UCSC to RefSeq correspondence: Difference between revisions

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<p>The correspondence indicated here is exact.  Each sequence
The correspondences show here are ''exact, subset'',
in both assemblies id identical. Future improvement to this table
and ''near match''.  NCBI assemblies with no equivalent UCSC database
will indicate subsets, when one assembly is a complete subset of
are listed.
the other, and partial matches when one assembly is mostly
 
identical to the other.</p>
The columns can be sorted.  Click on the small arrow
<p>The external links go to:
icon next to the column header label.
<ul>
 
<li> UCSC browser - genome-test genome browser</li>
The external links go to:
<li> Entrez assembly - assembly information page at NCBI</li>
* test browser - genome-test.soe.ucsc.edu genome browser
<li> NCBI FTP - ftp directory at NCBI where the assembly can be obtained</li>
** public browser - when available the genome.ucsc.edu browser
</ul></p>
* RefSeq assembly - assembly information page at NCBI for the refseq version
** Genbank assembly - assembly information page at NCBI when equivalent, genbank version
* RefSeq FTP - ftp directory at NCBI where the RefSeq assembly can be obtained
** Genbank FTP - ftp directory for the genbank version when equivalent
 
 
Note about the <span style='color:red'>(has dups ''N'')</span> indication.
Some older assemblies have entire sequences duplicated in multiple contigs
in both the NCBI assembly and the UCSC assembly.  Most newer UCSC assemblies
have removed the duplicate contigs, and newer NCBI assemblies now also
remove the duplicate contigs.  The ''N'' indicates how many duplicate
sequences are in the assembly.  These duplicate contigs will cause
confusion when coordinating chromosome names.
 
Note about the <span style='color:green'>(subset ''N'' of ''M'')</span> indication.
When all contigs of one assembly are completely found in the other assembly,
it is marked as a <span style='color:green'>(subset ''N'' of ''M'')</span>.  This is
often the result of one assembly including a '''chrM/chrMT''' sequence,
or duplicate sequences removed from one of the assemblies.  The
''N'' of ''M'' counts the number of sequences in the subset vs. the
superset after duplicate sequences have been removed.
 
Note about the <span style='color:green'>(near match ''N'' of ''M'')</span> indication.
When ''almost'' all contigs of one assembly are completely found in the other
assembly, it is marked as a <span style='color:green'>
(near match ''N'' of ''M'')</span>.
This is often the result of different sequences for '''chrM/chrMT''',
included in each of the assemblies, or a different combination rearrangement
of sequences in one assembly.  For example '''monDom5''' at UCSC combines
all ''unplaced'' contigs into a single '''chrUn''' sequence whereas NCBI
keeps those contigs as separate sequences. The
''N'' of ''M'' counts the number of sequences identical vs. the
total sequences in the other assembly.  The limit in this notation
is a maximum difference of two sequences in the smaller assembly, and only
for vertebrate_mammalian and vertebrate_other assemblies.
 
 
NCBI assemblies for the sub-groups ''vertebrate_mammalian'' and
''vertebrate_other'' with no equivalent UCSC database are indicated
as <span style='color:orange'>(''N'' sequences)</span> where ''N'' is
the number of sequences in the NCBI assembly.
 
{| border='1' style='border-collapse:collapse' class='wikitable sortable'
{| border='1' style='border-collapse:collapse' class='wikitable sortable'
|+ UCSC to Genbank assembly accession correspondence
|+ UCSC to Genbank assembly accession correspondence
! count
! count
! UCSC browser
! test browser
public browser
! scientific name(s)
! scientific name(s)
! common name
! common name
! Entrez assembly
! RefSeq assembly
! NCBI FTP
Genbank assembly
! RefSeq FTP
Genbank FTP
|-
|-
! 1
! 1
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=CHM1 CHM1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=CHM1 CHM1]
| mole<br>Homo&nbsp;sapiens
| Homo&nbsp;sapiens
| Homo sapiens hydatidiform mole assembly chm1
| Homo sapiens hydatidiform mole assembly chm1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000306695.2/ GCF_000306695.2_CHM1_1.1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000306695.2/ GCF_000306695.2_CHM1_1.1]
Line 28: Line 72:
! 2
! 2
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ailMel1 ailMel1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ailMel1 ailMel1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=ailMel1 public]
| Ailuropoda&nbsp;melanoleuca
| Ailuropoda&nbsp;melanoleuca
| Panda
| Panda
Line 35: Line 80:
! 3
! 3
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=balAcu1 balAcu1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=balAcu1 balAcu1]
| Balaenoptera&nbsp;acutorostrata&nbsp;scammoni<br>Balaenoptera&nbsp;acutorostrata
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=balAcu1 public]
| Balaenoptera&nbsp;acutorostrata
| Minke whale
| Minke whale
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000493695.1/ GCF_000493695.1_BalAcu1.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000493695.1/ GCF_000493695.1_BalAcu1.0]
Line 42: Line 88:
! 4
! 4
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau8 bosTau8]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau8 bosTau8]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=bosTau8 public]
| Bos&nbsp;taurus
| Bos&nbsp;taurus
| Cow
| Cow
Line 56: Line 103:
! 6
! 6
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calJac3 calJac3]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calJac3 calJac3]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=calJac3 public]
| Callithrix&nbsp;jacchus
| Callithrix&nbsp;jacchus
| Marmoset
| Marmoset
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000004665.1/ GCF_000004665.1_Callithrix_jacchus-3.2]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000004665.1/ GCF_000004665.1_Callithrix_jacchus-3.2]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000004665.1/ GCA_000004665.1_Callithrix_jacchus-3.2]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Callithrix_jacchus/all_assembly_versions/GCF_000004665.1_Callithrix_jacchus-3.2/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Callithrix_jacchus/all_assembly_versions/GCF_000004665.1_Callithrix_jacchus-3.2/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Callithrix_jacchus/all_assembly_versions/GCA_000004665.1_Callithrix_jacchus-3.2/ GCA_000004665.1]
|-
|-
! 7
! 7
Line 70: Line 121:
! 8
! 8
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam3 canFam3]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam3 canFam3]
| Canis&nbsp;lupus&nbsp;familiaris<br>Canis&nbsp;lupus
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=canFam3 public]
| Canis&nbsp;lupus
| Dog
| Dog
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002285.3/ GCF_000002285.3_CanFam3.1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002285.3/ GCF_000002285.3_CanFam3.1]
Line 84: Line 136:
! 10
! 10
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cavPor3 cavPor3]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cavPor3 cavPor3]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=cavPor3 public]
| Cavia&nbsp;porcellus
| Cavia&nbsp;porcellus
| Guinea pig
| Guinea pig
Line 91: Line 144:
! 11
! 11
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cerSim1 cerSim1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cerSim1 cerSim1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=cerSim1 public]
| Ceratotherium&nbsp;simum
| Ceratotherium&nbsp;simum
| White rhinoceros
| White rhinoceros
Line 112: Line 166:
! 14
! 14
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colAng1 colAng1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colAng1 colAng1]
| Colobus&nbsp;angolensis&nbsp;palliatus<br>Colobus&nbsp;angolensis
| Colobus&nbsp;angolensis
| Angolan colobus
| Angolan colobus
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000951035.1/ GCF_000951035.1_Cang.pa_1.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000951035.1/ GCF_000951035.1_Cang.pa_1.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000951035.1/ GCA_000951035.1_Cang.pa_1.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Colobus_angolensis/all_assembly_versions/GCF_000951035.1_Cang.pa_1.0/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Colobus_angolensis/all_assembly_versions/GCF_000951035.1_Cang.pa_1.0/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Colobus_angolensis/all_assembly_versions/GCA_000951035.1_Cang.pa_1.0/ GCA_000951035.1]
|-
|-
! 15
! 15
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dasNov3 dasNov3]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dasNov3 dasNov3]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=dasNov3 public]
| Dasypus&nbsp;novemcinctus
| Dasypus&nbsp;novemcinctus
| Armadillo
| Armadillo
Line 126: Line 184:
! 16
! 16
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=echTel2 echTel2]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=echTel2 echTel2]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=echTel2 public]
| Echinops&nbsp;telfairi
| Echinops&nbsp;telfairi
| Tenrec
| Tenrec
Line 136: Line 195:
| Cape elephant shrew
| Cape elephant shrew
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000299155.1/ GCF_000299155.1_EleEdw1.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000299155.1/ GCF_000299155.1_EleEdw1.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000299155.1/ GCA_000299155.1_EleEdw1.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Elephantulus_edwardii/all_assembly_versions/GCF_000299155.1_EleEdw1.0/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Elephantulus_edwardii/all_assembly_versions/GCF_000299155.1_EleEdw1.0/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Elephantulus_edwardii/all_assembly_versions/GCA_000299155.1_EleEdw1.0/ GCA_000299155.1]
|-
|-
! 18
! 18
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eriEur2 eriEur2]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eriEur2 eriEur2]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=eriEur2 public]
| Erinaceus&nbsp;europaeus
| Erinaceus&nbsp;europaeus
| Hedgehog
| Hedgehog
Line 146: Line 209:
|-
|-
! 19
! 19
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat5 felCat5]
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat5 felCat5]
(has dups: 1)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=felCat5 public]
| Felis&nbsp;catus
| Felis&nbsp;catus
| Cat
| Cat
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000181335.1/ GCF_000181335.1_Felis_catus-6.2]
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000181335.1/ GCF_000181335.1_Felis_catus-6.2]
(has dups: 1)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Felis_catus/all_assembly_versions/GCF_000181335.1_Felis_catus-6.2/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Felis_catus/all_assembly_versions/GCF_000181335.1_Felis_catus-6.2/ vertebrate_mammalian]
|-
|-
! 20
! 20
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat8 felCat8]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat8 felCat8]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=felCat8 public]
| Felis&nbsp;catus
| Felis&nbsp;catus
| Cat
| Cat
Line 161: Line 228:
! 21
! 21
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galVar1 galVar1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galVar1 galVar1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=galVar1 public]
| Galeopterus&nbsp;variegatus
| Galeopterus&nbsp;variegatus
| Malayan flying lemur
| Malayan flying lemur
Line 168: Line 236:
! 22
! 22
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetGla2 hetGla2]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetGla2 hetGla2]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=hetGla2 public]
| Heterocephalus&nbsp;glaber
| Heterocephalus&nbsp;glaber
| Naked mole-rat
| Naked mole-rat
Line 175: Line 244:
! 23
! 23
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hg38 hg38]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hg38 hg38]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38 public]
| Homo&nbsp;sapiens
| Homo&nbsp;sapiens
| Human
| Human
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.26/ GCF_000001405.26_GRCh38]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.26/ GCF_000001405.26_GRCh38]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000001405.15/ GCA_000001405.15_GRCh38]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.26_GRCh38/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.26_GRCh38/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCA_000001405.15_GRCh38/ GCA_000001405.15]
|-
|-
! 24
! 24
Line 196: Line 269:
! 26
! 26
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macFas5 macFas5]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macFas5 macFas5]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=macFas5 public]
| Macaca&nbsp;fascicularis
| Macaca&nbsp;fascicularis
| Crab-eating macaque
| Crab-eating macaque
Line 210: Line 284:
! 28
! 28
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur2 micMur2]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur2 micMur2]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=micMur2 public]
| Microcebus&nbsp;murinus
| Microcebus&nbsp;murinus
| Mouse lemur
| Mouse lemur
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000165445.1/ GCF_000165445.1_Mmur_2.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000165445.1/ GCF_000165445.1_Mmur_2.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000165445.2/ GCA_000165445.2_Mmur_2.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Microcebus_murinus/all_assembly_versions/GCF_000165445.1_Mmur_2.0/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Microcebus_murinus/all_assembly_versions/GCF_000165445.1_Mmur_2.0/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Microcebus_murinus/all_assembly_versions/GCA_000165445.2_Mmur_2.0/ GCA_000165445.2]
|-
|-
! 29
! 29
Line 220: Line 298:
| Prairie vole
| Prairie vole
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000317375.1/ GCF_000317375.1_MicOch1.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000317375.1/ GCF_000317375.1_MicOch1.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000317375.1/ GCA_000317375.1_MicOch1.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Microtus_ochrogaster/all_assembly_versions/GCF_000317375.1_MicOch1.0/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Microtus_ochrogaster/all_assembly_versions/GCF_000317375.1_MicOch1.0/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Microtus_ochrogaster/all_assembly_versions/GCA_000317375.1_MicOch1.0/ GCA_000317375.1]
|-
|-
! 30
! 30
Line 227: Line 308:
| Brandt's myotis (bat)
| Brandt's myotis (bat)
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000412655.1/ GCF_000412655.1_ASM41265v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000412655.1/ GCF_000412655.1_ASM41265v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000412655.1/ GCA_000412655.1_ASM41265v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Myotis_brandtii/all_assembly_versions/GCF_000412655.1_ASM41265v1/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Myotis_brandtii/all_assembly_versions/GCF_000412655.1_ASM41265v1/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Myotis_brandtii/all_assembly_versions/GCA_000412655.1_ASM41265v1/ GCA_000412655.1]
|-
|-
! 31
! 31
Line 234: Line 318:
| David's myotis (bat)
| David's myotis (bat)
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000327345.1/ GCF_000327345.1_ASM32734v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000327345.1/ GCF_000327345.1_ASM32734v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000327345.1/ GCA_000327345.1_ASM32734v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Myotis_davidii/all_assembly_versions/GCF_000327345.1_ASM32734v1/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Myotis_davidii/all_assembly_versions/GCF_000327345.1_ASM32734v1/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Myotis_davidii/all_assembly_versions/GCA_000327345.1_ASM32734v1/ GCA_000327345.1]
|-
|-
! 32
! 32
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoLuc2 myoLuc2]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoLuc2 myoLuc2]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=myoLuc2 public]
| Myotis&nbsp;lucifugus
| Myotis&nbsp;lucifugus
| Microbat
| Microbat
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000147115.1/ GCF_000147115.1_Myoluc2.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000147115.1/ GCF_000147115.1_Myoluc2.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000147115.1/ GCA_000147115.1_Myoluc2.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Myotis_lucifugus/all_assembly_versions/GCF_000147115.1_Myoluc2.0/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Myotis_lucifugus/all_assembly_versions/GCF_000147115.1_Myoluc2.0/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Myotis_lucifugus/all_assembly_versions/GCA_000147115.1_Myoluc2.0/ GCA_000147115.1]
|-
|-
! 33
! 33
Line 255: Line 346:
| Killer whale
| Killer whale
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000331955.2/ GCF_000331955.2_Oorc_1.1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000331955.2/ GCF_000331955.2_Oorc_1.1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000331955.2/ GCA_000331955.2_Oorc_1.1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Orcinus_orca/all_assembly_versions/GCF_000331955.2_Oorc_1.1/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Orcinus_orca/all_assembly_versions/GCF_000331955.2_Oorc_1.1/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Orcinus_orca/all_assembly_versions/GCA_000331955.2_Oorc_1.1/ GCA_000331955.2]
|-
|-
! 35
! 35
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryAfe1 oryAfe1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryAfe1 oryAfe1]
| Orycteropus&nbsp;afer&nbsp;afer<br>Orycteropus&nbsp;afer
| Orycteropus&nbsp;afer
| Aardvark
| Aardvark
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000298275.1/ GCF_000298275.1_OryAfe1.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000298275.1/ GCF_000298275.1_OryAfe1.0]
Line 265: Line 359:
|-
|-
! 36
! 36
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=otoGar3 otoGar3]
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=otoGar3 otoGar3]
(has dups: 139)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=otoGar3 public]
| Otolemur&nbsp;garnettii
| Otolemur&nbsp;garnettii
| Bushbaby
| Bushbaby
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000181295.1/ GCF_000181295.1_OtoGar3]
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000181295.1/ GCF_000181295.1_OtoGar3]
(has dups: 139)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000181295.3/ GCA_000181295.3_OtoGar3]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Otolemur_garnettii/all_assembly_versions/GCF_000181295.1_OtoGar3/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Otolemur_garnettii/all_assembly_versions/GCF_000181295.1_OtoGar3/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Otolemur_garnettii/all_assembly_versions/GCA_000181295.3_OtoGar3/ GCA_000181295.3]
|-
|-
! 37
! 37
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oviAri3 oviAri3]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oviAri3 oviAri3]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=oviAri3 public]
| Ovis&nbsp;aries
| Ovis&nbsp;aries
| Sheep
| Sheep
Line 287: Line 388:
! 39
! 39
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panPan1 panPan1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panPan1 panPan1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=panPan1 public]
| Pan&nbsp;paniscus
| Pan&nbsp;paniscus
| Bonobo
| Bonobo
Line 301: Line 403:
! 41
! 41
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTig1 panTig1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTig1 panTig1]
| Panthera&nbsp;tigris&nbsp;altaica<br>Panthera&nbsp;tigris
| Panthera&nbsp;tigris
| Amur tiger
| Amur tiger
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000464555.1/ GCF_000464555.1_PanTig1.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000464555.1/ GCF_000464555.1_PanTig1.0]
Line 308: Line 410:
! 42
! 42
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro4 panTro4]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro4 panTro4]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=panTro4 public]
| Pan&nbsp;troglodytes
| Pan&nbsp;troglodytes
| Chimp
| Chimp
Line 322: Line 425:
! 44
! 44
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=papAnu2 papAnu2]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=papAnu2 papAnu2]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=papAnu2 public]
| Papio&nbsp;anubis
| Papio&nbsp;anubis
| Baboon
| Baboon
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000264685.1/ GCF_000264685.1_Panu_2.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000264685.1/ GCF_000264685.1_Panu_2.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000264685.1/ GCA_000264685.1_Panu_2.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Papio_anubis/all_assembly_versions/GCF_000264685.1_Panu_2.0/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Papio_anubis/all_assembly_versions/GCF_000264685.1_Panu_2.0/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Papio_anubis/all_assembly_versions/GCA_000264685.1_Panu_2.0/ GCA_000264685.1]
|-
|-
! 45
! 45
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=perManBai1 perManBai1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=perManBai1 perManBai1]
| Peromyscus&nbsp;maniculatus&nbsp;bairdii<br>Peromyscus&nbsp;maniculatus
| Peromyscus&nbsp;maniculatus
| Prairie deer mouse
| Prairie deer mouse
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000500345.1/ GCF_000500345.1_Pman_1.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000500345.1/ GCF_000500345.1_Pman_1.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000500345.1/ GCA_000500345.1_Pman_1.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Peromyscus_maniculatus/all_assembly_versions/GCF_000500345.1_Pman_1.0/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Peromyscus_maniculatus/all_assembly_versions/GCF_000500345.1_Pman_1.0/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Peromyscus_maniculatus/all_assembly_versions/GCA_000500345.1_Pman_1.0/ GCA_000500345.1]
|-
|-
! 46
! 46
Line 343: Line 453:
! 47
! 47
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac8 rheMac8]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac8 rheMac8]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=rheMac8 public]
| Macaca&nbsp;mulatta
| Macaca&nbsp;mulatta
| Rhesus
| Rhesus
Line 364: Line 475:
! 50
! 50
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sarHar1 sarHar1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sarHar1 sarHar1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=sarHar1 public]
| Sarcophilus&nbsp;harrisii
| Sarcophilus&nbsp;harrisii
| Tasmanian devil
| Tasmanian devil
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000189315.1/ GCF_000189315.1_Devil_ref_v7.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000189315.1/ GCF_000189315.1_Devil_ref_v7.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000189315.1/ GCA_000189315.1_Devil_ref_v7.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Sarcophilus_harrisii/all_assembly_versions/GCF_000189315.1_Devil_ref_v7.0/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Sarcophilus_harrisii/all_assembly_versions/GCF_000189315.1_Devil_ref_v7.0/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Sarcophilus_harrisii/all_assembly_versions/GCA_000189315.1_Devil_ref_v7.0/ GCA_000189315.1]
|-
|-
! 51
! 51
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sorAra2 sorAra2]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sorAra2 sorAra2]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=sorAra2 public]
| Sorex&nbsp;araneus
| Sorex&nbsp;araneus
| Shrew
| Shrew
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000181275.1/ GCF_000181275.1_SorAra2.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000181275.1/ GCF_000181275.1_SorAra2.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000181275.2/ GCA_000181275.2_SorAra2.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Sorex_araneus/all_assembly_versions/GCF_000181275.1_SorAra2.0/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Sorex_araneus/all_assembly_versions/GCF_000181275.1_SorAra2.0/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Sorex_araneus/all_assembly_versions/GCA_000181275.2_SorAra2.0/ GCA_000181275.2]
|-
|-
! 52
! 52
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=speTri2 speTri2]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=speTri2 speTri2]
| Spermophilus&nbsp;tridecemlineatus<br>Ictidomys&nbsp;tridecemlineatus
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=speTri2 public]
| Ictidomys&nbsp;tridecemlineatus
| Squirrel
| Squirrel
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000236235.1/ GCF_000236235.1_SpeTri2.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000236235.1/ GCF_000236235.1_SpeTri2.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000236235.1/ GCA_000236235.1_SpeTri2.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ictidomys_tridecemlineatus/all_assembly_versions/GCF_000236235.1_SpeTri2.0/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ictidomys_tridecemlineatus/all_assembly_versions/GCF_000236235.1_SpeTri2.0/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Ictidomys_tridecemlineatus/all_assembly_versions/GCA_000236235.1_SpeTri2.0/ GCA_000236235.1]
|-
|-
! 53
! 53
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=susScr3 susScr3]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=susScr3 susScr3]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=susScr3 public]
| Sus&nbsp;scrofa
| Sus&nbsp;scrofa
| Pig
| Pig
Line 392: Line 516:
! 54
! 54
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarSyr2 tarSyr2]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarSyr2 tarSyr2]
| Tarsius&nbsp;syrichta<br>Carlito&nbsp;syrichta
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=tarSyr2 public]
| Carlito&nbsp;syrichta
| Tarsier
| Tarsier
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000164805.1/ GCF_000164805.1_Tarsius_syrichta-2.0.1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000164805.1/ GCF_000164805.1_Tarsius_syrichta-2.0.1]
Line 398: Line 523:
|-
|-
! 55
! 55
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarSyr2 tarSyr2]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=tarSyr2 public]
| Tarsius&nbsp;syrichta
| Tarsier
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000164805.1/ GCF_000164805.1_Tarsius_syrichta-2.0.1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Tarsius_syrichta/all_assembly_versions/GCF_000164805.1_Tarsius_syrichta-2.0.1/ vertebrate_mammalian]
|-
! 56
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triMan1 triMan1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triMan1 triMan1]
| Trichechus&nbsp;manatus&nbsp;latirostris<br>Trichechus&nbsp;manatus
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=triMan1 public]
| Trichechus&nbsp;manatus
| Manatee
| Manatee
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000243295.1/ GCF_000243295.1_TriManLat1.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000243295.1/ GCF_000243295.1_TriManLat1.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Trichechus_manatus/all_assembly_versions/GCF_000243295.1_TriManLat1.0/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Trichechus_manatus/all_assembly_versions/GCF_000243295.1_TriManLat1.0/ vertebrate_mammalian]
|-
|-
! 56
! 57
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tupChi1 tupChi1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tupChi1 tupChi1]
| Tupaia&nbsp;chinensis
| Tupaia&nbsp;chinensis
| Chinese tree shrew
| Chinese tree shrew
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000334495.1/ GCF_000334495.1_TupChi_1.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000334495.1/ GCF_000334495.1_TupChi_1.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000334495.1/ GCA_000334495.1_TupChi_1.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Tupaia_chinensis/all_assembly_versions/GCF_000334495.1_TupChi_1.0/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Tupaia_chinensis/all_assembly_versions/GCF_000334495.1_TupChi_1.0/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Tupaia_chinensis/all_assembly_versions/GCA_000334495.1_TupChi_1.0/ GCA_000334495.1]
|-
|-
! 57
! 58
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ursMar1 ursMar1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ursMar1 ursMar1]
| Ursus&nbsp;maritimus
| Ursus&nbsp;maritimus
Line 418: Line 555:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ursus_maritimus/all_assembly_versions/GCF_000687225.1_UrsMar_1.0/ vertebrate_mammalian]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ursus_maritimus/all_assembly_versions/GCF_000687225.1_UrsMar_1.0/ vertebrate_mammalian]
|-
|-
! 58
! 59
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm10 mm10]
(subset: 66 of 179)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10 public]
| Mus&nbsp;musculus
| Mouse
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001635.22/ GCF_000001635.22_GRCm38.p2]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mus_musculus/all_assembly_versions/GCF_000001635.22_GRCm38.p2/ vertebrate_mammalian]
|-
! 60
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm10 mm10]
(subset: 66 of 182)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10 public]
| Mus&nbsp;musculus
| Mouse
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001635.23/ GCF_000001635.23_GRCm38.p3]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mus_musculus/all_assembly_versions/GCF_000001635.23_GRCm38.p3/ vertebrate_mammalian]
|-
! 61
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm10 mm10]
(subset: 66 of 196)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10 public]
| Mus&nbsp;musculus
| Mouse
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001635.24/ GCF_000001635.24_GRCm38.p4]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mus_musculus/all_assembly_versions/GCF_000001635.24_GRCm38.p4/ vertebrate_mammalian]
|-
! 62
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm10 mm10]
(subset: 66 of 207)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10 public]
| Mus&nbsp;musculus
| Mouse
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001635.25/ GCF_000001635.25_GRCm38.p5]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mus_musculus/all_assembly_versions/GCF_000001635.25_GRCm38.p5/ vertebrate_mammalian]
|-
! 63
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn6 rn6]
(subset: 953 of 953)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=rn6 public]
| Rattus&nbsp;norvegicus
| Rat
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001895.5/ GCF_000001895.5_Rnor_6.0]
(has dups: 1)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Rattus_norvegicus/all_assembly_versions/GCF_000001895.5_Rnor_6.0/ vertebrate_mammalian]
|-
! 64
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor3 gorGor3]
(subset: 46823 of 50196)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=gorGor3 public]
| Gorilla&nbsp;gorilla
| Gorilla
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000151905.1/ GCF_000151905.1_gorGor3.1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Gorilla_gorilla/all_assembly_versions/GCF_000151905.1_gorGor3.1/ vertebrate_mammalian]
|-
! 65
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac2 vicPac2]
(subset: 276611 of 276611)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=vicPac2 public]
| Vicugna&nbsp;pacos
| Alpaca
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000164845.1/ GCF_000164845.1_Vicugna_pacos-2.0.1]
(has dups: 115)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Vicugna_pacos/all_assembly_versions/GCF_000164845.1_Vicugna_pacos-2.0.1/ vertebrate_mammalian]
|-
! 66
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=saiBol1 saiBol1]
(subset: 2685 of 2686)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=saiBol1 public]
| Saimiri&nbsp;boliviensis
| Squirrel monkey
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000235385.1/ GCF_000235385.1_SaiBol1.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000235385.1/ GCA_000235385.1_SaiBol1.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Saimiri_boliviensis/all_assembly_versions/GCF_000235385.1_SaiBol1.0/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Saimiri_boliviensis/all_assembly_versions/GCA_000235385.1_SaiBol1.0/ GCA_000235385.1]
 
