGN=CENTER>3935757</TH>
<TH ALIGN=CENTER>3935757</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>4.926%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000332375.1/ 75]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=amaVit1 amaVit1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000247815.2/ 66]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ficAlb2 ficAlb2]</TH>
<TH ALIGN=RIGHT>182,974</TH>
  <TD ALIGN=RIGHT>1,175,404,042</TD><TD ALIGN=RIGHT>1,128,255,752</TD>
  <TD ALIGN=RIGHT>47,148,290</TD><TD ALIGN=RIGHT>%&nbsp;18.36</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Amazona_vittata/AV1/ Parrot]</TD><TH ALIGN=CENTER>24X</TH>
<TH ALIGN=CENTER>19239</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000400695.1/ 76]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=araMac1 araMac1]</TH>
<TH ALIGN=RIGHT>192,790</TH>
  <TD ALIGN=RIGHT>1,204,700,227</TD><TD ALIGN=RIGHT>997,522,769</TD>
  <TD ALIGN=RIGHT>207,177,458</TD><TD ALIGN=RIGHT>%&nbsp;16.49</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Ara_macao/SMACv1.1/ Scarlet Macaw]</TD><TH ALIGN=CENTER>26X</TH>
<TH ALIGN=CENTER>15974</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000331425.1/ 77]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pseHum1 pseHum1]</TH>
<TH ALIGN=RIGHT>5,406</TH>
  <TD ALIGN=RIGHT>1,042,997,632</TD><TD ALIGN=RIGHT>1,030,030,436</TD>
  <TD ALIGN=RIGHT>12,967,196</TD><TD ALIGN=RIGHT>%&nbsp;20.21</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Pseudopodoces_humilis/PseHum1.0/ Tibetan ground jay]</TD><TH ALIGN=CENTER>96.25X</TH>
<TH ALIGN=CENTER>16337386</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/10765 78]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melUnd1 melUnd1]</TH>
<TH ALIGN=RIGHT>25,212</TH>
  <TD ALIGN=RIGHT>1,117,373,619</TD><TD ALIGN=RIGHT>1,086,614,815</TD>
  <TD ALIGN=RIGHT>30,758,804</TD><TD ALIGN=RIGHT>%&nbsp;19.62</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AGAI01 Budgerigar]</TD><TH ALIGN=CENTER>7X</TH>
<TH ALIGN=CENTER>10614383</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000247815.2/ 79]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ficAlb2 ficAlb2]</TH>
<TH ALIGN=RIGHT>21,428</TH>
<TH ALIGN=RIGHT>21,428</TH>
   <TD ALIGN=RIGHT>1,118,343,587</TD><TD ALIGN=RIGHT>1,102,323,882</TD>
   <TD ALIGN=RIGHT>1,118,343,587</TD><TD ALIGN=RIGHT>1,102,323,882</TD>
Line 746: Line 629:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Ficedula_albicollis/FicAlb1.5/ Collared flycatcher]</TD><TH ALIGN=CENTER>60X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Ficedula_albicollis/FicAlb1.5/ Collared flycatcher]</TD><TH ALIGN=CENTER>60X</TH>
<TH ALIGN=CENTER>64724594</TH>
<TH ALIGN=CENTER>64724594</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>4.822%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>N/A</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000385455.1/ 80]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zonAlb1 zonAlb1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000385455.1/ 67]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zonAlb1 zonAlb1]</TH>
<TH ALIGN=RIGHT>6,018</TH>
<TH ALIGN=RIGHT>6,018</TH>
   <TD ALIGN=RIGHT>1,052,600,561</TD><TD ALIGN=RIGHT>1,006,293,510</TD>
   <TD ALIGN=RIGHT>1,052,600,561</TD><TD ALIGN=RIGHT>1,006,293,510</TD>
Line 755: Line 638:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Zonotrichia_albicollis/ASM38545v1/ White-throated sparrow]</TD><TH ALIGN=CENTER>63X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Zonotrichia_albicollis/ASM38545v1/ White-throated sparrow]</TD><TH ALIGN=CENTER>63X</TH>
<TH ALIGN=CENTER>4866725</TH>
<TH ALIGN=CENTER>4866725</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>4.494%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>N/A</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/156703 81]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=geoFor1 geoFor1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/156703 68]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=geoFor1 geoFor1]</TH>
<TH ALIGN=RIGHT>27,239</TH>
<TH ALIGN=RIGHT>27,239</TH>
   <TD ALIGN=RIGHT>1,065,292,181</TD><TD ALIGN=RIGHT>1,041,286,029</TD>
   <TD ALIGN=RIGHT>1,065,292,181</TD><TD ALIGN=RIGHT>1,041,286,029</TD>
Line 764: Line 647:
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AKZB01 Medium ground finch]</TD><TH ALIGN=CENTER>115X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AKZB01 Medium ground finch]</TD><TH ALIGN=CENTER>115X</TH>
<TH ALIGN=CENTER>5255844</TH>
<TH ALIGN=CENTER>5255844</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>4.445%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>N/A</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000151805.2/ 82]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut2 taeGut2]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000151805.2/ 69]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut2 taeGut2]</TH>
<TH ALIGN=RIGHT>37,096</TH>
<TH ALIGN=RIGHT>37,096</TH>
   <TD ALIGN=RIGHT>1,232,135,591</TD><TD ALIGN=RIGHT>1,222,864,691</TD>
   <TD ALIGN=RIGHT>1,232,135,591</TD><TD ALIGN=RIGHT>1,222,864,691</TD>
Line 773: Line 656:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Taeniopygia_guttata/Taeniopygia_guttata-3.2.4/ Zebra finch]</TD><TH ALIGN=CENTER>5.5X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Taeniopygia_guttata/Taeniopygia_guttata-3.2.4/ Zebra finch]</TD><TH ALIGN=CENTER>5.5X</TH>
<TH ALIGN=CENTER>62374962</TH>
<TH ALIGN=CENTER>62374962</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>5.893%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>N/A</TD></TR>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000242695.1/ 83]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepOcu1 lepOcu1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000331425.1/ 70]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pseHum1 pseHum1]</TH>
<TH ALIGN=RIGHT>1,925</TH>
<TH ALIGN=RIGHT>5,406</TH>
   <TD ALIGN=RIGHT>945,874,548</TD><TD ALIGN=RIGHT>869,414,359</TD>
  <TD ALIGN=RIGHT>1,042,997,632</TD><TD ALIGN=RIGHT>1,030,030,436</TD>
   <TD ALIGN=RIGHT>76,460,189</TD><TD ALIGN=RIGHT>%&nbsp;24.85</TD>
  <TD ALIGN=RIGHT>12,967,196</TD><TD ALIGN=RIGHT>%&nbsp;20.21</TD>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Lepisosteus_oculatus/LepOcu1/ Spotted gar]</TD><TH ALIGN=CENTER>677.5X</TH>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Pseudopodoces_humilis/PseHum1.0/ Tibetan ground jay]</TD><TH ALIGN=CENTER>96.25X</TH>
<TH ALIGN=CENTER>50348508</TH>
<TH ALIGN=CENTER>16337386</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>5.146%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>N/A</TD></TR>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000004195.2/ 84]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 xenTro7]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/10765 71]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melUnd1 melUnd1]</TH>
<TH ALIGN=RIGHT>25,212</TH>
  <TD ALIGN=RIGHT>1,117,373,619</TD><TD ALIGN=RIGHT>1,086,614,815</TD>
  <TD ALIGN=RIGHT>30,758,804</TD><TD ALIGN=RIGHT>%&nbsp;19.62</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AGAI01 Budgerigar]</TD><TH ALIGN=CENTER>7X</TH>
<TH ALIGN=CENTER>10614383</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>4.474%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000332375.1/ 72]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=amaVit1 amaVit1]</TH>
<TH ALIGN=RIGHT>182,974</TH>
  <TD ALIGN=RIGHT>1,175,404,042</TD><TD ALIGN=RIGHT>1,128,255,752</TD>
  <TD ALIGN=RIGHT>47,148,290</TD><TD ALIGN=RIGHT>%&nbsp;18.36</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Amazona_vittata/AV1/ Parrot]</TD><TH ALIGN=CENTER>24X</TH>
<TH ALIGN=CENTER>19239</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>4.186%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000400695.1/ 73]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=araMac1 araMac1]</TH>
<TH ALIGN=RIGHT>192,790</TH>
  <TD ALIGN=RIGHT>1,204,700,227</TD><TD ALIGN=RIGHT>997,522,769</TD>
  <TD ALIGN=RIGHT>207,177,458</TD><TD ALIGN=RIGHT>%&nbsp;16.49</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Ara_macao/SMACv1.1/ Scarlet Macaw]</TD><TH ALIGN=CENTER>26X</TH>
<TH ALIGN=CENTER>15974</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>3.787%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000355885.1/ 74]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anaPla1 anaPla1]</TH>
<TH ALIGN=RIGHT>78,488</TH>
  <TD ALIGN=RIGHT>1,105,052,351</TD><TD ALIGN=RIGHT>1,069,972,754</TD>
  <TD ALIGN=RIGHT>35,079,597</TD><TD ALIGN=RIGHT>%&nbsp;20.21</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Anas_platyrhynchos/BGI_duck_1.0/ Mallard duck]</TD><TH ALIGN=CENTER>60X</TH>
<TH ALIGN=CENTER>1233631</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>4.268%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/111 75]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal4 galGal4]</TH>
<TH ALIGN=RIGHT>15,932</TH>
  <TD ALIGN=RIGHT>1,046,932,099</TD><TD ALIGN=RIGHT>1,032,854,810</TD>
  <TD ALIGN=RIGHT>14,077,289</TD><TD ALIGN=RIGHT>%&nbsp;20.41</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AADN00 Chicken]</TD><TH ALIGN=CENTER>12X</TH>
<TH ALIGN=CENTER>90216835</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>4.696%</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Meleagris_gallopavo/Turkey_2.01/ 76]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melGal1 melGal1]</TH>
<TH ALIGN=RIGHT>5,891</TH>
  <TD ALIGN=RIGHT>1,061,817,101</TD><TD ALIGN=RIGHT>935,922,386</TD>
  <TD ALIGN=RIGHT>125,894,715</TD><TD ALIGN=RIGHT>%&nbsp;6.60</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ADDD00 Turkey]</TD><TH ALIGN=CENTER>5X</TH>
<TH ALIGN=CENTER>74864452</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>4.328%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000281125.1/ 77]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allMis1 allMis1]</TH>
<TH ALIGN=RIGHT>14,645</TH>
  <TD ALIGN=RIGHT>2,174,259,888</TD><TD ALIGN=RIGHT>2,128,720,123</TD>