|-
! 67
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=octDeg1 octDeg1]
(subset: 7134 of 7134)
| Octodon&nbsp;degus
| Brush-tailed rat
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000260255.1/ GCF_000260255.1_OctDeg1.0]
(has dups: 1)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Octodon_degus/all_assembly_versions/GCF_000260255.1_OctDeg1.0/ vertebrate_mammalian]
|-
! 68
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=conCri1 conCri1]
(subset: 2038 of 2038)
| Condylura&nbsp;cristata
| Star-nosed mole
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000260355.1/ GCF_000260355.1_ConCri1.0]
(has dups: 2)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Condylura_cristata/all_assembly_versions/GCF_000260355.1_ConCri1.0/ vertebrate_mammalian]
|-
! 69
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chiLan1 chiLan1]
(subset: 2838 of 2839)
| Chinchilla&nbsp;lanigera
| Chinchilla
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000276665.1/ GCF_000276665.1_ChiLan1.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000276665.1/ GCA_000276665.1_ChiLan1.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Chinchilla_lanigera/all_assembly_versions/GCF_000276665.1_ChiLan1.0/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Chinchilla_lanigera/all_assembly_versions/GCA_000276665.1_ChiLan1.0/ GCA_000276665.1]
 
|-
! 70
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=jacJac1 jacJac1]
(subset: 10896 of 10896)
| Jaculus&nbsp;jaculus
| Lesser Egyptian jerboa
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000280705.1/ GCF_000280705.1_JacJac1.0]
(has dups: 2)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Jaculus_jaculus/all_assembly_versions/GCF_000280705.1_JacJac1.0/ vertebrate_mammalian]
|-
! 71
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri3 ochPri3]
(subset: 10420 of 10420)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=ochPri3 public]
| Ochotona&nbsp;princeps
| Pika
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000292845.1/ GCF_000292845.1_OchPri3.0]
(has dups: 1)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ochotona_princeps/all_assembly_versions/GCF_000292845.1_OchPri3.0/ vertebrate_mammalian]
|-
! 72
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosMut1 bosMut1]
(subset: 41191 of 41192)
| Bos&nbsp;mutus
| Wild yak
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000298355.1/ GCF_000298355.1_BosGru_v2.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000298355.1/ GCA_000298355.1_BosGru_v2.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Bos_mutus/all_assembly_versions/GCF_000298355.1_BosGru_v2.0/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Bos_mutus/all_assembly_versions/GCA_000298355.1_BosGru_v2.0/ GCA_000298355.1]
 
|-
! 73
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eptFus1 eptFus1]
(subset: 6788 of 6788)
| Eptesicus&nbsp;fuscus
| Big brown bat
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000308155.1/ GCF_000308155.1_EptFus1.0]
(has dups: 1)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Eptesicus_fuscus/all_assembly_versions/GCF_000308155.1_EptFus1.0/ vertebrate_mammalian]
|-
! 74
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteAle1 pteAle1]
(subset: 65597 of 65598)
| Pteropus&nbsp;alecto
| Black flying-fox
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000325575.1/ GCF_000325575.1_ASM32557v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000325575.1/ GCA_000325575.1_ASM32557v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Pteropus_alecto/all_assembly_versions/GCF_000325575.1_ASM32557v1/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Pteropus_alecto/all_assembly_versions/GCA_000325575.1_ASM32557v1/ GCA_000325575.1]
 
|-
! 75
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr3 loxAfr3]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=loxAfr3 public]
| Loxodonta&nbsp;africana
| Elephant
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001905.1/ GCF_000001905.1_Loxafr3.0]
(subset: 2352 of 2353)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Loxodonta_africana/all_assembly_versions/GCF_000001905.1_Loxafr3.0/ vertebrate_mammalian]
|-
! 76
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna1 ornAna1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=ornAna1 public]
| Ornithorhynchus&nbsp;anatinus
| Platypus
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002275.2/ GCF_000002275.2_Ornithorhynchus_anatinus_5.0.1]
(subset: 200154 of 201523)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ornithorhynchus_anatinus/all_assembly_versions/GCF_000002275.2_Ornithorhynchus_anatinus_5.0.1/ vertebrate_mammalian]
|-
! 77
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau6 bosTau6]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=bosTau6 public]
| Bos&nbsp;taurus
| Cow
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000003055.6/ GCF_000003055.6_Bos_taurus_UMD_3.1.1]
(subset: 3144 of 3317)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Bos_taurus/all_assembly_versions/GCF_000003055.6_Bos_taurus_UMD_3.1.1/ vertebrate_mammalian]
|-
! 78
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryCun2 oryCun2]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=oryCun2 public]
| Oryctolagus&nbsp;cuniculus
| Rabbit
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000003625.3/ GCF_000003625.3_OryCun2.0]
(subset: 3241 of 3242)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Oryctolagus_cuniculus/all_assembly_versions/GCF_000003625.3_OryCun2.0/ vertebrate_mammalian]
|-
! 79
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu3 nomLeu3]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=nomLeu3 public]
| Nomascus&nbsp;leucogenys
| Gibbon
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000146795.2/ GCF_000146795.2_Nleu_3.0]
(subset: 17484 of 17492)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000146795.3/ GCA_000146795.3_Nleu_3.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Nomascus_leucogenys/all_assembly_versions/GCF_000146795.2_Nleu_3.0/ vertebrate_mammalian]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Nomascus_leucogenys/all_assembly_versions/GCA_000146795.3_Nleu_3.0/ GCA_000146795.3]
 
|-
! 80
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=turTru2 turTru2]
(has dups: 9)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=turTru2 public]
| Tursiops&nbsp;truncatus
| Dolphin
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000151865.2/ GCF_000151865.2_Ttru_1.4]
(has dups: 9)
(subset: 240548 of 240891)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Tursiops_truncatus/all_assembly_versions/GCF_000151865.2_Ttru_1.4/ vertebrate_mammalian]
|-
! 81
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac2 vicPac2]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=vicPac2 public]
| Vicugna&nbsp;pacos
| Alpaca
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000164845.2/ GCF_000164845.2_Vicugna_pacos-2.0.2]
(has dups: 115)
(subset: 276610 of 276611)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Vicugna_pacos/all_assembly_versions/GCF_000164845.2_Vicugna_pacos-2.0.2/ vertebrate_mammalian]
|-
! 82
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=criGri1 criGri1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=criGri1 public]
| Cricetulus&nbsp;griseus
| Chinese hamster
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000419365.1/ GCF_000419365.1_C_griseus_v1.0]
(subset: 52710 of 52711)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Cricetulus_griseus/all_assembly_versions/GCF_000419365.1_C_griseus_v1.0/ vertebrate_mammalian]
|-
! 83
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bisBis1 bisBis1]
| Bison&nbsp;bison
| Bison
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000754665.1/ GCF_000754665.1_Bison_UMD1.0]
(subset: 128431 of 450182)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Bison_bison/all_assembly_versions/GCF_000754665.1_Bison_UMD1.0/ vertebrate_mammalian]
|-
! 84
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro3 panTro3]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=panTro3 public]
| Pan&nbsp;troglodytes
| Chimp
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001515.5/ GCF_000001515.5_Pan_troglodytes-2.1.4]
(near match: 24127 of 24129)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Pan_troglodytes/all_assembly_versions/GCF_000001515.5_Pan_troglodytes-2.1.4/ vertebrate_mammalian]
|-
! 85
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna2 ornAna2]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=ornAna2 public]
| Ornithorhynchus&nbsp;anatinus
| Platypus
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002275.2/ GCF_000002275.2_Ornithorhynchus_anatinus_5.0.1]
(near match: 200153 of 200154)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ornithorhynchus_anatinus/all_assembly_versions/GCF_000002275.2_Ornithorhynchus_anatinus_5.0.1/ vertebrate_mammalian]
|-
! 86
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac2 rheMac2]
(near match: 21 of 22)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=rheMac2 public]
| Macaca&nbsp;mulatta
| Rhesus
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002255.3/ GCF_000002255.3_Mmul_051212]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Macaca_mulatta/all_assembly_versions/GCF_000002255.3_Mmul_051212/ vertebrate_mammalian]
|-
! 87
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom5 monDom5]
(near match: 10 of 11)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=monDom5 public]
| Monodelphis&nbsp;domestica
| Opossum
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002295.2/ GCF_000002295.2_MonDom5]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Monodelphis_domestica/all_assembly_versions/GCF_000002295.2_MonDom5/ vertebrate_mammalian]
|-
! 88
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equCab2 equCab2]
(near match: 33 of 34)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=equCab2 public]
| Equus&nbsp;caballus
| Horse
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002305.2/ GCF_000002305.2_EquCab2.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Equus_caballus/all_assembly_versions/GCF_000002305.2_EquCab2.0/ vertebrate_mammalian]
|-
! 89
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau7 bosTau7]
(near match: 11691 of 11692)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=bosTau7 public]
| Bos&nbsp;taurus
| Cow
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000003205.5/ GCF_000003205.5_Btau_4.6.1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Bos_taurus/all_assembly_versions/GCF_000003205.5_Btau_4.6.1/ vertebrate_mammalian]
|-
! 90
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equPrz1 equPrz1]
(near match: 53096 of 53097)
| Equus&nbsp;przewalskii
| Przewalski horse
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000696695.1/ GCF_000696695.1_Burgud]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Equus_przewalskii/all_assembly_versions/GCF_000696695.1_Burgud/ vertebrate_mammalian]
|-
! 91
| notFound
| Mustela&nbsp;putorius&nbsp;furo
| notFound
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000215625.1/ GCF_000215625.1_MusPutFur1.0]
(0 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mustela_putorius_furo/all_assembly_versions/GCF_000215625.1_MusPutFur1.0/ vertebrate_mammalian]
|-
! 92
| notFound
| Equus_asinus
| Ass
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001305755.1/ GCF_001305755.1_ASM130575v1]
(2167 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Equus_asinus/all_assembly_versions/GCF_001305755.1_ASM130575v1/ vertebrate_mammalian]
|-
! 93
| notFound
| Homo_sapiens
| Human
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.28/ GCF_000001405.28_GRCh38.p2]
(486 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.28_GRCh38.p2/ vertebrate_mammalian]
|-
! 94
| notFound
| Camelus_dromedarius
| Arabian camel
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000767585.1/ GCF_000767585.1_PRJNA234474_Ca_dromedarius_V1.0]
(32573 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Camelus_dromedarius/all_assembly_versions/GCF_000767585.1_PRJNA234474_Ca_dromedarius_V1.0/ vertebrate_mammalian]
|-
! 95
| notFound
| Homo_sapiens
| Human
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.34/ GCF_000001405.34_GRCh38.p8]
(543 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.34_GRCh38.p8/ vertebrate_mammalian]
|-
! 96
| notFound
| Homo_sapiens
| Human
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.33/ GCF_000001405.33_GRCh38.p7]
(525 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.33_GRCh38.p7/ vertebrate_mammalian]
|-
! 97
| notFound
| Pongo_abelii
| Sumatran orangutan
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001545.4/ GCF_000001545.4_P_pygmaeus_2.0.2]
(61535 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Pongo_abelii/all_assembly_versions/GCF_000001545.4_P_pygmaeus_2.0.2/ vertebrate_mammalian]
|-
! 98
| notFound
| Orcinus_orca
| Killer whale
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000199955.1/ GCF_000199955.1_ASM19995v1]
(1 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Orcinus_orca/all_assembly_versions/GCF_000199955.1_ASM19995v1/ vertebrate_mammalian]
|-
! 99
| notFound
| Homo_sapiens
| Human
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.31/ GCF_000001405.31_GRCh38.p5]
(517 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.31_GRCh38.p5/ vertebrate_mammalian]
|-
! 100
| notFound
| Mus_musculus
| House mouse
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002165.2/ GCF_000002165.2_Mm_Celera]
(12503 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mus_musculus/all_assembly_versions/GCF_000002165.2_Mm_Celera/ vertebrate_mammalian]
|-
! 101
| notFound
| Mandrillus_leucophaeus
| Drill
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000951045.1/ GCF_000951045.1_Mleu.le_1.0]
(12821 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mandrillus_leucophaeus/all_assembly_versions/GCF_000951045.1_Mleu.le_1.0/ vertebrate_mammalian]
|-
! 102
| notFound
| Ailuropoda_melanoleuca
| Giant panda
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000004335.1/ GCF_000004335.1_AilMel_1.0]
(81466 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ailuropoda_melanoleuca/all_assembly_versions/GCF_000004335.1_AilMel_1.0/ vertebrate_mammalian]
|-
! 103
| notFound
| Camelus_bactrianus
| Bactrian camel
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000767855.1/ GCF_000767855.1_Ca_bactrianus_MBC_1.0]
(35455 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Camelus_bactrianus/all_assembly_versions/GCF_000767855.1_Ca_bactrianus_MBC_1.0/ vertebrate_mammalian]
|-
! 104
| notFound
| Ovis_aries
| Sheep
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000298735.2/ GCF_000298735.2_Oar_v4.0]
(5466 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ovis_aries/all_assembly_versions/GCF_000298735.2_Oar_v4.0/ vertebrate_mammalian]
|-
! 105
| notFound
| Homo_sapiens
| Human
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.30/ GCF_000001405.30_GRCh38.p4]
(510 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.30_GRCh38.p4/ vertebrate_mammalian]
|-
! 106
| notFound
| Ovis&nbsp;aries&nbsp;musimon
| notFound
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000765115.1/ GCF_000765115.1_Oori1]
(0 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Ovis_aries_musimon/all_assembly_versions/GCF_000765115.1_Oori1/ vertebrate_mammalian]
|-
! 107
| notFound
| Rattus_norvegicus
| Norway rat
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002265.2/ GCF_000002265.2_Rn_Celera]
(has dups: 5)
(7041 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Rattus_norvegicus/all_assembly_versions/GCF_000002265.2_Rn_Celera/ vertebrate_mammalian]
|-
! 108
| notFound
| Homo_sapiens
| Human
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.29/ GCF_000001405.29_GRCh38.p3]
(494 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.29_GRCh38.p3/ vertebrate_mammalian]
|-
! 109
| notFound
| Manis_javanica
| Malayan pangolin
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001685135.1/ GCF_001685135.1_ManJav1.0]
(80670 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Manis_javanica/all_assembly_versions/GCF_001685135.1_ManJav1.0/ vertebrate_mammalian]
|-
! 110
| notFound
| Dipodomys_ordii
| Ord's kangaroo rat
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000151885.1/ GCF_000151885.1_Dord_2.0]
(65193 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Dipodomys_ordii/all_assembly_versions/GCF_000151885.1_Dord_2.0/ vertebrate_mammalian]
|-
! 111
| notFound
| Miniopterus_natalensis
| Bats
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001595765.1/ GCF_001595765.1_Mnat.v1]
(1269 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Miniopterus_natalensis/all_assembly_versions/GCF_001595765.1_Mnat.v1/ vertebrate_mammalian]
|-
! 112
| notFound
| Pteropus_vampyrus
| Large flying fox
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000151845.1/ GCF_000151845.1_Pvam_2.0]
(36094 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Pteropus_vampyrus/all_assembly_versions/GCF_000151845.1_Pvam_2.0/ vertebrate_mammalian]
|-
! 113
| notFound
| Homo_sapiens
| Human
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.32/ GCF_000001405.32_GRCh38.p6]
(521 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.32_GRCh38.p6/ vertebrate_mammalian]
|-
! 114
| notFound
| Cebus&nbsp;capucinus&nbsp;imitator
| notFound
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001604975.1/ GCF_001604975.1_Cebus_imitator-1.0]
(0 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Cebus_capucinus_imitator/all_assembly_versions/GCF_001604975.1_Cebus_imitator-1.0/ vertebrate_mammalian]
|-
! 115
| notFound
| Homo_sapiens
| Human
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.27/ GCF_000001405.27_GRCh38.p1]
(471 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/all_assembly_versions/GCF_000001405.27_GRCh38.p1/ vertebrate_mammalian]
|-
! 116
| notFound
| Aotus_nancymaae
| Ma's night monkey
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000952055.1/ GCF_000952055.1_Anan_1.0]
(29223 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Aotus_nancymaae/all_assembly_versions/GCF_000952055.1_Anan_1.0/ vertebrate_mammalian]
|-
! 117
| notFound
| Macaca_nemestrina
| Pig-tailed macaque
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000956065.1/ GCF_000956065.1_Mnem_1.0]
(9733 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Macaca_nemestrina/all_assembly_versions/GCF_000956065.1_Mnem_1.0/ vertebrate_mammalian]
|-
! 118
| notFound
| Bos_taurus
| Cattle
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000003205.7/ GCF_000003205.7_Btau_5.0.1]
(3143 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Bos_taurus/all_assembly_versions/GCF_000003205.7_Btau_5.0.1/ vertebrate_mammalian]
|-
! 119
| notFound
| Cercocebus_atys
| Sooty mangabey
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000955945.1/ GCF_000955945.1_Caty_1.0]
(11433 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Cercocebus_atys/all_assembly_versions/GCF_000955945.1_Caty_1.0/ vertebrate_mammalian]
|-
! 120
| notFound
| Fukomys_damarensis
| Damara mole-rat
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000743615.1/ GCF_000743615.1_DMR_v1.0]
(74730 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Fukomys_damarensis/all_assembly_versions/GCF_000743615.1_DMR_v1.0/ vertebrate_mammalian]
|-
! 121
| notFound
| Marmota&nbsp;marmota&nbsp;marmota
| notFound
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001458135.1/ GCF_001458135.1_marMar2.1]
(0 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Marmota_marmota_marmota/all_assembly_versions/GCF_001458135.1_marMar2.1/ vertebrate_mammalian]
|-
! 122
| notFound
| Cricetulus_griseus
| Chinese hamster
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000223135.1/ GCF_000223135.1_CriGri_1.0]
(109152 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Cricetulus_griseus/all_assembly_versions/GCF_000223135.1_CriGri_1.0/ vertebrate_mammalian]
|-
! 123
| notFound
| Papio_anubis
| Olive baboon
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000264685.2/ GCF_000264685.2_Panu_2.0]
(63251 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Papio_anubis/all_assembly_versions/GCF_000264685.2_Panu_2.0/ vertebrate_mammalian]
|-
! 124
| notFound
| Odobenus&nbsp;rosmarus&nbsp;divergens
| notFound
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000321225.1/ GCF_000321225.1_Oros_1.0]
(0 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Odobenus_rosmarus_divergens/all_assembly_versions/GCF_000321225.1_Oros_1.0/ vertebrate_mammalian]
|-
! 125
| notFound
| Acinonyx_jubatus
| Cheetah
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001443585.1/ GCF_001443585.1_aciJub1]
(14383 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Acinonyx_jubatus/all_assembly_versions/GCF_001443585.1_aciJub1/ vertebrate_mammalian]
|-
! 126
| notFound
| Propithecus_coquereli
| Coquerel's sifaka
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000956105.1/ GCF_000956105.1_Pcoq_1.0]
(22539 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Propithecus_coquereli/all_assembly_versions/GCF_000956105.1_Pcoq_1.0/ vertebrate_mammalian]
|-
! 127
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=choHof1 choHof1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=choHof1 public]
| Choloepus&nbsp;hoffmanni
| Sloth
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000164785.1/ GCA_000164785.1_ChoHof1.0]
| vertebrate_mammalian
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Choloepus_hoffmanni/all_assembly_versions/GCA_000164785.1_ChoHof1.0/ GCA_000164785.1]
 
|-
! 128
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dipOrd1 dipOrd1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=dipOrd1 public]
| Dipodomys&nbsp;ordii
| Kangaroo rat
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000151885.1/ GCA_000151885.1_Dipord1.0]
| vertebrate_mammalian
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Dipodomys_ordii/all_assembly_versions/GCA_000151885.1_Dipord1.0/ GCA_000151885.1]
 
|-
! 129
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eidHel1 eidHel1]
| Eidolon&nbsp;helvum
| Straw colored fruit bat
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000465285.1/ GCA_000465285.1_ASM46528v1]
| vertebrate_mammalian
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Eidolon_helvum/all_assembly_versions/GCA_000465285.1_ASM46528v1/ GCA_000465285.1]
 
|-
! 130
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macEug2 macEug2]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=macEug2 public]
| Macropus&nbsp;eugenii
| Wallaby
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000004035.1/ GCA_000004035.1_Meug_1.1]
| vertebrate_mammalian
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Macropus_eugenii/all_assembly_versions/GCA_000004035.1_Meug_1.1/ GCA_000004035.1]
 
|-
! 131
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=megLyr1 megLyr1]
| Megaderma&nbsp;lyra
| Indian false vampire
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000465345.1/ GCA_000465345.1_ASM46534v1]
| vertebrate_mammalian
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Megaderma_lyra/all_assembly_versions/GCA_000465345.1_ASM46534v1/ GCA_000465345.1]
 
|-
! 132
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur1 micMur1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=micMur1 public]
| Microcebus&nbsp;murinus
| Mouse lemur
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000165445.1/ GCA_000165445.1_ASM16544v1]
| vertebrate_mammalian
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Microcebus_murinus/all_assembly_versions/GCA_000165445.1_ASM16544v1/ GCA_000165445.1]
 
|-
! 133
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri2 ochPri2]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=ochPri2 public]
| Ochotona&nbsp;princeps
| Pika
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000164825.1/ GCA_000164825.1_ASM16482v1]
| vertebrate_mammalian
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Ochotona_princeps/all_assembly_versions/GCA_000164825.1_ASM16482v1/ GCA_000164825.1]
 