  <TD ALIGN=RIGHT>45,539,765</TD><TD ALIGN=RIGHT>%&nbsp;37.18</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Alligator_mississippiensis/allMis0.2/ American alligator]</TD><TH ALIGN=CENTER>68X</TH>
<TH ALIGN=CENTER>508966</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>7.561%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000344595.1/ 78]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cheMyd1 cheMyd1]</TH>
<TH ALIGN=RIGHT>140,023</TH>
  <TD ALIGN=RIGHT>2,208,410,377</TD><TD ALIGN=RIGHT>2,110,381,997</TD>
  <TD ALIGN=RIGHT>98,028,380</TD><TD ALIGN=RIGHT>%&nbsp;29.65</TD>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Chelonia_mydas/CheMyd_1.0/ Green seaturtle]</TD><TH ALIGN=CENTER>110X</TH>
<TH ALIGN=CENTER>3864108</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>6.296%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000241765.2 79]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrPic2 chrPic2]</TH>
<TH ALIGN=RIGHT>78,595</TH>
  <TD ALIGN=RIGHT>2,365,766,562</TD><TD ALIGN=RIGHT>2,173,204,089</TD>
  <TD ALIGN=RIGHT>192,562,473</TD><TD ALIGN=RIGHT>%&nbsp;31.52</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AHGY02 Painted turtle]</TD><TH ALIGN=CENTER>15X</TH>
<TH ALIGN=CENTER>7072151</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>6.708%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000230535.1/ 80]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelSin1 pelSin1]</TH>
<TH ALIGN=RIGHT>19,904</TH>
  <TD ALIGN=RIGHT>2,202,483,752</TD><TD ALIGN=RIGHT>2,106,639,384</TD>
  <TD ALIGN=RIGHT>95,844,368</TD><TD ALIGN=RIGHT>%&nbsp;33.82</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Pelodiscus_sinensis/PelSin_1.0/ Chinese softshell turtle]</TD><TH ALIGN=CENTER>105X</TH>
<TH ALIGN=CENTER>3350749</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>5.716%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000385615.1/ 81]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apaSpi1 apaSpi1]</TH>
<TH ALIGN=RIGHT>286,620</TH>
  <TD ALIGN=RIGHT>1,931,078,847</TD><TD ALIGN=RIGHT>1,877,982,184</TD>
  <TD ALIGN=RIGHT>53,096,663</TD><TD ALIGN=RIGHT>%&nbsp;29.87</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Apalone_spinifera/ASM38561v1/ Spiny softshell turtle]</TD><TH ALIGN=CENTER>33.4X</TH>
<TH ALIGN=CENTER>2306994</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>4.611%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Anolis_carolinensis/ 82]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoCar2 anoCar2]</TH>
<TH ALIGN=RIGHT>6,457</TH>
  <TD ALIGN=RIGHT>1,799,143,587</TD><TD ALIGN=RIGHT>1,701,353,767</TD>
  <TD ALIGN=RIGHT>97,789,820</TD><TD ALIGN=RIGHT>%&nbsp;41.98</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAWZ00 Lizard]</TD><TH ALIGN=CENTER>7.1X</TH>
<TH ALIGN=CENTER>150641573</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>3.593%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000004195.2/ 83]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 xenTro7]</TH>
<TH ALIGN=RIGHT>7,728</TH>
<TH ALIGN=RIGHT>7,728</TH>
   <TD ALIGN=RIGHT>1,437,530,879</TD><TD ALIGN=RIGHT>1,365,936,747</TD>
   <TD ALIGN=RIGHT>1,437,530,879</TD><TD ALIGN=RIGHT>1,365,936,747</TD>
Line 791: Line 782:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Xenopus_tropicalis/Xtropicalis_v7/ X. tropicalis]</TD><TH ALIGN=CENTER>7.44X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Xenopus_tropicalis/Xtropicalis_v7/ X. tropicalis]</TD><TH ALIGN=CENTER>7.44X</TH>
<TH ALIGN=CENTER>124127367</TH>
<TH ALIGN=CENTER>124127367</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>3.811%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>N/A</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/56111 85]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=latCha1 latCha1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/56111 84]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=latCha1 latCha1]</TH>
<TH ALIGN=RIGHT>22,819</TH>
<TH ALIGN=RIGHT>22,819</TH>
   <TD ALIGN=RIGHT>2,860,591,921</TD><TD ALIGN=RIGHT>2,183,592,768</TD>
   <TD ALIGN=RIGHT>2,860,591,921</TD><TD ALIGN=RIGHT>2,183,592,768</TD>
Line 800: Line 791:
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AFYH00 Coelacanth]</TD><TH ALIGN=CENTER>77.5X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AFYH00 Coelacanth]</TD><TH ALIGN=CENTER>77.5X</TH>
<TH ALIGN=CENTER>924513</TH>
<TH ALIGN=CENTER>924513</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>2.873%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>N/A</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/2661 86]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gadMor1 gadMor1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.genoscope.cns.fr/spip/Tetraodon-nigroviridis-a-fish-with.html 85]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tetNig2 tetNig2]</TH>
<TH ALIGN=RIGHT>427,428</TH>
<TH ALIGN=RIGHT>27</TH>
   <TD ALIGN=RIGHT>824,327,835</TD><TD ALIGN=RIGHT>608,038,555</TD>
  <TD ALIGN=RIGHT>358,618,246</TD><TD ALIGN=RIGHT>302,314,788</TD>
   <TD ALIGN=RIGHT>216,289,280</TD><TD ALIGN=RIGHT>%&nbsp;31.25</TD>