|-
! 134
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=odoRosDiv1 odoRosDiv1]
| Odobenus&nbsp;rosmarus&nbsp;divergens
| Pacific walrus
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000321225.1/ GCA_000321225.1_Oros_1.0]
| vertebrate_mammalian
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Odobenus_rosmarus_divergens/all_assembly_versions/GCA_000321225.1_Oros_1.0/ GCA_000321225.1]
 
|-
! 135
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=proCap1 proCap1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=proCap1 public]
| Procavia&nbsp;capensis
| Rock hyrax
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000152225.1/ GCA_000152225.1_Procap1.0]
| vertebrate_mammalian
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Procavia_capensis/all_assembly_versions/GCA_000152225.1_Procap1.0/ GCA_000152225.1]
 
|-
! 136
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ptePar1 ptePar1]
| Pteronotus&nbsp;parnellii
| Parnell's mustached bat
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000465405.1/ GCA_000465405.1_ASM46540v1]
| vertebrate_mammalian
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Pteronotus_parnellii/all_assembly_versions/GCA_000465405.1_ASM46540v1/ GCA_000465405.1]
 
|-
! 137
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteVam1 pteVam1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=pteVam1 public]
| Pteropus&nbsp;vampyrus
| Megabat
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000151845.1/ GCA_000151845.1_Ptevap1.0]
| vertebrate_mammalian
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_mammalian/Pteropus_vampyrus/all_assembly_versions/GCA_000151845.1_Ptevap1.0/ GCA_000151845.1]
 
|-
! 138
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allMis1 allMis1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allMis1 allMis1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=allMis1 public]
| Alligator&nbsp;mississippiensis
| Alligator&nbsp;mississippiensis
| American alligator
| American alligator
Line 425: Line 1,273:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Alligator_mississippiensis/all_assembly_versions/GCF_000281125.1_allMis0.2/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Alligator_mississippiensis/all_assembly_versions/GCF_000281125.1_allMis0.2/ vertebrate_other]
|-
|-
! 59
! 139
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allSin1 allSin1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allSin1 allSin1]
| Alligator&nbsp;sinensis
| Alligator&nbsp;sinensis
Line 432: Line 1,280:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Alligator_sinensis/all_assembly_versions/GCF_000455745.1_ASM45574v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Alligator_sinensis/all_assembly_versions/GCF_000455745.1_ASM45574v1/ vertebrate_other]
|-
|-
! 60
! 140
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anaPla1 anaPla1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anaPla1 anaPla1]
| Anas&nbsp;platyrhynchos
| Anas&nbsp;platyrhynchos
Line 439: Line 1,287:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Anas_platyrhynchos/all_assembly_versions/GCF_000355885.1_BGI_duck_1.0/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Anas_platyrhynchos/all_assembly_versions/GCF_000355885.1_BGI_duck_1.0/ vertebrate_other]
|-
|-
! 61
! 141
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoCar2 anoCar2]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoCar2 anoCar2]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=anoCar2 public]
| Anolis&nbsp;carolinensis
| Anolis&nbsp;carolinensis
| Lizard
| Lizard
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000090745.1/ GCF_000090745.1_AnoCar2.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000090745.1/ GCF_000090745.1_AnoCar2.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000090745.2/ GCA_000090745.2_AnoCar2.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Anolis_carolinensis/all_assembly_versions/GCF_000090745.1_AnoCar2.0/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Anolis_carolinensis/all_assembly_versions/GCF_000090745.1_AnoCar2.0/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Anolis_carolinensis/all_assembly_versions/GCA_000090745.2_AnoCar2.0/ GCA_000090745.2]
|-
|-
! 62
! 142
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apaVit1 apaVit1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apaVit1 apaVit1]
| Apaloderma&nbsp;vittatum
| Apaloderma&nbsp;vittatum
| Bar tailed trogon
| Bar tailed trogon
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000703405.1/ GCF_000703405.1_ASM70340v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000703405.1/ GCF_000703405.1_ASM70340v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000703405.1/ GCA_000703405.1_ASM70340v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Apaloderma_vittatum/all_assembly_versions/GCF_000703405.1_ASM70340v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Apaloderma_vittatum/all_assembly_versions/GCF_000703405.1_ASM70340v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Apaloderma_vittatum/all_assembly_versions/GCA_000703405.1_ASM70340v1/ GCA_000703405.1]
|-
|-
! 63
! 143
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aptFor1 aptFor1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aptFor1 aptFor1]
| Aptenodytes&nbsp;forsteri
| Aptenodytes&nbsp;forsteri
| Emperor penguin
| Emperor penguin
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000699145.1/ GCF_000699145.1_ASM69914v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000699145.1/ GCF_000699145.1_ASM69914v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000699145.1/ GCA_000699145.1_ASM69914v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Aptenodytes_forsteri/all_assembly_versions/GCF_000699145.1_ASM69914v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Aptenodytes_forsteri/all_assembly_versions/GCF_000699145.1_ASM69914v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Aptenodytes_forsteri/all_assembly_versions/GCA_000699145.1_ASM69914v1/ GCA_000699145.1]
|-
|-
! 64
! 144
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bucRhi1 bucRhi1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bucRhi1 bucRhi1]
| Buceros&nbsp;rhinoceros&nbsp;silvestris<br>Buceros&nbsp;rhinoceros
| Buceros&nbsp;rhinoceros
| Rhinoceros hornbill
| Rhinoceros hornbill
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000710305.1/ GCF_000710305.1_ASM71030v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000710305.1/ GCF_000710305.1_ASM71030v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000710305.1/ GCA_000710305.1_ASM71030v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Buceros_rhinoceros/all_assembly_versions/GCF_000710305.1_ASM71030v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Buceros_rhinoceros/all_assembly_versions/GCF_000710305.1_ASM71030v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Buceros_rhinoceros/all_assembly_versions/GCA_000710305.1_ASM71030v1/ GCA_000710305.1]
|-
|-
! 65
! 145
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calAnn1 calAnn1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calAnn1 calAnn1]
| Calypte&nbsp;anna
| Calypte&nbsp;anna
| Anna's hummingbird
| Anna's hummingbird
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000699085.1/ GCF_000699085.1_ASM69908v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000699085.1/ GCF_000699085.1_ASM69908v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000699085.1/ GCA_000699085.1_ASM69908v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Calypte_anna/all_assembly_versions/GCF_000699085.1_ASM69908v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Calypte_anna/all_assembly_versions/GCF_000699085.1_ASM69908v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Calypte_anna/all_assembly_versions/GCA_000699085.1_ASM69908v1/ GCA_000699085.1]
|-
|-
! 66
! 146
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calMil1 calMil1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calMil1 calMil1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=calMil1 public]
| Callorhinchus&nbsp;milii
| Callorhinchus&nbsp;milii
| Elephant shark
| Elephant shark
Line 481: Line 1,346:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Callorhinchus_milii/all_assembly_versions/GCF_000165045.1_Callorhinchus_milii-6.1.3/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Callorhinchus_milii/all_assembly_versions/GCF_000165045.1_Callorhinchus_milii-6.1.3/ vertebrate_other]
|-
|-
! 67
! 147
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=capCar1 capCar1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=capCar1 capCar1]
| Caprimulgus&nbsp;carolinensis
| Caprimulgus&nbsp;carolinensis
| Chuck-will's-widow
| Chuck-will's-widow
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000700745.1/ GCF_000700745.1_ASM70074v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000700745.1/ GCF_000700745.1_ASM70074v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000700745.1/ GCA_000700745.1_ASM70074v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Caprimulgus_carolinensis/all_assembly_versions/GCF_000700745.1_ASM70074v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Caprimulgus_carolinensis/all_assembly_versions/GCF_000700745.1_ASM70074v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Caprimulgus_carolinensis/all_assembly_versions/GCA_000700745.1_ASM70074v1/ GCA_000700745.1]
|-
|-
! 68
! 148
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=carCri1 carCri1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=carCri1 carCri1]
| Cariama&nbsp;cristata
| Cariama&nbsp;cristata
| Red-legged seriema
| Red-legged seriema
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000690535.1/ GCF_000690535.1_ASM69053v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000690535.1/ GCF_000690535.1_ASM69053v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000690535.1/ GCA_000690535.1_ASM69053v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cariama_cristata/all_assembly_versions/GCF_000690535.1_ASM69053v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cariama_cristata/all_assembly_versions/GCF_000690535.1_ASM69053v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Cariama_cristata/all_assembly_versions/GCA_000690535.1_ASM69053v1/ GCA_000690535.1]
|-
|-
! 69
! 149
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chaVoc2 chaVoc2]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chaVoc2 chaVoc2]
| Charadrius&nbsp;vociferus
| Charadrius&nbsp;vociferus
| Killdeer
| Killdeer
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000708025.1/ GCF_000708025.1_ASM70802v2]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000708025.1/ GCF_000708025.1_ASM70802v2]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000708025.2/ GCA_000708025.2_ASM70802v2]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Charadrius_vociferus/all_assembly_versions/GCF_000708025.1_ASM70802v2/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Charadrius_vociferus/all_assembly_versions/GCF_000708025.1_ASM70802v2/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Charadrius_vociferus/all_assembly_versions/GCA_000708025.2_ASM70802v2/ GCA_000708025.2]
|-
|-
! 70
! 150
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cheMyd1 cheMyd1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cheMyd1 cheMyd1]
| Chelonia&nbsp;mydas
| Chelonia&nbsp;mydas
Line 509: Line 1,383:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Chelonia_mydas/all_assembly_versions/GCF_000344595.1_CheMyd_1.0/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Chelonia_mydas/all_assembly_versions/GCF_000344595.1_CheMyd_1.0/ vertebrate_other]
|-
|-
! 71
! 151
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlUnd1 chlUnd1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlUnd1 chlUnd1]
| Chlamydotis&nbsp;undulata&nbsp;macqueenii<br>Chlamydotis&nbsp;macqueenii
| Chlamydotis&nbsp;macqueenii
| Houbara bustard
| Houbara bustard
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000695195.1/ GCF_000695195.1_ASM69519v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000695195.1/ GCF_000695195.1_ASM69519v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000695195.1/ GCA_000695195.1_ASM69519v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Chlamydotis_macqueenii/all_assembly_versions/GCF_000695195.1_ASM69519v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Chlamydotis_macqueenii/all_assembly_versions/GCF_000695195.1_ASM69519v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Chlamydotis_macqueenii/all_assembly_versions/GCA_000695195.1_ASM69519v1/ GCA_000695195.1]
|-
|-
! 72
! 152
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colLiv1 colLiv1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colLiv1 colLiv1]
| Columba&nbsp;livia
| Columba&nbsp;livia
Line 523: Line 1,400:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Columba_livia/all_assembly_versions/GCF_000337935.1_Cliv_1.0/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Columba_livia/all_assembly_versions/GCF_000337935.1_Cliv_1.0/ vertebrate_other]
|-
|-
! 73
! 153
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colStr1 colStr1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colStr1 colStr1]
| Colius&nbsp;striatus
| Colius&nbsp;striatus
| Speckled mousebird
| Speckled mousebird
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000690715.1/ GCF_000690715.1_ASM69071v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000690715.1/ GCF_000690715.1_ASM69071v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000690715.1/ GCA_000690715.1_ASM69071v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Colius_striatus/all_assembly_versions/GCF_000690715.1_ASM69071v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Colius_striatus/all_assembly_versions/GCF_000690715.1_ASM69071v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Colius_striatus/all_assembly_versions/GCA_000690715.1_ASM69071v1/ GCA_000690715.1]
|-
|-
! 74
! 154
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corBra1 corBra1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corBra1 corBra1]
| Corvus&nbsp;brachyrhynchos
| Corvus&nbsp;brachyrhynchos
| American crow
| American crow
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000691975.1/ GCF_000691975.1_ASM69197v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000691975.1/ GCF_000691975.1_ASM69197v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000691975.1/ GCA_000691975.1_ASM69197v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Corvus_brachyrhynchos/all_assembly_versions/GCF_000691975.1_ASM69197v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Corvus_brachyrhynchos/all_assembly_versions/GCF_000691975.1_ASM69197v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Corvus_brachyrhynchos/all_assembly_versions/GCA_000691975.1_ASM69197v1/ GCA_000691975.1]
|-
|-
! 75
! 155
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cucCan1 cucCan1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cucCan1 cucCan1]
| Cuculus&nbsp;canorus
| Cuculus&nbsp;canorus
| Common cuckoo
| Common cuckoo
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000709325.1/ GCF_000709325.1_ASM70932v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000709325.1/ GCF_000709325.1_ASM70932v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000709325.1/ GCA_000709325.1_ASM70932v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cuculus_canorus/all_assembly_versions/GCF_000709325.1_ASM70932v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cuculus_canorus/all_assembly_versions/GCF_000709325.1_ASM70932v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Cuculus_canorus/all_assembly_versions/GCA_000709325.1_ASM70932v1/ GCA_000709325.1]
|-
|-
! 76
! 156
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cynSem1 cynSem1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cynSem1 cynSem1]
| Cynoglossus&nbsp;semilaevis
| Cynoglossus&nbsp;semilaevis
Line 551: Line 1,437:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cynoglossus_semilaevis/all_assembly_versions/GCF_000523025.1_Cse_v1.0/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cynoglossus_semilaevis/all_assembly_versions/GCF_000523025.1_Cse_v1.0/ vertebrate_other]
|-
|-
! 77
! 157
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer10 danRer10]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer10 danRer10]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer10 public]
| Danio&nbsp;rerio
| Danio&nbsp;rerio
| Zebrafish
| Zebrafish
Line 558: Line 1,445:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Danio_rerio/all_assembly_versions/GCF_000002035.5_GRCz10/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Danio_rerio/all_assembly_versions/GCF_000002035.5_GRCz10/ vertebrate_other]
|-
|-
! 78
! 158
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer7 danRer7]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer7 danRer7]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7 public]
| Danio&nbsp;rerio
| Danio&nbsp;rerio
| Zebrafish
| Zebrafish
Line 565: Line 1,453:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Danio_rerio/all_assembly_versions/GCF_000002035.4_Zv9/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Danio_rerio/all_assembly_versions/GCF_000002035.4_Zv9/ vertebrate_other]
|-
|-
! 79
! 159
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=egrGar1 egrGar1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=egrGar1 egrGar1]
| Egretta&nbsp;garzetta
| Egretta&nbsp;garzetta
Line 572: Line 1,460:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Egretta_garzetta/all_assembly_versions/GCF_000687185.1_ASM68718v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Egretta_garzetta/all_assembly_versions/GCF_000687185.1_ASM68718v1/ vertebrate_other]
|-
|-
! 80
! 160
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eurHel1 eurHel1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eurHel1 eurHel1]
| Eurypyga&nbsp;helias
| Eurypyga&nbsp;helias
| Sunbittern
| Sunbittern
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000690775.1/ GCF_000690775.1_ASM69077v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000690775.1/ GCF_000690775.1_ASM69077v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000690775.1/ GCA_000690775.1_ASM69077v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Eurypyga_helias/all_assembly_versions/GCF_000690775.1_ASM69077v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Eurypyga_helias/all_assembly_versions/GCF_000690775.1_ASM69077v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Eurypyga_helias/all_assembly_versions/GCA_000690775.1_ASM69077v1/ GCA_000690775.1]
|-
|-
! 81
! 161
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falChe1 falChe1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falChe1 falChe1]
| Falco&nbsp;cherrug
| Falco&nbsp;cherrug
| Saker falcon
| Saker falcon
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000337975.1/ GCF_000337975.1_F_cherrug_v1.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000337975.1/ GCF_000337975.1_F_cherrug_v1.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000337975.1/ GCA_000337975.1_F_cherrug_v1.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Falco_cherrug/all_assembly_versions/GCF_000337975.1_F_cherrug_v1.0/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Falco_cherrug/all_assembly_versions/GCF_000337975.1_F_cherrug_v1.0/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Falco_cherrug/all_assembly_versions/GCA_000337975.1_F_cherrug_v1.0/ GCA_000337975.1]
|-
|-
! 82
! 162
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falPer1 falPer1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falPer1 falPer1]
| Falco&nbsp;peregrinus
| Falco&nbsp;peregrinus
Line 593: Line 1,487:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Falco_peregrinus/all_assembly_versions/GCF_000337955.1_F_peregrinus_v1.0/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Falco_peregrinus/all_assembly_versions/GCF_000337955.1_F_peregrinus_v1.0/ vertebrate_other]
|-
|-
! 83
! 163
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ficAlb2 ficAlb2]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ficAlb2 ficAlb2]
| Ficedula&nbsp;albicollis
| Ficedula&nbsp;albicollis
| Collared flycatcher
| Collared flycatcher
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000247815.1/ GCF_000247815.1_FicAlb1.5]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000247815.1/ GCF_000247815.1_FicAlb1.5]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000247815.2/ GCA_000247815.2_FicAlb1.5]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Ficedula_albicollis/all_assembly_versions/GCF_000247815.1_FicAlb1.5/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Ficedula_albicollis/all_assembly_versions/GCF_000247815.1_FicAlb1.5/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Ficedula_albicollis/all_assembly_versions/GCA_000247815.2_FicAlb1.5/ GCA_000247815.2]
|-
|-
! 84
! 164
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr3 fr3]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr3 fr3]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=fr3 public]
| Takifugu&nbsp;rubripes
| Takifugu&nbsp;rubripes
| Fugu
| Fugu
Line 607: Line 1,505:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Takifugu_rubripes/all_assembly_versions/GCF_000180615.1_FUGU5/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Takifugu_rubripes/all_assembly_versions/GCF_000180615.1_FUGU5/ vertebrate_other]
|-
|-
! 85
! 165
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fulGla1 fulGla1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fulGla1 fulGla1]
| Fulmarus&nbsp;glacialis
| Fulmarus&nbsp;glacialis
| Northern fulmar
| Northern fulmar
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000690835.1/ GCF_000690835.1_ASM69083v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000690835.1/ GCF_000690835.1_ASM69083v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000690835.1/ GCA_000690835.1_ASM69083v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Fulmarus_glacialis/all_assembly_versions/GCF_000690835.1_ASM69083v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Fulmarus_glacialis/all_assembly_versions/GCF_000690835.1_ASM69083v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Fulmarus_glacialis/all_assembly_versions/GCA_000690835.1_ASM69083v1/ GCA_000690835.1]
|-
|-
! 86
! 166
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal4 galGal4]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal4 galGal4]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=galGal4 public]
| Gallus&nbsp;gallus
| Gallus&nbsp;gallus
| Chicken
| Chicken
Line 621: Line 1,523:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gallus_gallus/all_assembly_versions/GCF_000002315.3_Gallus_gallus-4.0/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gallus_gallus/all_assembly_versions/GCF_000002315.3_Gallus_gallus-4.0/ vertebrate_other]
|-
|-
! 87
! 167
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal5 galGal5]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal5 galGal5]
| Gallus&nbsp;gallus
| Gallus&nbsp;gallus
Line 628: Line 1,530:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gallus_gallus/all_assembly_versions/GCF_000002315.4_Gallus_gallus-5.0/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gallus_gallus/all_assembly_versions/GCF_000002315.4_Gallus_gallus-5.0/ vertebrate_other]
|-
|-
! 88
! 168
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gavSte1 gavSte1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gavSte1 gavSte1]
| Gavia&nbsp;stellata
| Gavia&nbsp;stellata
Line 635: Line 1,537:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gavia_stellata/all_assembly_versions/GCF_000690875.1_ASM69087v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gavia_stellata/all_assembly_versions/GCF_000690875.1_ASM69087v1/ vertebrate_other]
|-
|-
! 89
! 169
| gekJap0
| gekJap0
| Gekko&nbsp;japonicus
| Gekko_japonicus
| notFound
| Lizards
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_001447785.1/ GCF_001447785.1_Gekko_japonicus_V1.1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_001447785.1/ GCF_001447785.1_Gekko_japonicus_V1.1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gekko_japonicus/all_assembly_versions/GCF_001447785.1_Gekko_japonicus_V1.1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Gekko_japonicus/all_assembly_versions/GCF_001447785.1_Gekko_japonicus_V1.1/ vertebrate_other]
|-
|-
! 90
! 170
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=geoFor1 geoFor1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=geoFor1 geoFor1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=geoFor1 public]
| Geospiza&nbsp;fortis
| Geospiza&nbsp;fortis
| Medium ground finch
| Medium ground finch
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000277835.1/ GCF_000277835.1_GeoFor_1.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000277835.1/ GCF_000277835.1_GeoFor_1.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000277835.1/ GCA_000277835.1_GeoFor_1.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Geospiza_fortis/all_assembly_versions/GCF_000277835.1_GeoFor_1.0/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Geospiza_fortis/all_assembly_versions/GCF_000277835.1_GeoFor_1.0/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Geospiza_fortis/all_assembly_versions/GCA_000277835.1_GeoFor_1.0/ GCA_000277835.1]
|-
|-
! 91
! 171
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halAlb1 halAlb1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halAlb1 halAlb1]
| Haliaeetus&nbsp;albicilla
| Haliaeetus&nbsp;albicilla
| White-tailed eagle
| White-tailed eagle
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000691405.1/ GCF_000691405.1_ASM69140v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000691405.1/ GCF_000691405.1_ASM69140v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000691405.1/ GCA_000691405.1_ASM69140v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Haliaeetus_albicilla/all_assembly_versions/GCF_000691405.1_ASM69140v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Haliaeetus_albicilla/all_assembly_versions/GCF_000691405.1_ASM69140v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Haliaeetus_albicilla/all_assembly_versions/GCA_000691405.1_ASM69140v1/ GCA_000691405.1]
|-
|-
! 92
! 172
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halLeu1 halLeu1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halLeu1 halLeu1]
| Haliaeetus&nbsp;leucocephalus
| Haliaeetus&nbsp;leucocephalus
| Bald eagle
| Bald eagle
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000737465.1/ GCF_000737465.1_Haliaeetus_leucocephalus-4.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000737465.1/ GCF_000737465.1_Haliaeetus_leucocephalus-4.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000737465.1/ GCA_000737465.1_Haliaeetus_leucocephalus-4.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Haliaeetus_leucocephalus/all_assembly_versions/GCF_000737465.1_Haliaeetus_leucocephalus-4.0/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Haliaeetus_leucocephalus/all_assembly_versions/GCF_000737465.1_Haliaeetus_leucocephalus-4.0/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Haliaeetus_leucocephalus/all_assembly_versions/GCA_000737465.1_Haliaeetus_leucocephalus-4.0/ GCA_000737465.1]
|-
|-
! 93
! 173
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=latCha1 latCha1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=latCha1 latCha1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=latCha1 public]
| Latimeria&nbsp;chalumnae
| Latimeria&nbsp;chalumnae
| Coelacanth
| Coelacanth
Line 670: Line 1,583:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Latimeria_chalumnae/all_assembly_versions/GCF_000225785.1_LatCha1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Latimeria_chalumnae/all_assembly_versions/GCF_000225785.1_LatCha1/ vertebrate_other]
|-
|-
! 94
! 174
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepDis1 lepDis1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepDis1 lepDis1]
| Leptosomus&nbsp;discolor
| Leptosomus&nbsp;discolor
| Cuckoo roller
| Cuckoo roller
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000691785.1/ GCF_000691785.1_ASM69178v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000691785.1/ GCF_000691785.1_ASM69178v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000691785.1/ GCA_000691785.1_ASM69178v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Leptosomus_discolor/all_assembly_versions/GCF_000691785.1_ASM69178v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Leptosomus_discolor/all_assembly_versions/GCF_000691785.1_ASM69178v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Leptosomus_discolor/all_assembly_versions/GCA_000691785.1_ASM69178v1/ GCA_000691785.1]
|-
|-
! 95
! 175
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mayZeb1 mayZeb1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mayZeb1 mayZeb1]
| Maylandia&nbsp;zebra
| Maylandia&nbsp;zebra
| Zebra mbuna
| Zebra mbuna
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000238955.1/ GCF_000238955.1_MetZeb1.1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000238955.1/ GCF_000238955.1_MetZeb1.1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000238955.2/ GCA_000238955.2_MetZeb1.1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Maylandia_zebra/all_assembly_versions/GCF_000238955.1_MetZeb1.1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Maylandia_zebra/all_assembly_versions/GCF_000238955.1_MetZeb1.1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Maylandia_zebra/all_assembly_versions/GCA_000238955.2_MetZeb1.1/ GCA_000238955.2]
|-
|-
! 96
! 176
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melUnd1 melUnd1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melUnd1 melUnd1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=melUnd1 public]
| Melopsittacus&nbsp;undulatus
| Melopsittacus&nbsp;undulatus
| Budgerigar
| Budgerigar
Line 691: Line 1,611:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Melopsittacus_undulatus/all_assembly_versions/GCF_000238935.1_Melopsittacus_undulatus_6.3/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Melopsittacus_undulatus/all_assembly_versions/GCF_000238935.1_Melopsittacus_undulatus_6.3/ vertebrate_other]
|-
|-
! 97
! 177
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=merNub1 merNub1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=merNub1 merNub1]
| Merops&nbsp;nubicus
| Merops&nbsp;nubicus
| Northern carmine bee-eater
| Northern carmine bee-eater
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000691845.1/ GCF_000691845.1_ASM69184v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000691845.1/ GCF_000691845.1_ASM69184v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000691845.1/ GCA_000691845.1_ASM69184v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Merops_nubicus/all_assembly_versions/GCF_000691845.1_ASM69184v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Merops_nubicus/all_assembly_versions/GCF_000691845.1_ASM69184v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Merops_nubicus/all_assembly_versions/GCA_000691845.1_ASM69184v1/ GCA_000691845.1]
|-
|-
! 98
! 178
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesUni1 mesUni1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesUni1 mesUni1]
| Mesitornis&nbsp;unicolor
| Mesitornis&nbsp;unicolor
| Brown roatelo
| Brown roatelo
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000695765.1/ GCF_000695765.1_ASM69576v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000695765.1/ GCF_000695765.1_ASM69576v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000695765.1/ GCA_000695765.1_ASM69576v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Mesitornis_unicolor/all_assembly_versions/GCF_000695765.1_ASM69576v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Mesitornis_unicolor/all_assembly_versions/GCF_000695765.1_ASM69576v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Mesitornis_unicolor/all_assembly_versions/GCA_000695765.1_ASM69576v1/ GCA_000695765.1]
|-
|-
! 99
! 179
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nipNip1 nipNip1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nipNip1 nipNip1]
| Nipponia&nbsp;nippon
| Nipponia&nbsp;nippon
Line 712: Line 1,638:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Nipponia_nippon/all_assembly_versions/GCF_000708225.1_ASM70822v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Nipponia_nippon/all_assembly_versions/GCF_000708225.1_ASM70822v1/ vertebrate_other]
|-
|-
! 100
! 180
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=notCor1 notCor1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=notCor1 notCor1]
| Notothenia&nbsp;coriiceps
| Notothenia&nbsp;coriiceps
Line 719: Line 1,645:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Notothenia_coriiceps/all_assembly_versions/GCF_000735185.1_NC01/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Notothenia_coriiceps/all_assembly_versions/GCF_000735185.1_NC01/ vertebrate_other]
|-
|-
! 101
! 181
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=opiHoa1 opiHoa1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=opiHoa1 opiHoa1]
| Opisthocomus&nbsp;hoazin
| Opisthocomus&nbsp;hoazin
| Hoatzin
| Hoatzin
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000692075.1/ GCF_000692075.1_ASM69207v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000692075.1/ GCF_000692075.1_ASM69207v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000692075.1/ GCA_000692075.1_ASM69207v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Opisthocomus_hoazin/all_assembly_versions/GCF_000692075.1_ASM69207v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Opisthocomus_hoazin/all_assembly_versions/GCF_000692075.1_ASM69207v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Opisthocomus_hoazin/all_assembly_versions/GCA_000692075.1_ASM69207v1/ GCA_000692075.1]
|-
|-
! 102
! 182
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oreNil2 oreNil2]
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oreNil2 oreNil2]
(has dups: 170)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=oreNil2 public]
| Oreochromis&nbsp;niloticus
| Oreochromis&nbsp;niloticus
| Nile tilapia
| Nile tilapia