  <TD ALIGN=RIGHT>56,303,458</TD><TD ALIGN=RIGHT>%&nbsp;20.27</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=CAEA00 Atlantic cod]</TD><TH ALIGN=CENTER>40X</TH>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=CAAE01 Tetraodon]</TD><TH ALIGN=CENTER>7.9X</TH>
<TH ALIGN=CENTER>393166</TH>
<TH ALIGN=CENTER>13390619</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>1.743%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>N/A</TD></TR>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[ftp://ftp.broadinstitute.org/pub/assemblies/fish/stickleback/gasAcu1/ 87]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gasAcu1 gasAcu1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.fugu-sg.org/ 86]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr3 fr3]</TH>
<TH ALIGN=RIGHT>23</TH>
<TH ALIGN=RIGHT>6,835</TH>
   <TD ALIGN=RIGHT>463,354,448</TD><TD ALIGN=RIGHT>446,627,861</TD>
   <TD ALIGN=RIGHT>391,484,715</TD><TD ALIGN=RIGHT>350,961,831</TD>
   <TD ALIGN=RIGHT>16,726,587</TD><TD ALIGN=RIGHT>%&nbsp;2.58</TD>
   <TD ALIGN=RIGHT>40,522,884</TD><TD ALIGN=RIGHT>%&nbsp;19.01</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AANH01 Stickleback]</TD><TH ALIGN=CENTER>6X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=CAAB02 Fugu]</TD><TH ALIGN=CENTER>8.5X</TH>
<TH ALIGN=CENTER>20083130</TH>
<TH ALIGN=CENTER>11516971</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>1.784%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>N/A</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000400755.1/ 87]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=takFla1 takFla1]</TH>
<TH ALIGN=RIGHT>34,223</TH>
   <TD ALIGN=RIGHT>377,992,166</TD><TD ALIGN=RIGHT>314,409,984</TD>
   <TD ALIGN=RIGHT>63,582,182</TD><TD ALIGN=RIGHT>%&nbsp;17.77</TD>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Takifugu_flavidus/version_1_of_Takifugu_flavidus_genome/ Yellowbelly pufferfish]</TD><TH ALIGN=CENTER>131X</TH>
<TH ALIGN=CENTER>315240</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>1.548%</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/59571 88]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oreNil2 oreNil2]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/59571 88]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oreNil2 oreNil2]</TH>
<TH ALIGN=RIGHT>5,678</TH>
<TH ALIGN=RIGHT>5,678</TH>
Line 827: Line 827:
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AERX01 Nile tilapia]</TD><TH ALIGN=CENTER>269X</TH>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AERX01 Nile tilapia]</TD><TH ALIGN=CENTER>269X</TH>
<TH ALIGN=CENTER>27159252</TH>
<TH ALIGN=CENTER>27159252</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>1.868%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.genoscope.cns.fr/spip/Tetraodon-nigroviridis-a-fish-with.html 89]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tetNig2 tetNig2]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000239395.1/ 89]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=neoBri1 neoBri1]</TH>
<TH ALIGN=RIGHT>27</TH>
  <TD ALIGN=RIGHT>358,618,246</TD><TD ALIGN=RIGHT>302,314,788</TD>
  <TD ALIGN=RIGHT>56,303,458</TD><TD ALIGN=RIGHT>%&nbsp;20.27</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=CAAE01 Tetraodon]</TD><TH ALIGN=CENTER>7.9X</TH>
<TH ALIGN=CENTER>13390619</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000239395.1/ 90]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=neoBri1 neoBri1]</TH>
<TH ALIGN=RIGHT>9,083</TH>
<TH ALIGN=RIGHT>9,083</TH>
   <TD ALIGN=RIGHT>847,883,811</TD><TD ALIGN=RIGHT>685,897,279</TD>
   <TD ALIGN=RIGHT>847,883,811</TD><TD ALIGN=RIGHT>685,897,279</TD>
Line 845: Line 836:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Neolamprologus_brichardi/NeoBri1.0/ Princess of Burundi]</TD><TH ALIGN=CENTER>171X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Neolamprologus_brichardi/NeoBri1.0/ Princess of Burundi]</TD><TH ALIGN=CENTER>171X</TH>
<TH ALIGN=CENTER>4430025</TH>
<TH ALIGN=CENTER>4430025</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>1.767%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000400755.1/ 91]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=takFla1 takFla1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000239415.1/ 90]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hapBur1 hapBur1]</TH>
<TH ALIGN=RIGHT>34,223</TH>
  <TD ALIGN=RIGHT>377,992,166</TD><TD ALIGN=RIGHT>314,409,984</TD>
  <TD ALIGN=RIGHT>63,582,182</TD><TD ALIGN=RIGHT>%&nbsp;17.77</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Takifugu_flavidus/version_1_of_Takifugu_flavidus_genome/ Yellowbelly pufferfish]</TD><TH ALIGN=CENTER>131X</TH>
<TH ALIGN=CENTER>315240</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000239415.1/ 92]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hapBur1 hapBur1]</TH>
<TH ALIGN=RIGHT>7,994</TH>
<TH ALIGN=RIGHT>7,994</TH>
   <TD ALIGN=RIGHT>831,398,301</TD><TD ALIGN=RIGHT>698,936,397</TD>
   <TD ALIGN=RIGHT>831,398,301</TD><TD ALIGN=RIGHT>698,936,397</TD>
Line 863: Line 845:
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Haplochromis_burtoni/AstBur1.0/ Burton's mouthbreeder]</TD><TH ALIGN=CENTER>131X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Haplochromis_burtoni/AstBur1.0/ Burton's mouthbreeder]</TD><TH ALIGN=CENTER>131X</TH>
<TH ALIGN=CENTER>1194190</TH>
<TH ALIGN=CENTER>1194190</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>1.783%</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.fugu-sg.org/ 93]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr3 fr3]</TH>
<TH ALIGN=RIGHT>6,835</TH>
  <TD ALIGN=RIGHT>391,484,715</TD><TD ALIGN=RIGHT>350,961,831</TD>
  <TD ALIGN=RIGHT>40,522,884</TD><TD ALIGN=RIGHT>%&nbsp;19.01</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=CAAB02 Fugu]</TD><TH ALIGN=CENTER>8.5X</TH>
<TH ALIGN=CENTER>11516971</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000372685.1/ 94]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=astMex1 astMex1]</TH>
<TH ALIGN=RIGHT>10,736</TH>
  <TD ALIGN=RIGHT>1,191,259,254</TD><TD ALIGN=RIGHT>964,251,514</TD>
  <TD ALIGN=RIGHT>227,007,740</TD><TD ALIGN=RIGHT>%&nbsp;39.11</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Astyanax_mexicanus/Astyanax_mexicanus-1.0.2/ Mexican tetra (cavefish)]</TD><TH ALIGN=CENTER>70X</TH>
<TH ALIGN=CENTER>1775308</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>1000</TD>
  <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/12880 95]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=petMar2 petMar2]</TH>
<TH ALIGN=RIGHT>25,006</TH>
  <TD ALIGN=RIGHT>885,550,958</TD><TD ALIGN=RIGHT>647,368,134</TD>
  <TD ALIGN=RIGHT>238,182,824</TD><TD ALIGN=RIGHT>%&nbsp;42.47</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AEFG01 Lamprey]</TD><TH ALIGN=CENTER>5.0X</TH>
<TH ALIGN=CENTER>184619</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>1.265%</TD>
<TD ALIGN=RIGHT>5000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCF_000002035.5 96]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer10 danRer10]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000238955.2/ 91]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mayZeb1 mayZeb1]</TH>
<TH ALIGN=RIGHT>1,061</TH>
  <TD ALIGN=RIGHT>1,371,719,383</TD><TD ALIGN=RIGHT>1,369,631,918</TD>
  <TD ALIGN=RIGHT>2,087,465</TD><TD ALIGN=RIGHT>%&nbsp;52.32</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=CABZ01 Zebrafish]</TD><TH ALIGN=CENTER>30X</TH>
<TH ALIGN=CENTER>53345113</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>3.357%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000238955.2/ 97]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mayZeb1 mayZeb1]</TH>
<TH ALIGN=RIGHT>3,725</TH>
<TH ALIGN=RIGHT>3,725</TH>
   <TD ALIGN=RIGHT>849,595,388</TD><TD ALIGN=RIGHT>713,527,863</TD>
   <TD ALIGN=RIGHT>849,595,388</TD><TD ALIGN=RIGHT>713,527,863</TD>
Line 911: Line 857:
<TD ALIGN=RIGHT>5000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000239375.1/ 98]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=punNye1 punNye1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000239375.1/ 92]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=punNye1 punNye1]</TH>
<TH ALIGN=RIGHT>7,233</TH>
<TH ALIGN=RIGHT>7,233</TH>
   <TD ALIGN=RIGHT>830,129,318</TD><TD ALIGN=RIGHT>698,757,151</TD>
   <TD ALIGN=RIGHT>830,129,318</TD><TD ALIGN=RIGHT>698,757,151</TD>
Line 920: Line 866:
<TD ALIGN=RIGHT>5000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://dolphin.lab.nig.ac.jp/medaka/index.php 99]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryLat2 oryLat2]</TH>
<TR><TH ALIGN=RIGHT>[http://dolphin.lab.nig.ac.jp/medaka/index.php 93]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryLat2 oryLat2]</TH>
<TH ALIGN=RIGHT>7,189</TH>
<TH ALIGN=RIGHT>7,189</TH>
   <TD ALIGN=RIGHT>869,000,216</TD><TD ALIGN=RIGHT>700,386,597</TD>
   <TD ALIGN=RIGHT>869,000,216</TD><TD ALIGN=RIGHT>700,386,597</TD>
Line 929: Line 875:
<TD ALIGN=RIGHT>5000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000241075.1/ 100]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xipMac1 xipMac1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000241075.1/ 94]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xipMac1 xipMac1]</TH>
<TH ALIGN=RIGHT>20,632</TH>
<TH ALIGN=RIGHT>20,632</TH>
   <TD ALIGN=RIGHT>729,664,433</TD><TD ALIGN=RIGHT>652,811,251</TD>
   <TD ALIGN=RIGHT>729,664,433</TD><TD ALIGN=RIGHT>652,811,251</TD>
Line 936: Line 882:
<TH ALIGN=CENTER>1303070</TH>
<TH ALIGN=CENTER>1303070</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>1.898%</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>1.898%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[ftp://ftp.broadinstitute.org/pub/assemblies/fish/stickleback/gasAcu1/ 95]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gasAcu1 gasAcu1]</TH>
<TH ALIGN=RIGHT>23</TH>
  <TD ALIGN=RIGHT>463,354,448</TD><TD ALIGN=RIGHT>446,627,861</TD>
  <TD ALIGN=RIGHT>16,726,587</TD><TD ALIGN=RIGHT>%&nbsp;2.58</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AANH01 Stickleback]</TD><TH ALIGN=CENTER>6X</TH>