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000188235.2/ GCF_000188235.2_Orenil1.1]
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000188235.2/ GCF_000188235.2_Orenil1.1]
(has dups: 170)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Oreochromis_niloticus/all_assembly_versions/GCF_000188235.2_Orenil1.1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Oreochromis_niloticus/all_assembly_versions/GCF_000188235.2_Orenil1.1/ vertebrate_other]
|-
|-
! 103
! 183
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelCri1 pelCri1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelCri1 pelCri1]
| Pelecanus&nbsp;crispus
| Pelecanus&nbsp;crispus
| Dalmatian pelican
| Dalmatian pelican
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000687375.1/ GCF_000687375.1_ASM68737v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000687375.1/ GCF_000687375.1_ASM68737v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000687375.1/ GCA_000687375.1_ASM68737v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pelecanus_crispus/all_assembly_versions/GCF_000687375.1_ASM68737v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pelecanus_crispus/all_assembly_versions/GCF_000687375.1_ASM68737v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Pelecanus_crispus/all_assembly_versions/GCA_000687375.1_ASM68737v1/ GCA_000687375.1]
|-
|-
! 104
! 184
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelSin1 pelSin1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelSin1 pelSin1]
| Pelodiscus&nbsp;sinensis
| Pelodiscus&nbsp;sinensis
Line 747: Line 1,682:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pelodiscus_sinensis/all_assembly_versions/GCF_000230535.1_PelSin_1.0/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pelodiscus_sinensis/all_assembly_versions/GCF_000230535.1_PelSin_1.0/ vertebrate_other]
|-
|-
! 105
! 185
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaCar1 phaCar1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaCar1 phaCar1]
| Phalacrocorax&nbsp;carbo
| Phalacrocorax&nbsp;carbo
| Great cormorant
| Great cormorant
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000708925.1/ GCF_000708925.1_ASM70892v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000708925.1/ GCF_000708925.1_ASM70892v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000708925.1/ GCA_000708925.1_ASM70892v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Phalacrocorax_carbo/all_assembly_versions/GCF_000708925.1_ASM70892v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Phalacrocorax_carbo/all_assembly_versions/GCF_000708925.1_ASM70892v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Phalacrocorax_carbo/all_assembly_versions/GCA_000708925.1_ASM70892v1/ GCA_000708925.1]
|-
|-
! 106
! 186
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaLep1 phaLep1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaLep1 phaLep1]
| Phaethon&nbsp;lepturus
| Phaethon&nbsp;lepturus
| White-tailed tropicbird
| White-tailed tropicbird
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000687285.1/ GCF_000687285.1_ASM68728v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000687285.1/ GCF_000687285.1_ASM68728v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000687285.1/ GCA_000687285.1_ASM68728v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Phaethon_lepturus/all_assembly_versions/GCF_000687285.1_ASM68728v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Phaethon_lepturus/all_assembly_versions/GCF_000687285.1_ASM68728v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Phaethon_lepturus/all_assembly_versions/GCA_000687285.1_ASM68728v1/ GCA_000687285.1]
|-
|-
! 107
! 187
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=picPub1 picPub1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=picPub1 picPub1]
| Picoides&nbsp;pubescens
| Picoides&nbsp;pubescens
| Downy woodpecker
| Downy woodpecker
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000699005.1/ GCF_000699005.1_ASM69900v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000699005.1/ GCF_000699005.1_ASM69900v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000699005.1/ GCA_000699005.1_ASM69900v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Picoides_pubescens/all_assembly_versions/GCF_000699005.1_ASM69900v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Picoides_pubescens/all_assembly_versions/GCF_000699005.1_ASM69900v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Picoides_pubescens/all_assembly_versions/GCA_000699005.1_ASM69900v1/ GCA_000699005.1]
|-
|-
! 108
! 188
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeFor1 poeFor1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeFor1 poeFor1]
| Poecilia&nbsp;formosa
| Poecilia&nbsp;formosa
| Amazon molly
| Amazon molly
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000485575.1/ GCF_000485575.1_Poecilia_formosa-5.1.2]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000485575.1/ GCF_000485575.1_Poecilia_formosa-5.1.2]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000485575.1/ GCA_000485575.1_Poecilia_formosa-5.1.2]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Poecilia_formosa/all_assembly_versions/GCF_000485575.1_Poecilia_formosa-5.1.2/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Poecilia_formosa/all_assembly_versions/GCF_000485575.1_Poecilia_formosa-5.1.2/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Poecilia_formosa/all_assembly_versions/GCA_000485575.1_Poecilia_formosa-5.1.2/ GCA_000485575.1]
|-
|-
! 109
! 189
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pseHum1 pseHum1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pseHum1 pseHum1]
| Pseudopodoces&nbsp;humilis
| Pseudopodoces&nbsp;humilis
Line 782: Line 1,729:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pseudopodoces_humilis/all_assembly_versions/GCF_000331425.1_PseHum1.0/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pseudopodoces_humilis/all_assembly_versions/GCF_000331425.1_PseHum1.0/ vertebrate_other]
|-
|-
! 110
! 190
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteGut1 pteGut1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteGut1 pteGut1]
| Pterocles&nbsp;gutturalis
| Pterocles&nbsp;gutturalis
| Yellow-throated sandgrouse
| Yellow-throated sandgrouse
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000699245.1/ GCF_000699245.1_ASM69924v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000699245.1/ GCF_000699245.1_ASM69924v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000699245.1/ GCA_000699245.1_ASM69924v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pterocles_gutturalis/all_assembly_versions/GCF_000699245.1_ASM69924v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pterocles_gutturalis/all_assembly_versions/GCF_000699245.1_ASM69924v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Pterocles_gutturalis/all_assembly_versions/GCA_000699245.1_ASM69924v1/ GCA_000699245.1]
|-
|-
! 111
! 191
| pytBiv0
| pytBiv0
| Python&nbsp;bivittatus
| Python_bivittatus
| notFound
| Burmese python
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000186305.1/ GCF_000186305.1_Python_molurus_bivittatus-5.0.2]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000186305.1/ GCF_000186305.1_Python_molurus_bivittatus-5.0.2]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Python_bivittatus/all_assembly_versions/GCF_000186305.1_Python_molurus_bivittatus-5.0.2/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Python_bivittatus/all_assembly_versions/GCF_000186305.1_Python_molurus_bivittatus-5.0.2/ vertebrate_other]
|-
|-
! 112
! 192
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pytBiv1 pytBiv1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pytBiv1 pytBiv1]
| Python&nbsp;bivittatus
| Python&nbsp;bivittatus
Line 803: Line 1,753:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Python_bivittatus/all_assembly_versions/GCF_000186305.1_Python_molurus_bivittatus-5.0.2/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Python_bivittatus/all_assembly_versions/GCF_000186305.1_Python_molurus_bivittatus-5.0.2/ vertebrate_other]
|-
|-
! 113
! 193
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strCam1 strCam1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strCam1 strCam1]
| Struthio&nbsp;camelus&nbsp;australis<br>Struthio&nbsp;camelus
| Struthio&nbsp;camelus
| Ostrich
| Ostrich
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000698965.1/ GCF_000698965.1_ASM69896v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000698965.1/ GCF_000698965.1_ASM69896v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Struthio_camelus/all_assembly_versions/GCF_000698965.1_ASM69896v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Struthio_camelus/all_assembly_versions/GCF_000698965.1_ASM69896v1/ vertebrate_other]
|-
|-
! 114
! 194
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut2 taeGut2]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut2 taeGut2]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=taeGut2 public]
| Taeniopygia&nbsp;guttata
| Taeniopygia&nbsp;guttata
| Zebra finch
| Zebra finch
Line 817: Line 1,768:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Taeniopygia_guttata/all_assembly_versions/GCF_000151805.1_Taeniopygia_guttata-3.2.4/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Taeniopygia_guttata/all_assembly_versions/GCF_000151805.1_Taeniopygia_guttata-3.2.4/ vertebrate_other]
|-
|-
! 115
! 195
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tauEry1 tauEry1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tauEry1 tauEry1]
| Tauraco&nbsp;erythrolophus
| Tauraco&nbsp;erythrolophus
| Red crested turaco
| Red crested turaco
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000709365.1/ GCF_000709365.1_ASM70936v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000709365.1/ GCF_000709365.1_ASM70936v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000709365.1/ GCA_000709365.1_ASM70936v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tauraco_erythrolophus/all_assembly_versions/GCF_000709365.1_ASM70936v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tauraco_erythrolophus/all_assembly_versions/GCF_000709365.1_ASM70936v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Tauraco_erythrolophus/all_assembly_versions/GCA_000709365.1_ASM70936v1/ GCA_000709365.1]
|-
|-
! 116
! 196
| thaSir0
| thaSir0
| Thamnophis&nbsp;sirtalis
| Thamnophis_sirtalis
| notFound
| Snakes
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_001077635.1/ GCF_001077635.1_Thamnophis_sirtalis-6.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_001077635.1/ GCF_001077635.1_Thamnophis_sirtalis-6.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_001077635.2/ GCA_001077635.2_Thamnophis_sirtalis-6.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Thamnophis_sirtalis/all_assembly_versions/GCF_001077635.1_Thamnophis_sirtalis-6.0/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Thamnophis_sirtalis/all_assembly_versions/GCF_001077635.1_Thamnophis_sirtalis-6.0/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Thamnophis_sirtalis/all_assembly_versions/GCA_001077635.2_Thamnophis_sirtalis-6.0/ GCA_001077635.2]
|-
|-
! 117
! 197
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tinGut2 tinGut2]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tinGut2 tinGut2]
| Tinamus&nbsp;guttatus
| Tinamus&nbsp;guttatus
| White throated tinamou
| White throated tinamou
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000705375.1/ GCF_000705375.1_ASM70537v2]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000705375.1/ GCF_000705375.1_ASM70537v2]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000705375.2/ GCA_000705375.2_ASM70537v2]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tinamus_guttatus/all_assembly_versions/GCF_000705375.1_ASM70537v2/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tinamus_guttatus/all_assembly_versions/GCF_000705375.1_ASM70537v2/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Tinamus_guttatus/all_assembly_versions/GCA_000705375.2_ASM70537v2/ GCA_000705375.2]
|-
|-
! 118
! 198
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tytAlb1 tytAlb1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tytAlb1 tytAlb1]
| Tyto&nbsp;alba
| Tyto&nbsp;alba
| Barn owl
| Barn owl
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000687205.1/ GCF_000687205.1_ASM68720v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000687205.1/ GCF_000687205.1_ASM68720v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000687205.1/ GCA_000687205.1_ASM68720v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tyto_alba/all_assembly_versions/GCF_000687205.1_ASM68720v1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Tyto_alba/all_assembly_versions/GCF_000687205.1_ASM68720v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Tyto_alba/all_assembly_versions/GCA_000687205.1_ASM68720v1/ GCA_000687205.1]
|-
|-
! 119
! 199
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 xenTro7]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 xenTro7]
| Xenopus&nbsp;tropicalis<br>Xenopus&nbsp;Silurana&nbsp;tropicalis
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 public]
| Xenopus&nbsp;Silurana&nbsp;tropicalis
| X. tropicalis
| X. tropicalis
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000004195.2/ GCF_000004195.2_Xtropicalis_v7]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000004195.2/ GCF_000004195.2_Xtropicalis_v7]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xenopus_Silurana_tropicalis/all_assembly_versions/GCF_000004195.2_Xtropicalis_v7/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xenopus_Silurana_tropicalis/all_assembly_versions/GCF_000004195.2_Xtropicalis_v7/ vertebrate_other]
|-
|-
! 120
! 200
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 xenTro7]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 xenTro7]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 public]
| Xenopus&nbsp;tropicalis
| Xenopus&nbsp;tropicalis
| X. tropicalis
| X. tropicalis
Line 859: Line 1,824:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xenopus_tropicalis/all_assembly_versions/GCF_000004195.2_Xtropicalis_v7/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xenopus_tropicalis/all_assembly_versions/GCF_000004195.2_Xtropicalis_v7/ vertebrate_other]
|-
|-
! 121
! 201
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xipMac1 xipMac1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xipMac1 xipMac1]
| Xiphophorus&nbsp;maculatus
| Xiphophorus&nbsp;maculatus
Line 866: Line 1,831:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xiphophorus_maculatus/all_assembly_versions/GCF_000241075.1_Xiphophorus_maculatus-4.4.2/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Xiphophorus_maculatus/all_assembly_versions/GCF_000241075.1_Xiphophorus_maculatus-4.4.2/ vertebrate_other]
|-
|-
! 122
! 202
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zonAlb1 zonAlb1]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zonAlb1 zonAlb1]
| Zonotrichia&nbsp;albicollis
| Zonotrichia&nbsp;albicollis
| White-throated sparrow
| White-throated sparrow
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000385455.1/ GCF_000385455.1_Zonotrichia_albicollis-1.0.1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000385455.1/ GCF_000385455.1_Zonotrichia_albicollis-1.0.1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000385455.1/ GCA_000385455.1_Zonotrichia_albicollis-1.0.1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Zonotrichia_albicollis/all_assembly_versions/GCF_000385455.1_Zonotrichia_albicollis-1.0.1/ vertebrate_other]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Zonotrichia_albicollis/all_assembly_versions/GCF_000385455.1_Zonotrichia_albicollis-1.0.1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Zonotrichia_albicollis/all_assembly_versions/GCA_000385455.1_Zonotrichia_albicollis-1.0.1/ GCA_000385455.1]
|-
! 203
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=punNye1 punNye1]
(subset: 7233 of 7233)
| Pundamilia&nbsp;nyererei
| Pundamilia nyererei
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000239375.1/ GCF_000239375.1_PunNye1.0]
(has dups: 3)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pundamilia_nyererei/all_assembly_versions/GCF_000239375.1_PunNye1.0/ vertebrate_other]
|-
! 204
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=neoBri1 neoBri1]
(subset: 9083 of 9083)
| Neolamprologus&nbsp;brichardi
| Princess of Burundi
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000239395.1/ GCF_000239395.1_NeoBri1.0]
(has dups: 16)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Neolamprologus_brichardi/all_assembly_versions/GCF_000239395.1_NeoBri1.0/ vertebrate_other]
|-
! 205
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hapBur1 hapBur1]
(subset: 7994 of 7994)
| Haplochromis&nbsp;burtoni
| Burton's mouthbreeder
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000239415.1/ GCF_000239415.1_AstBur1.0]
(has dups: 7)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Haplochromis_burtoni/all_assembly_versions/GCF_000239415.1_AstBur1.0/ vertebrate_other]
|-
! 206
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepOcu1 lepOcu1]
(subset: 1925 of 1925)
| Lepisosteus&nbsp;oculatus
| Spotted gar
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000242695.1/ GCF_000242695.1_LepOcu1]
(has dups: 1)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Lepisosteus_oculatus/all_assembly_versions/GCF_000242695.1_LepOcu1/ vertebrate_other]
|-
! 207
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=serCan1 serCan1]
(subset: 304397 of 304397)
| Serinus&nbsp;canaria
| Canary
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000534875.1/ GCF_000534875.1_SCA1]
(has dups: 3)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Serinus_canaria/all_assembly_versions/GCF_000534875.1_SCA1/ vertebrate_other]
|-
! 208
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=stePar1 stePar1]
(subset: 5817 of 5817)
| Stegastes&nbsp;partitus
| Bicolor damselfish
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000690725.1/ GCF_000690725.1_Stegastes_partitus-1.0.2]
(has dups: 1)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Stegastes_partitus/all_assembly_versions/GCF_000690725.1_Stegastes_partitus-1.0.2/ vertebrate_other]
|-
! 209
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pygAde1 pygAde1]
(subset: 19264 of 19265)
| Pygoscelis&nbsp;adeliae
| Adelie penguin
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000699105.1/ GCF_000699105.1_ASM69910v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000699105.1/ GCA_000699105.1_ASM69910v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Pygoscelis_adeliae/all_assembly_versions/GCF_000699105.1_ASM69910v1/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Pygoscelis_adeliae/all_assembly_versions/GCA_000699105.1_ASM69910v1/ GCA_000699105.1]
|-
! 210
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=esoLuc1 esoLuc1]
(subset: 5325 of 5326)
| Esox&nbsp;lucius
| Northern pike
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000721915.1/ GCF_000721915.1_EsoLuc1.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000721915.1/ GCA_000721915.1_EsoLuc1.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Esox_lucius/all_assembly_versions/GCF_000721915.1_EsoLuc1.0/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Esox_lucius/all_assembly_versions/GCA_000721915.1_EsoLuc1.0/ GCA_000721915.1]
|-
! 211
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cypVar1 cypVar1]
(subset: 9258 of 9259)
| Cyprinodon&nbsp;variegatus
| Sheepshead minnow
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000732505.1/ GCF_000732505.1_C_variegatus-1.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000732505.1/ GCA_000732505.1_C_variegatus-1.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Cyprinodon_variegatus/all_assembly_versions/GCF_000732505.1_C_variegatus-1.0/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Cyprinodon_variegatus/all_assembly_versions/GCA_000732505.1_C_variegatus-1.0/ GCA_000732505.1]
|-
! 212
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corCor1 corCor1]
(subset: 1298 of 1299)
| Corvus&nbsp;cornix
| Hooded crow
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000738735.1/ GCF_000738735.1_Hooded_Crow_genome]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Corvus_cornix/all_assembly_versions/GCF_000738735.1_Hooded_Crow_genome/ vertebrate_other]
|-
! 213
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aquChr2 aquChr2]
(subset: 1141 of 1142)
| Aquila&nbsp;chrysaetos
| Golden eagle
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000766835.1/ GCF_000766835.1_Aquila_chrysaetos-1.0.2]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000766835.1/ GCA_000766835.1_Aquila_chrysaetos-1.0.2]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Aquila_chrysaetos/all_assembly_versions/GCF_000766835.1_Aquila_chrysaetos-1.0.2/ vertebrate_other]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Aquila_chrysaetos/all_assembly_versions/GCA_000766835.1_Aquila_chrysaetos-1.0.2/ GCA_000766835.1]
|-
! 214
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=astMex1 astMex1]
| Astyanax&nbsp;mexicanus
| Mexican tetra (cavefish)
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000372685.1/ GCF_000372685.1_Astyanax_mexicanus-1.0.2]
(subset: 10735 of 10736)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Astyanax_mexicanus/all_assembly_versions/GCF_000372685.1_Astyanax_mexicanus-1.0.2/ vertebrate_other]
|-
! 215
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=manVit1 manVit1]
| Manacus&nbsp;vitellinus
| Golden-collared manakin
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000692015.1/ GCF_000692015.1_ASM69201v2]
(subset: 92755 of 92789)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Manacus_vitellinus/all_assembly_versions/GCF_000692015.1_ASM69201v2/ vertebrate_other]
|-
! 216
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=acaChl1 acaChl1]
| Acanthisitta&nbsp;chloris
| Rifleman
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000695815.1/ GCF_000695815.1_ASM69581v1]
(subset: 53875 of 53876)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Acanthisitta_chloris/all_assembly_versions/GCF_000695815.1_ASM69581v1/ vertebrate_other]
|-
! 217
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melGal1 melGal1]
(near match: 5890 of 5891)
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=melGal1 public]
| Meleagris&nbsp;gallopavo
| Turkey
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000146605.1/ GCF_000146605.1_Turkey_2.01]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Meleagris_gallopavo/all_assembly_versions/GCF_000146605.1_Turkey_2.01/ vertebrate_other]
|-
! 218
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrPic2 chrPic2]
(near match: 78594 of 78595)
| Chrysemys&nbsp;picta
| Painted turtle
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000241765.3/ GCF_000241765.3_Chrysemys_picta_bellii-3.0.3]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Chrysemys_picta/all_assembly_versions/GCF_000241765.3_Chrysemys_picta_bellii-3.0.3/ vertebrate_other]
|-
! 219
| style="color:green;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeRet1 poeRet1]
(near match: 2766 of 2767)
| Poecilia&nbsp;reticulata
| Guppy
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000633615.1/ GCF_000633615.1_Guppy_female_1.0_MT]
(has dups: 1)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Poecilia_reticulata/all_assembly_versions/GCF_000633615.1_Guppy_female_1.0_MT/ vertebrate_other]
|-
! 220
| notFound
| Larimichthys_crocea
| Large yellow croaker
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000742935.1/ GCF_000742935.1_ASM74293v1]
(10266 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Larimichthys_crocea/all_assembly_versions/GCF_000742935.1_ASM74293v1/ vertebrate_other]
|-
! 221
| notFound
| Poecilia_mexicana
| Shortfin molly
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001443325.1/ GCF_001443325.1_P_mexicana-1.0]
(has dups: 3)
(18105 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Poecilia_mexicana/all_assembly_versions/GCF_001443325.1_P_mexicana-1.0/ vertebrate_other]
|-
! 222
| notFound
| Esox_lucius
| Northern pike
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000721915.2/ GCF_000721915.2_ASM72191v2]
(1520 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Esox_lucius/all_assembly_versions/GCF_000721915.2_ASM72191v2/ vertebrate_other]
|-
! 223
| notFound
| Calidris_pugnax
| Ruff
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001431845.1/ GCF_001431845.1_ASM143184v1]
(3753 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Calidris_pugnax/all_assembly_versions/GCF_001431845.1_ASM143184v1/ vertebrate_other]
|-
! 224
| notFound
| Anser&nbsp;cygnoides&nbsp;domesticus
| notFound
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000971095.1/ GCF_000971095.1_AnsCyg_PRJNA183603_v1.0]
(0 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Anser_cygnoides_domesticus/all_assembly_versions/GCF_000971095.1_AnsCyg_PRJNA183603_v1.0/ vertebrate_other]
|-
! 225
| notFound
| Poecilia_latipinna
| Sailfin molly
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001443285.1/ GCF_001443285.1_P_latipinna-1.0]
(has dups: 2)
(17988 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Poecilia_latipinna/all_assembly_versions/GCF_001443285.1_P_latipinna-1.0/ vertebrate_other]
|-
! 226
| notFound
| Sinocyclocheilus_rhinocerous
| Bony fishes
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001515625.1/ GCF_001515625.1_SAMN03320098_v1.1]
(has dups: 1)
(164173 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Sinocyclocheilus_rhinocerous/all_assembly_versions/GCF_001515625.1_SAMN03320098_v1.1/ vertebrate_other]
|-
! 227
| notFound
| Oryzias_latipes
| Japanese medaka
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000313675.1/ GCF_000313675.1_ASM31367v1]
(7189 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Oryzias_latipes/all_assembly_versions/GCF_000313675.1_ASM31367v1/ vertebrate_other]
|-
! 228
| notFound
| Ictalurus_punctatus
| Channel catfish
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001660625.1/ GCF_001660625.1_IpCoco_1.2]
(9341 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Ictalurus_punctatus/all_assembly_versions/GCF_001660625.1_IpCoco_1.2/ vertebrate_other]
|-
! 229
| notFound
| Salmo_salar
| Atlantic salmon
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000233375.1/ GCF_000233375.1_ICSASG_v2]
(has dups: 3)
(232155 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Salmo_salar/all_assembly_versions/GCF_000233375.1_ICSASG_v2/ vertebrate_other]
|-
! 230
| notFound
| Austrofundulus_limnaeus
| Bony fishes
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001266775.1/ GCF_001266775.1_Austrofundulus_limnaeus-1.0]
(has dups: 1)
(29785 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Austrofundulus_limnaeus/all_assembly_versions/GCF_001266775.1_Austrofundulus_limnaeus-1.0/ vertebrate_other]
|-
! 231
| notFound
| Nothobranchius_furzeri
| Turquoise killifish
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001465895.1/ GCF_001465895.1_Nfu_20140520]
(5897 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Nothobranchius_furzeri/all_assembly_versions/GCF_001465895.1_Nfu_20140520/ vertebrate_other]
|-
|-
! 123
! 232
| notFound
| Kryptolebias_marmoratus
| Mangrove rivulus
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001649575.1/ GCF_001649575.1_ASM164957v1]
(3073 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Kryptolebias_marmoratus/all_assembly_versions/GCF_001649575.1_ASM164957v1/ vertebrate_other]
|-
! 233
| notFound
| Sturnus_vulgaris
| Common starling
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001447265.1/ GCF_001447265.1_Sturnus_vulgaris-1.0]
(2361 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Sturnus_vulgaris/all_assembly_versions/GCF_001447265.1_Sturnus_vulgaris-1.0/ vertebrate_other]
|-
! 234
| notFound
| Maylandia_zebra
| Zebra mbuna
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000238955.2/ GCF_000238955.2_M_zebra_UMD1]
(3555 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Maylandia_zebra/all_assembly_versions/GCF_000238955.2_M_zebra_UMD1/ vertebrate_other]
|-
! 235
| notFound
| Chaetura_pelagica
| Chimney swift
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000747805.1/ GCF_000747805.1_ChaPel_1.0]
(19072 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Chaetura_pelagica/all_assembly_versions/GCF_000747805.1_ChaPel_1.0/ vertebrate_other]
|-
! 236
| notFound
| Coturnix_japonica
| Japanese quail
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001577835.1/ GCF_001577835.1_Coturnix_japonica_2.0]
(2012 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Coturnix_japonica/all_assembly_versions/GCF_001577835.1_Coturnix_japonica_2.0/ vertebrate_other]
|-
! 237
| notFound
| Balearica&nbsp;regulorum&nbsp;gibbericeps
| notFound
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000709895.1/ GCF_000709895.1_ASM70989v1]
(0 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Balearica_regulorum_gibbericeps/all_assembly_versions/GCF_000709895.1_ASM70989v1/ vertebrate_other]
|-
! 238
| notFound
| Parus_major
| Great Tit
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001522545.1/ GCF_001522545.1_Parus_major1.0.3]
(1676 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Parus_major/all_assembly_versions/GCF_001522545.1_Parus_major1.0.3/ vertebrate_other]
|-
! 239
| notFound
| Fundulus_heteroclitus
| Mummichog
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000826765.1/ GCF_000826765.1_Fundulus_heteroclitus-3.0.2]
(10180 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Fundulus_heteroclitus/all_assembly_versions/GCF_000826765.1_Fundulus_heteroclitus-3.0.2/ vertebrate_other]
|-
! 240
| notFound
| Sinocyclocheilus_grahami
| Bony fishes
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001515645.1/ GCF_001515645.1_SAMN03320097.WGS_v1.1]
(31277 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Sinocyclocheilus_grahami/all_assembly_versions/GCF_001515645.1_SAMN03320097.WGS_v1.1/ vertebrate_other]
|-
! 241
| notFound
| Protobothrops_mucrosquamatus
| Snakes
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001527695.1/ GCF_001527695.1_P.Mucros_1.0]
(52281 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Protobothrops_mucrosquamatus/all_assembly_versions/GCF_001527695.1_P.Mucros_1.0/ vertebrate_other]
|-
! 242
| notFound
| Clupea_harengus
| Atlantic herring
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000966335.1/ GCF_000966335.1_ASM96633v1]
(6915 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Clupea_harengus/all_assembly_versions/GCF_000966335.1_ASM96633v1/ vertebrate_other]
|-
! 243
| notFound
| Sinocyclocheilus_anshuiensis
| Bony fishes
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001515605.1/ GCF_001515605.1_SAMN03320099.WGS_v1.1]
(85682 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Sinocyclocheilus_anshuiensis/all_assembly_versions/GCF_001515605.1_SAMN03320099.WGS_v1.1/ vertebrate_other]
|-
! 244
| notFound
| Alligator_mississippiensis
| American alligator
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000281125.2/ GCF_000281125.2_ASM28112v3]
(9857 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Alligator_mississippiensis/all_assembly_versions/GCF_000281125.2_ASM28112v3/ vertebrate_other]
|-
! 245
| notFound
| Nestor_notabilis
| Kea
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000696875.1/ GCF_000696875.1_ASM69687v1]
(42180 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Nestor_notabilis/all_assembly_versions/GCF_000696875.1_ASM69687v1/ vertebrate_other]
|-
! 246
| notFound
| Apteryx&nbsp;australis&nbsp;mantelli
| notFound
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_001039765.1/ GCF_001039765.1_AptMant0]
(0 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Apteryx_australis_mantelli/all_assembly_versions/GCF_001039765.1_AptMant0/ vertebrate_other]
|-
! 247
| notFound
| Meleagris_gallopavo
| Turkey
| style="color:green;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000146605.2/ GCF_000146605.2_Turkey_5.0]
(231286 sequences)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_other/Meleagris_gallopavo/all_assembly_versions/GCF_000146605.2_Turkey_5.0/ vertebrate_other]
|-
! 248
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=amaVit1 amaVit1]
| Amazona&nbsp;vittata
| Parrot
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000332375.1/ GCA_000332375.1_AV1]
| vertebrate_other
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Amazona_vittata/all_assembly_versions/GCA_000332375.1_AV1/ GCA_000332375.1]
 