<TH ALIGN=CENTER>20083130</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>2.080%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/2661 96]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gadMor1 gadMor1]</TH>
<TH ALIGN=RIGHT>427,428</TH>
  <TD ALIGN=RIGHT>824,327,835</TD><TD ALIGN=RIGHT>608,038,555</TD>
  <TD ALIGN=RIGHT>216,289,280</TD><TD ALIGN=RIGHT>%&nbsp;31.25</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=CAEA00 Atlantic cod]</TD><TH ALIGN=CENTER>40X</TH>
<TH ALIGN=CENTER>393166</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>1.660%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCF_000002035.5 97]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer10 danRer10]</TH>
<TH ALIGN=RIGHT>1,061</TH>
  <TD ALIGN=RIGHT>1,371,719,383</TD><TD ALIGN=RIGHT>1,369,631,918</TD>
  <TD ALIGN=RIGHT>2,087,465</TD><TD ALIGN=RIGHT>%&nbsp;52.32</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=CABZ01 Zebrafish]</TD><TH ALIGN=CENTER>30X</TH>
<TH ALIGN=CENTER>53345113</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>3.357%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000372685.1/ 98]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=astMex1 astMex1]</TH>
<TH ALIGN=RIGHT>10,736</TH>
  <TD ALIGN=RIGHT>1,191,259,254</TD><TD ALIGN=RIGHT>964,251,514</TD>
  <TD ALIGN=RIGHT>227,007,740</TD><TD ALIGN=RIGHT>%&nbsp;39.11</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Astyanax_mexicanus/Astyanax_mexicanus-1.0.2/ Mexican tetra (cavefish)]</TD><TH ALIGN=CENTER>70X</TH>
<TH ALIGN=CENTER>1775308</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>2.225%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000242695.1/ 99]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepOcu1 lepOcu1]</TH>
<TH ALIGN=RIGHT>1,925</TH>
  <TD ALIGN=RIGHT>945,874,548</TD><TD ALIGN=RIGHT>869,414,359</TD>
  <TD ALIGN=RIGHT>76,460,189</TD><TD ALIGN=RIGHT>%&nbsp;24.85</TD>
  <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_other/Lepisosteus_oculatus/LepOcu1/ Spotted gar]</TD><TH ALIGN=CENTER>677.5X</TH>
<TH ALIGN=CENTER>50348508</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>2.511%</TD>
<TD ALIGN=RIGHT>5000</TD>
  <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/bioproject/12880 100]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=petMar2 petMar2]</TH>
<TH ALIGN=RIGHT>25,006</TH>
  <TD ALIGN=RIGHT>885,550,958</TD><TD ALIGN=RIGHT>647,368,134</TD>
  <TD ALIGN=RIGHT>238,182,824</TD><TD ALIGN=RIGHT>%&nbsp;42.47</TD>
  <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AEFG01 Lamprey]</TD><TH ALIGN=CENTER>5.0X</TH>
<TH ALIGN=CENTER>184619</TH>
  <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>1.265%</TD>
<TD ALIGN=RIGHT>5000</TD>
<TD ALIGN=RIGHT>5000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
</TABLE>
</TABLE>

Latest revision as of 19:56, 14 May 2015

see also

statistics collected from UCSC 2bit files

  • The external link in the first column goes to the FTP location where the genome sequence was obtained
  • The external links from the UCSC database name go to the UCSC genome-test browser for that genome
  • N bases == unknown bases in the assembly marked by "N"
  • non-N bases == called bases in the assembly
  • total size == all bases in assembly, N and non-N
  • The % masked is masking from Repeat Masker or Window Masker plus TRF/Simple Repeats, whichever is greater, usually WindowMasker for these genomes
  • The common name external links go to information pages for this genome
  • The coverage numbers are taken directly from information README files from the sequencing center
  • The N50 size is calculated directly from the UCSC chrom.sizes file which is the size of the chromosomes as seen in the UCSC genome browser

do not edit, automatically generated table

order
count/
ftp src
ucsc
db name/
genome-test
chrom
count
total
size
non-N
bases
N base
count
% masked common name/
src info
coverage N50
chrom.sizes
alignment type % of hg38
matched
(chainLink table)
chain
minScore
chain
linearGap
01hg38 455 3,209,286,1053,049,315,783 159,970,322% 52.10 Human20X 145138636 N/AN/A 3000 medium
02panTro4 24,129 3,309,577,9222,902,338,967 407,238,955% 51.29 Chimp6X 143986469 SyntenicNet93.112% 5000 medium
03gorGor3 46,823 3,029,553,6462,822,760,080 206,793,566% 48.80 Gorilla2.1X 145327772 RecipBest88.005% 3000 medium
04ponAbe2 55 3,446,771,3963,093,543,172 353,228,224% 50.89 Orangutan6X 135191526 SyntenicNet89.187% 5000 medium
05nomLeu3 17,492 2,962,077,4492,756,609,047 205,468,402% 51.14 Gibbon5.6X 117381234 SyntenicNet86.379% 3000 medium
06rheMac3 34,103 2,969,988,1802,639,145,830 330,842,350% 48.54 Rhesus50X 150158102 SyntenicNet80.828% 5000 medium
07macFas5 7,601 2,946,843,7372,803,866,385 142,977,352% 50.11 Crab-eating macaque68X 152835861 SyntenicNet85.675% 3000 medium
08papAnu2 63,250 2,948,380,7102,893,250,291 55,130,419% 38.95 Baboon85X 139646187 RecipBest84.179% 3000 medium
09chlSab2 2,004 2,789,656,3282,752,000,999 37,655,329% 48.77 Green monkey95X 101219884 SyntenicNet84.393% 5000 medium
10calJac3 14,205 2,914,958,5442,752,505,800 162,452,744% 47.71 Marmoset6X 132174527 SyntenicNet71.709% 3000 medium
11saiBol1 2,685 2,608,572,0642,477,131,095 131,440,969% 46.69 Squirrel monkey80X 18744880 SyntenicNet70.565% 3000 medium
12otoGar3 7,793 2,519,724,5502,359,530,453 160,194,097% 39.51 Bushbaby137X 13852661 SyntenicNet53.196% 3000 medium
13tupChi1 50,750 2,846,580,2352,706,389,135 140,191,100% 40.02 Chinese tree shrew80X 3670124 SyntenicNet45.256% 3000 medium
14speTri2 12,483 2,478,393,7702,311,060,300 167,333,470% 36.27 Squirrel495X 8192786 SyntenicNet48.283% 3000 medium
15jacJac1 10,896 2,835,242,7672,470,259,869 364,982,898% 37.29 Lesser Egyptian jerboa78X 22080993 SyntenicNet34.153% 3000 medium
16micOch1 6,335 2,287,340,9432,104,321,675 183,019,268% 23.89 Prairie vole94X 61813736 SyntenicNet31.489% 3000 medium
17criGri1 52,711 2,360,146,4282,301,325,917 58,820,511% 27.06 Chinese hamster130X 1558295 SyntenicNet33.169% 3000 medium
18mesAur1 21,484 2,504,925,0392,076,176,254 428,748,785% 25.70 Golden hamster115X 12753307 SyntenicNet30.803% 3000 medium
19mm10 66 2,730,871,7742,652,783,500 78,088,274% 45.18 Mouse20X 130694993 SyntenicNet31.653% 3000 medium
20rn6 953 2,870,182,9092,729,860,805 140,322,104% 43.31 Rat10X 145729302 SyntenicNet31.077% 3000 medium
21hetGla2 4,229 2,618,204,6392,314,771,103 303,433,536% 32.31 Naked mole-rat90X 20532749 SyntenicNet46.248% 3000 medium
22cavPor3 3,144 2,723,219,6412,663,369,733 59,849,908% 27.53 Guinea pig6.76X 27942054 SyntenicNet42.371% 3000 medium
23chiLan1 2,838 2,390,852,3912,284,276,400 106,575,991% 30.82 Chinchilla87X 21893125 SyntenicNet45.665% 3000 medium
24octDeg1 7,134 2,995,882,9382,526,254,692 469,628,246% 26.47 Brush-tailed rat80X 12091372 SyntenicNet40.238% 3000 medium
25oryCun2 3,242 2,737,490,5012,604,023,284 133,467,217% 43.74 Rabbit6.51X 111795807 SyntenicNet42.911% 3000 medium
26ochPri3 10,420 2,229,835,7161,943,987,870 285,847,846% 29.53 Pika103X 26863993 SyntenicNet33.618% 3000 medium
27susScr3 4,583 2,808,525,9912,518,987,191 289,538,800% 44.30 Pig24X 148491826 RecipBest44.676% 3000 medium
28vicPac2 276,611 2,172,177,9942,078,582,856 93,595,138% 35.40 Alpaca22X 7263804 SyntenicNet48.909% 3000 medium
29camFer1 13,334 2,009,194,6091,985,416,433 23,778,176% 33.32 Bactrian camel30X 2005940 SyntenicNet49.095% 3000 medium
30turTru2 240,901 2,551,996,5732,332,402,443 219,594,130% 43.56 Dolphin3.5X 116261 RecipBest49.728% 3000 medium
31orcOrc1 1,668 2,372,919,8772,249,582,112 123,337,765% 42.47 Killer whale200X 12735091 SyntenicNet50.709% 3000 medium
32panHod1 15,059 2,696,886,3302,507,986,438 188,899,892% 42.51 Tibetan antelope67X 2772860 SyntenicNet45.619% 3000 medium
33bosTau8 3,179 2,670,044,5002,649,304,231 20,740,269% 48.69 Cow9X 105708250 SyntenicNet45.975% 3000 medium
34oviAri3 5,698 2,619,054,3882,534,335,866 84,718,522% 45.18 Sheep142X 100079507 SyntenicNet45.352% 3000 medium
35capHir1 77,021 2,635,848,9002,495,939,845 139,909,055% 43.55 Domestic goat86.64X 92306894 SyntenicNet45.257% 3000 medium
36equCab2 34 2,484,532,0622,428,790,173 55,741,889% 40.97 Horse6.8X 91571448 SyntenicNet55.459% 3000 medium
37cerSim1 3,087 2,464,367,1802,366,858,012 97,509,168% 38.80 White rhinoceros91X 26277727 SyntenicNet56.633% 3000 medium
38felCat8 267,625 2,641,342,2582,599,700,169 41,642,089% 44.41 Cat20X 142431058 SyntenicNet51.684% 3000 medium
39canFam3 3,268 2,410,976,8752,392,715,236 18,261,639% 43.01 Dog7.6X 63241923 SyntenicNet50.395% 3000 medium
40musFur1 7,741 2,410,758,0132,277,906,570 132,851,443% 38.98 Ferret 162X 9335154 SyntenicNet49.631% 3000 medium
41ailMel1 81,467 2,299,509,0152,245,312,831 54,196,184% 38.96 Panda73X 1281781 SyntenicNet48.226% 3000 medium
42odoRosDiv1 3,892 2,400,133,6282,300,235,509 99,898,119% 40.52 Pacific walrus200X 2616778 SyntenicNet52.193% 3000 medium
43lepWed1 16,711 3,156,902,7622,223,164,129 933,738,633% 40.09 Weddell seal82X 904031 RecipBest51.073% 3000 medium
44pteAle1 65,597 1,985,958,7071,944,625,202 41,333,505% 32.56 Black flying-fox110X 15954802 SyntenicNet48.281% 3000 medium
45pteVam1 96,944 1,996,076,4101,839,436,660 156,639,750% 31.75 Megabat2X 124060 RecipBest43.924% 3000 medium
46eptFus1 6,788 2,026,627,1851,811,378,799 215,248,386% 24.11 Big brown bat84X 13454942 SyntenicNet39.123% 3000 medium
47myoDav1 101,769 2,059,799,7081,878,461,987 181,337,721% 23.35 David's myotis (bat)110X 3454484 SyntenicNet38.713% 3000 medium
48myoLuc2 11,654 2,034,575,3001,966,419,868 68,155,432% 33.71 Microbat2.18X 4293315 SyntenicNet38.591% 3000 medium
49eriEur2 5,803 2,715,720,9252,333,073,535 382,647,390% 45.60 Hedgehog79X 3264618 SyntenicNet25.488% 3000 medium
50sorAra2 12,845 2,423,158,1832,192,103,426 231,054,757% 32.76 Shrew120X 22794405 SyntenicNet26.905% 3000 medium
51conCri1 2,038 1,769,657,8971,682,542,007 87,115,890% 18.21 Star-nosed mole113.1X 55520359 SyntenicNet35.911% 3000 medium
52loxAfr3 2,353 3,196,760,8333,118,565,340 78,195,493% 47.63 Elephant7X 46401353 SyntenicNet45.214% 3000 medium
53eleEdw1 8,768 3,843,982,8613,315,871,847 528,111,014% 49.11 Cape elephant shrew62X 15011382 SyntenicNet26.839% 3000 medium