|-
! 249
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apaSpi1 apaSpi1]
| Apalone&nbsp;spinifera
| Spiny softshell turtle
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000385615.1/ GCA_000385615.1_ASM38561v1]
| vertebrate_other
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Apalone_spinifera/all_assembly_versions/GCA_000385615.1_ASM38561v1/ GCA_000385615.1]
 
|-
! 250
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=araMac1 araMac1]
| Ara&nbsp;macao
| Scarlet macaw
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000400695.1/ GCA_000400695.1_SMACv1.1]
| vertebrate_other
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Ara_macao/all_assembly_versions/GCA_000400695.1_SMACv1.1/ GCA_000400695.1]
 
|-
! 251
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dicLab1 dicLab1]
| Dicentrarchus&nbsp;labrax
| European sea bass
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000689215.1/ GCA_000689215.1_seabass_V1.0]
| vertebrate_other
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Dicentrarchus_labrax/all_assembly_versions/GCA_000689215.1_seabass_V1.0/ GCA_000689215.1]
 
|-
! 252
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nanPar1 nanPar1]
| Nanorana&nbsp;parkeri
| Tibetan frog
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000935625.1/ GCA_000935625.1_ASM93562v1]
| vertebrate_other
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Nanorana_parkeri/all_assembly_versions/GCA_000935625.1_ASM93562v1/ GCA_000935625.1]
 
|-
! 253
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sebNig1 sebNig1]
| Sebastes&nbsp;nigrocinctus
| Tiger rockfish
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000475235.1/ GCA_000475235.1_Snig1.0]
| vertebrate_other
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Sebastes_nigrocinctus/all_assembly_versions/GCA_000475235.1_Snig1.0/ GCA_000475235.1]
 
|-
! 254
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sebRub1 sebRub1]
| Sebastes&nbsp;rubrivinctus
| Flag rockfish
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000475215.1/ GCA_000475215.1_SRub1.0]
| vertebrate_other
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/vertebrate_other/Sebastes_rubrivinctus/all_assembly_versions/GCA_000475215.1_SRub1.0/ GCA_000475215.1]
 