54triMan1 6,323 3,103,808,4062,769,099,677 334,708,729% 36.24 Manatee150X 14442683 SyntenicNet45.346% 3000 medium
55chrAsi1 20,500 4,210,110,4583,363,564,316 846,546,142% 20.11 Cape golden mole66X 13470186 RecipBest33.314% 3000 medium
56echTel2 8,402 2,947,024,2862,605,196,361 341,827,925% 28.26 Tenrec78X 45764842 SyntenicNet29.310% 3000 medium
57oryAfe1 22,509 4,444,080,5273,415,340,621 1,028,739,906% 31.09 Aardvark44X 7875832 RecipBest40.563% 3000 medium
58dasNov3 46,559 3,631,522,7113,299,882,028 331,640,683% 49.28 Armadillo6X 1687935 SyntenicNet45.349% 3000 medium
59monDom5 11 3,605,631,7283,501,660,299 103,971,429% 55.95 Opossum6.8X 527952102 Net14.370% 5000 loose
60sarHar1 35,974 3,174,693,0102,931,539,702 243,153,308% 39.66 Tasmanian devil85X 1847106 Net12.754% 5000 loose
61macEug2 277,711 3,075,184,0242,536,076,954 539,107,070% 47.39 Wallaby2X 36602 Net6.378% 5000 loose
62ornAna1 201,523 1,996,811,2121,842,235,522 154,575,690% 47.89 Platypus6X 991605 Net7.769% 5000 loose
63colLiv1 14,923 1,107,989,0851,086,925,875 21,063,210% 19.83 Rock pigeon60X 3148738 Net4.712% 5000 loose
64falChe1 5,863 1,174,811,7151,150,993,769 23,817,946% 18.62 Saker falcon147X 4154532 Net4.828% 5000 loose
65falPer1 7,021 1,171,973,4311,153,404,348 18,569,083% 18.69 Peregrine falcon137.6X 3935757 Net4.926% 5000 loose
66ficAlb2 21,428 1,118,343,5871,102,323,882 16,019,705% 24.04 Collared flycatcher60X 64724594 Net4.822% 5000 loose
67zonAlb1 6,018 1,052,600,5611,006,293,510 46,307,051% 20.03 White-throated sparrow63X 4866725 Net4.494% 5000 loose
68geoFor1 27,239 1,065,292,1811,041,286,029 24,006,152% 19.99 Medium ground finch115X 5255844 Net4.445% 5000 loose
69taeGut2 37,096 1,232,135,5911,222,864,691 9,270,900% 8.11 Zebra finch5.5X 62374962 Net5.893% 5000 loose
70pseHum1 5,406 1,042,997,6321,030,030,436 12,967,196% 20.21 Tibetan ground jay96.25X 16337386 Net5.146% 5000 loose
71melUnd1 25,212 1,117,373,6191,086,614,815 30,758,804% 19.62 Budgerigar7X 10614383 Net4.474% 5000 loose
72amaVit1 182,974 1,175,404,0421,128,255,752 47,148,290% 18.36 Parrot24X 19239 Net4.186% 5000 loose
73araMac1 192,790 1,204,700,227997,522,769 207,177,458% 16.49 Scarlet Macaw26X 15974 Net3.787% 5000 loose
74anaPla1 78,488 1,105,052,3511,069,972,754 35,079,597% 20.21 Mallard duck60X 1233631 Net4.268% 5000 loose
75galGal4 15,932 1,046,932,0991,032,854,810 14,077,289% 20.41 Chicken12X 90216835 Net4.696% 5000 loose
76melGal1 5,891 1,061,817,101935,922,386 125,894,715% 6.60 Turkey5X 74864452 Net4.328% 5000 loose
77allMis1 14,645 2,174,259,8882,128,720,123 45,539,765% 37.18 American alligator68X 508966 Net7.561% 5000 loose
78cheMyd1 140,023 2,208,410,3772,110,381,997 98,028,380% 29.65 Green seaturtle110X 3864108 Net6.296% 5000 loose
79chrPic2 78,595 2,365,766,5622,173,204,089 192,562,473% 31.52 Painted turtle15X 7072151 Net6.708% 5000 loose
80pelSin1 19,904 2,202,483,7522,106,639,384 95,844,368% 33.82 Chinese softshell turtle105X 3350749 Net5.716% 5000 loose
81apaSpi1 286,620 1,931,078,8471,877,982,184 53,096,663% 29.87 Spiny softshell turtle33.4X 2306994 Net4.611% 5000 loose
82anoCar2 6,457 1,799,143,5871,701,353,767 97,789,820% 41.98 Lizard7.1X 150641573 Net3.593% 5000 loose
83xenTro7 7,728 1,437,530,8791,365,936,747 71,594,132% 33.98 X. tropicalis7.44X 124127367 Net3.811% 5000 loose
84latCha1 22,819 2,860,591,9212,183,592,768 676,999,153% 45.68 Coelacanth77.5X 924513 Net2.873% 5000 loose
85tetNig2 27 358,618,246302,314,788 56,303,458% 20.27 Tetraodon7.9X 13390619 Net1.743% 5000 loose
86fr3 6,835 391,484,715350,961,831 40,522,884% 19.01 Fugu8.5X 11516971 Net1.784% 5000 loose
87takFla1 34,223 377,992,166314,409,984 63,582,182% 17.77 Yellowbelly pufferfish131X 315240 Net1.548% 5000 loose
88oreNil2 5,678 927,696,114816,084,674 111,611,440% 25.51 Nile tilapia269X 27159252 Net1.868% 5000 loose
89neoBri1 9,083 847,883,811685,897,279 161,986,532% 24.12 Princess of Burundi171X 4430025 Net1.767% 5000 loose
90hapBur1 7,994 831,398,301698,936,397 132,461,904% 24.10 Burton's mouthbreeder131X 1194190 Net1.783% 5000 loose
91mayZeb1 3,725 849,595,388713,527,863 136,067,525% 25.04 Zebra Mbuna129.7X 3702874 Net1.805% 5000 loose
92punNye1 7,233 830,129,318698,757,151 131,372,167% 24.56 Pundamilia nyererei126X 2525540 Net1.787% 5000 loose
93oryLat2 7,189 869,000,216700,386,597 168,613,619% 33.09 Medaka10.6X 29908082 Net2.002% 5000 loose
94xipMac1 20,632 729,664,433652,811,251 76,853,182% 26.62 Southern platyfish19.6X 1303070 Net1.898% 5000 loose
95gasAcu1 23 463,354,448446,627,861 16,726,587% 2.58 Stickleback6X 20083130 Net2.080% 5000 loose
96gadMor1 427,428 824,327,835608,038,555 216,289,280% 31.25 Atlantic cod40X 393166 Net1.660% 5000 loose
97danRer10 1,061 1,371,719,3831,369,631,918 2,087,465% 52.32 Zebrafish30X 53345113 Net3.357% 5000 loose
98astMex1 10,736 1,191,259,254964,251,514 227,007,740% 39.11 Mexican tetra (cavefish)70X 1775308 Net2.225% 5000 loose
99lepOcu1 1,925 945,874,548869,414,359 76,460,189% 24.85 Spotted gar677.5X 50348508 Net2.511% 5000 loose
100petMar2 25,006 885,550,958647,368,134 238,182,824% 42.47 Lamprey5.0X 184619 Net1.265% 5000 loose