|-
! 255
| acrEch0
| acrEch0
| Acromyrmex&nbsp;echinatior
| Acromyrmex_echinatior
| notFound
| Panamanian leafcutter ant
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000204515.1/ GCF_000204515.1_Aech_3.9]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000204515.1/ GCF_000204515.1_Aech_3.9]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000204515.1/ GCA_000204515.1_Aech_3.9]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Acromyrmex_echinatior/all_assembly_versions/GCF_000204515.1_Aech_3.9/ invertebrate]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Acromyrmex_echinatior/all_assembly_versions/GCF_000204515.1_Aech_3.9/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Acromyrmex_echinatior/all_assembly_versions/GCA_000204515.1_Aech_3.9/ GCA_000204515.1]
|-
|-
! 124
! 256
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel4 apiMel4]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel4 apiMel4]
| Apis&nbsp;mellifera
| Apis&nbsp;mellifera
Line 887: Line 2,313:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Apis_mellifera/all_assembly_versions/GCF_000002195.4_Amel_4.5/ invertebrate]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Apis_mellifera/all_assembly_versions/GCF_000002195.4_Amel_4.5/ invertebrate]
|-
|-
! 125
! 257
| attCep0
| attCep0
| Atta&nbsp;cephalotes
| Atta_cephalotes
| notFound
| Ants
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000143395.1/ GCF_000143395.1_Attacep1.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000143395.1/ GCF_000143395.1_Attacep1.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Atta_cephalotes/all_assembly_versions/GCF_000143395.1_Attacep1.0/ invertebrate]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Atta_cephalotes/all_assembly_versions/GCF_000143395.1_Attacep1.0/ invertebrate]
|-
|-
! 126
! 258
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem4 caeRem4]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem4 caeRem4]
| Caenorhabditis&nbsp;remanei
| Caenorhabditis&nbsp;remanei
| C. remanei
| C. remanei
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000149515.1/ GCF_000149515.1_ASM14951v1]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000149515.1/ GCF_000149515.1_ASM14951v1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000149515.1/ GCA_000149515.1_ASM14951v1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Caenorhabditis_remanei/all_assembly_versions/GCF_000149515.1_ASM14951v1/ invertebrate]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Caenorhabditis_remanei/all_assembly_versions/GCF_000149515.1_ASM14951v1/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Caenorhabditis_remanei/all_assembly_versions/GCA_000149515.1_ASM14951v1/ GCA_000149515.1]
|-
|-
! 127
! 259
| camFlo0
| camFlo0
| Camponotus&nbsp;floridanus
| Camponotus_floridanus
| notFound
| Florida carpenter ant
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000147175.1/ GCF_000147175.1_CamFlo_1.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000147175.1/ GCF_000147175.1_CamFlo_1.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000147175.1/ GCA_000147175.1_CamFlo_1.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Camponotus_floridanus/all_assembly_versions/GCF_000147175.1_CamFlo_1.0/ invertebrate]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Camponotus_floridanus/all_assembly_versions/GCF_000147175.1_CamFlo_1.0/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Camponotus_floridanus/all_assembly_versions/GCA_000147175.1_CamFlo_1.0/ GCA_000147175.1]
|-
|-
! 128
! 260
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce11 ce11]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce11 ce11]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=ce11 public]
| Caenorhabditis&nbsp;elegans
| Caenorhabditis&nbsp;elegans
| C. elegans
| C. elegans
Line 915: Line 2,348:
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Caenorhabditis_elegans/all_assembly_versions/GCF_000002985.6_WBcel235/ invertebrate]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Caenorhabditis_elegans/all_assembly_versions/GCF_000002985.6_WBcel235/ invertebrate]
|-
|-
! 129
! 261
| cerBir0
| cerBir0
| Cerapachys&nbsp;biroi
| Cerapachys_biroi
| notFound
| Clonal raider ant
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000611835.1/ GCF_000611835.1_CerBir1.0]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000611835.1/ GCF_000611835.1_CerBir1.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000611835.1/ GCA_000611835.1_CerBir1.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Cerapachys_biroi/all_assembly_versions/GCF_000611835.1_CerBir1.0/ invertebrate]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Cerapachys_biroi/all_assembly_versions/GCF_000611835.1_CerBir1.0/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Cerapachys_biroi/all_assembly_versions/GCA_000611835.1_CerBir1.0/ GCA_000611835.1]
|-
|-
! 130
! 262
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci3 ci3]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci3 ci3]
| Ciona&nbsp;intestinalis
| Ciona&nbsp;intestinalis
Line 928: Line 2,364:
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000224145.1/ GCF_000224145.1_KH]
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000224145.1/ GCF_000224145.1_KH]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Ciona_intestinalis/all_assembly_versions/GCF_000224145.1_KH/ invertebrate]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Ciona_intestinalis/all_assembly_versions/GCF_000224145.1_KH/ invertebrate]
|-
! 263
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm6 dm6]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=dm6 public]
| Drosophila&nbsp;melanogaster
| D. melanogaster
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001215.4/ GCF_000001215.4_Release_6_plus_ISO1_MT]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000001215.4/ GCA_000001215.4_Release_6_plus_ISO1_MT]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_melanogaster/all_assembly_versions/GCF_000001215.4_Release_6_plus_ISO1_MT/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_melanogaster/all_assembly_versions/GCA_000001215.4_Release_6_plus_ISO1_MT/ GCA_000001215.4]
|-
! 264
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna3 droAna3]
(has dups: 2)
| Drosophila&nbsp;ananassae
| D. ananassae
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005115.1/ GCF_000005115.1_dana_caf1]
(has dups: 2)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000005115.1/ GCA_000005115.1_dana_caf1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_ananassae/all_assembly_versions/GCF_000005115.1_dana_caf1/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_ananassae/all_assembly_versions/GCA_000005115.1_dana_caf1/ GCA_000005115.1]
|-
! 265
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBia2 droBia2]
| Drosophila&nbsp;biarmipes
| D. biarmipes
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000233415.1/ GCF_000233415.1_Dbia_2.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000233415.2/ GCA_000233415.2_Dbia_2.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_biarmipes/all_assembly_versions/GCF_000233415.1_Dbia_2.0/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_biarmipes/all_assembly_versions/GCA_000233415.2_Dbia_2.0/ GCA_000233415.2]
|-
! 266
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBip2 droBip2]
| Drosophila&nbsp;bipectinata
| D. bipectinata
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000236285.1/ GCF_000236285.1_Dbip_2.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000236285.2/ GCA_000236285.2_Dbip_2.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_bipectinata/all_assembly_versions/GCF_000236285.1_Dbip_2.0/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_bipectinata/all_assembly_versions/GCA_000236285.2_Dbip_2.0/ GCA_000236285.2]
|-
! 267
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEle2 droEle2]
| Drosophila&nbsp;elegans
| D. elegans
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000224195.1/ GCF_000224195.1_Dele_2.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000224195.2/ GCA_000224195.2_Dele_2.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_elegans/all_assembly_versions/GCF_000224195.1_Dele_2.0/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_elegans/all_assembly_versions/GCA_000224195.2_Dele_2.0/ GCA_000224195.2]
|-
! 268
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEre2 droEre2]
| Drosophila&nbsp;erecta
| D. erecta
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005135.1/ GCF_000005135.1_dere_caf1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000005135.1/ GCA_000005135.1_dere_caf1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_erecta/all_assembly_versions/GCF_000005135.1_dere_caf1/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_erecta/all_assembly_versions/GCA_000005135.1_dere_caf1/ GCA_000005135.1]
|-
! 269
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEug2 droEug2]
| Drosophila&nbsp;eugracilis
| D. eugracilis
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000236325.1/ GCF_000236325.1_Deug_2.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000236325.2/ GCA_000236325.2_Deug_2.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_eugracilis/all_assembly_versions/GCF_000236325.1_Deug_2.0/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_eugracilis/all_assembly_versions/GCA_000236325.2_Deug_2.0/ GCA_000236325.2]
|-
! 270
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droFic2 droFic2]
| Drosophila&nbsp;ficusphila
| D. ficusphila
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000220665.1/ GCF_000220665.1_Dfic_2.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000220665.2/ GCA_000220665.2_Dfic_2.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_ficusphila/all_assembly_versions/GCF_000220665.1_Dfic_2.0/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_ficusphila/all_assembly_versions/GCA_000220665.2_Dfic_2.0/ GCA_000220665.2]
|-
! 271
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droGri2 droGri2]
| Drosophila&nbsp;grimshawi
| D. grimshawi
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005155.2/ GCF_000005155.2_dgri_caf1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000005155.1/ GCA_000005155.1_dgri_caf1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_grimshawi/all_assembly_versions/GCF_000005155.2_dgri_caf1/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_grimshawi/all_assembly_versions/GCA_000005155.1_dgri_caf1/ GCA_000005155.1]
|-
! 272
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droKik2 droKik2]
| Drosophila&nbsp;kikkawai
| D. kikkawai
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000224215.1/ GCF_000224215.1_Dkik_2.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000224215.2/ GCA_000224215.2_Dkik_2.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_kikkawai/all_assembly_versions/GCF_000224215.1_Dkik_2.0/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_kikkawai/all_assembly_versions/GCA_000224215.2_Dkik_2.0/ GCA_000224215.2]
|-
! 273
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMir2 droMir2]
| Drosophila&nbsp;miranda
| D. miranda
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000269505.1/ GCF_000269505.1_DroMir_2.2]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000269505.2/ GCA_000269505.2_DroMir_2.2]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_miranda/all_assembly_versions/GCF_000269505.1_DroMir_2.2/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_miranda/all_assembly_versions/GCA_000269505.2_DroMir_2.2/ GCA_000269505.2]
|-
! 274
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj3 droMoj3]
| Drosophila&nbsp;mojavensis
| D. mojavensis
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005175.2/ GCF_000005175.2_dmoj_caf1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000005175.1/ GCA_000005175.1_dmoj_caf1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_mojavensis/all_assembly_versions/GCF_000005175.2_dmoj_caf1/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_mojavensis/all_assembly_versions/GCA_000005175.1_dmoj_caf1/ GCA_000005175.1]
|-
! 275
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droPer1 droPer1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=droPer1 public]
| Drosophila&nbsp;persimilis
| D. persimilis
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005195.2/ GCF_000005195.2_dper_caf1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000005195.1/ GCA_000005195.1_dper_caf1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_persimilis/all_assembly_versions/GCF_000005195.2_dper_caf1/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_persimilis/all_assembly_versions/GCA_000005195.1_dper_caf1/ GCA_000005195.1]
|-
! 276
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droRho2 droRho2]
| Drosophila&nbsp;rhopaloa
| D. rhopaloa
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000236305.1/ GCF_000236305.1_Drho_2.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000236305.2/ GCA_000236305.2_Drho_2.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_rhopaloa/all_assembly_versions/GCF_000236305.1_Drho_2.0/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_rhopaloa/all_assembly_versions/GCA_000236305.2_Drho_2.0/ GCA_000236305.2]
|-
! 277
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSuz1 droSuz1]
| Drosophila&nbsp;suzukii
| D. suzukii
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000472105.1/ GCF_000472105.1_Dsuzukii.v01]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000472105.1/ GCA_000472105.1_Dsuzukii.v01]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_suzukii/all_assembly_versions/GCF_000472105.1_Dsuzukii.v01/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_suzukii/all_assembly_versions/GCA_000472105.1_Dsuzukii.v01/ GCA_000472105.1]
|-
! 278
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droTak2 droTak2]
| Drosophila&nbsp;takahashii
| D. takahashii
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000224235.1/ GCF_000224235.1_Dtak_2.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000224235.2/ GCA_000224235.2_Dtak_2.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_takahashii/all_assembly_versions/GCF_000224235.1_Dtak_2.0/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_takahashii/all_assembly_versions/GCA_000224235.2_Dtak_2.0/ GCA_000224235.2]
|-
! 279
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir3 droVir3]
(has dups: 1)
| Drosophila&nbsp;virilis
| D. virilis
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005245.1/ GCF_000005245.1_dvir_caf1]
(has dups: 1)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000005245.1/ GCA_000005245.1_dvir_caf1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_virilis/all_assembly_versions/GCF_000005245.1_dvir_caf1/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_virilis/all_assembly_versions/GCA_000005245.1_dvir_caf1/ GCA_000005245.1]
|-
! 280
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droWil2 droWil2]
| Drosophila&nbsp;willistoni
| D. willistoni
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005925.1/ GCF_000005925.1_dwil_caf1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000005925.1/ GCA_000005925.1_dwil_caf1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_willistoni/all_assembly_versions/GCF_000005925.1_dwil_caf1/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Drosophila_willistoni/all_assembly_versions/GCA_000005925.1_dwil_caf1/ GCA_000005925.1]
|-
! 281
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak3 droYak3]
| Drosophila&nbsp;yakuba
| D. yakuba
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005975.2/ GCF_000005975.2_dyak_caf1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Drosophila_yakuba/all_assembly_versions/GCF_000005975.2_dyak_caf1/ invertebrate]
|-
! 282
| harSal0
| Harpegnathos_saltator
| Jerdon's jumping ant
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000147195.1/ GCF_000147195.1_HarSal_1.0]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000147195.1/ GCA_000147195.1_HarSal_1.0]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Harpegnathos_saltator/all_assembly_versions/GCF_000147195.1_HarSal_1.0/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Harpegnathos_saltator/all_assembly_versions/GCA_000147195.1_HarSal_1.0/ GCA_000147195.1]
|-
! 283
| style="color:red;" | linHum0
(has dups: 1)
| Linepithema_humile
| Argentine ant
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000217595.1/ GCF_000217595.1_Lhum_UMD_V04]
(has dups: 1)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000217595.1/ GCA_000217595.1_Lhum_UMD_V04]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Linepithema_humile/all_assembly_versions/GCF_000217595.1_Lhum_UMD_V04/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Linepithema_humile/all_assembly_versions/GCA_000217595.1_Lhum_UMD_V04/ GCA_000217595.1]
|-
! 284
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lotGig0 lotGig0]
| Lottia&nbsp;gigantea
| Limpet
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000327385.1/ GCF_000327385.1_Helro1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000327385.1/ GCA_000327385.1_Helro1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Lottia_gigantea/all_assembly_versions/GCF_000327385.1_Helro1/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Lottia_gigantea/all_assembly_versions/GCA_000327385.1_Helro1/ GCA_000327385.1]
|-
! 285
| pogBar0
| Pogonomyrmex_barbatus
| Red harvester ant
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000187915.1/ GCF_000187915.1_Pbar_UMD_V03]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000187915.1/ GCA_000187915.1_Pbar_UMD_V03]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Pogonomyrmex_barbatus/all_assembly_versions/GCF_000187915.1_Pbar_UMD_V03/ invertebrate]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Pogonomyrmex_barbatus/all_assembly_versions/GCA_000187915.1_Pbar_UMD_V03/ GCA_000187915.1]
|-
! 286
| solInv0
| Solenopsis_invicta
| Red fire ant
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000188075.1/ GCF_000188075.1_Si_gnG]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Solenopsis_invicta/all_assembly_versions/GCF_000188075.1_Si_gnG/ invertebrate]
|-
! 287
| style="color:red;" | [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur4 strPur4]
(has dups: 1)
| Strongylocentrotus&nbsp;purpuratus
| S. purpuratus
| style="color:red;" | [http://www.ncbi.nlm.nih.gov/assembly/GCF_000002235.3/ GCF_000002235.3_Spur_3.1]
(has dups: 1)
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Strongylocentrotus_purpuratus/all_assembly_versions/GCF_000002235.3_Spur_3.1/ invertebrate]
|-
! 288
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ancCey1 ancCey1]
| notFound
| A. ceylanicum
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000688135.1/ GCA_000688135.1_Acey_2013.11.30.genDNA]
| invertebrate
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/notFound/all_assembly_versions/GCA_000688135.1_Acey_2013.11.30.genDNA/ GCA_000688135.1]
|-
! 289
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aplCal0 aplCal0]
| notFound
| Sea hare
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000002075.2/ GCA_000002075.2_AplCal3.0]
| invertebrate
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/notFound/all_assembly_versions/GCA_000002075.2_AplCal3.0/ GCA_000002075.2]
|-
! 290
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bioGla0 bioGla0]
| notFound
| Snail
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000457365.1/ GCA_000457365.1_ASM45736v1]
| invertebrate
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/notFound/all_assembly_versions/GCA_000457365.1_ASM45736v1/ GCA_000457365.1]
|-
! 291
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeAng1 caeAng1]
| notFound
| C. angaria
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000165025.1/ GCA_000165025.1_ps1010rel4]
| invertebrate
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/notFound/all_assembly_versions/GCA_000165025.1_ps1010rel4/ GCA_000165025.1]
|-
! 292
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap4 caeJap4]
| notFound
| C. japonica
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000147155.1/ GCA_000147155.1_C_japonica-7.0.1]
| invertebrate
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/notFound/all_assembly_versions/GCA_000147155.1_C_japonica-7.0.1/ GCA_000147155.1]
|-
! 293
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caePb3 caePb3]
| notFound
| C. brenneri
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000143925.2/ GCA_000143925.2_C_brenneri-6.0.1b]
| invertebrate
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/notFound/all_assembly_versions/GCA_000143925.2_C_brenneri-6.0.1b/ GCA_000143925.2]
|-
! 294
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp111 caeSp111]
| notFound
| C. tropicalis
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000186765.1/ GCA_000186765.1_Caenorhabditis_sp11_JU1373-3.0.1]
| invertebrate
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/notFound/all_assembly_versions/GCA_000186765.1_Caenorhabditis_sp11_JU1373-3.0.1/ GCA_000186765.1]
|-
! 295
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci1 ci1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=ci1 public]
| notFound
| C. intestinalis
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000183065.1/ GCA_000183065.1_v1.0]
| invertebrate
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/notFound/all_assembly_versions/GCA_000183065.1_v1.0/ GCA_000183065.1]
|-
! 296
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAlb1 droAlb1]
| notFound
| D. albomicans
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000298335.1/ GCA_000298335.1_DroAlb_1.0]
| invertebrate
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/notFound/all_assembly_versions/GCA_000298335.1_DroAlb_1.0/ GCA_000298335.1]
|-
! 297
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSec1 droSec1]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=droSec1 public]
| notFound
| D. sechellia
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000005215.1/ GCA_000005215.1_dsec_caf1]
| invertebrate
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/notFound/all_assembly_versions/GCA_000005215.1_dsec_caf1/ GCA_000005215.1]
|-
! 298
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melInc1 melInc1]
| notFound
| M. incognita
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000180415.1/ GCA_000180415.1_ASM18041v1]
| invertebrate
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/notFound/all_assembly_versions/GCA_000180415.1_ASM18041v1/ GCA_000180415.1]
|-
! 299
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priPac2 priPac2]
| notFound
| P. pacificus
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000180635.1/ GCA_000180635.1_ASM18063v1]
| invertebrate
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/notFound/all_assembly_versions/GCA_000180635.1_ASM18063v1/ GCA_000180635.1]
|-
! 300
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strRat2 strRat2]
| notFound
| Threadworm
| (no refseq)
[http://www.ncbi.nlm.nih.gov/assembly/GCA_001040885.1/ GCA_001040885.1_S_ratti_ED321]
| invertebrate
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/notFound/all_assembly_versions/GCA_001040885.1_S_ratti_ED321/ GCA_001040885.1]
|-
! 301
| araTha1
| Arabidopsis_thaliana
| Thale cress
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001735.3/ GCF_000001735.3_TAIR10]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/plant/Arabidopsis_thaliana/all_assembly_versions/GCF_000001735.3_TAIR10/ plant]
|-
! 302
| ricCom1
| Ricinus_communis
| Castor bean
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000151685.1/ GCF_000151685.1_JCVI_RCG_1.1]
[http://www.ncbi.nlm.nih.gov/assembly/GCA_000151685.2/ GCA_000151685.2_JCVI_RCG_1.1]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/plant/Ricinus_communis/all_assembly_versions/GCF_000151685.1_JCVI_RCG_1.1/ plant]
[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/plant/Ricinus_communis/all_assembly_versions/GCA_000151685.2_JCVI_RCG_1.1/ GCA_000151685.2]
|-
! 303
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bunEbo1 bunEbo1]
| Bundibugyo&nbsp;virus
| Bundibugyo ebolavirus
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000889155.1/ GCF_000889155.1_ViralProj51245]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Bundibugyo_virus/all_assembly_versions/GCF_000889155.1_ViralProj51245/ viral]
|-
! 304
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=resEbo1 resEbo1]
| Reston&nbsp;ebolavirus
| Reston ebolavirus
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000854085.1/ GCF_000854085.1_ViralProj15006]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Reston_ebolavirus/all_assembly_versions/GCF_000854085.1_ViralProj15006/ viral]
|-
! 305
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sudEbo1 sudEbo1]
| Sudan&nbsp;ebolavirus
| Sudan ebolavirus
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000855585.1/ GCF_000855585.1_ViralProj15012]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Sudan_ebolavirus/all_assembly_versions/GCF_000855585.1_ViralProj15012/ viral]
|-
! 306
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taiEbo1 taiEbo1]
| Tai&nbsp;Forest&nbsp;ebolavirus
| Tai forest ebolavirus
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000888475.1/ GCF_000888475.1_ViralProj51257]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Tai_Forest_ebolavirus/all_assembly_versions/GCF_000888475.1_ViralProj51257/ viral]
|-
! 307
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zaiEbo1 zaiEbo1]
| Zaire&nbsp;ebolavirus
| Zaire ebolavirus
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000848505.1/ GCF_000848505.1_ViralProj14703]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/viral/Zaire_ebolavirus/all_assembly_versions/GCF_000848505.1_ViralProj14703/ viral]
|-
! 308
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sacCer3 sacCer3]
[http://genome.ucsc.edu/cgi-bin/hgTracks?db=sacCer3 public]
| Saccharomyces&nbsp;cerevisiae
| S. cerevisiae
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000146045.2/ GCF_000146045.2_R64]
| [ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/fungi/Saccharomyces_cerevisiae/all_assembly_versions/GCF_000146045.2_R64/ fungi]
|}
|}
Found 269 matched test browser assemblies from a total of 504 assemblies on the test browser.
Found 82 matched public genome browser assemblies from a total of 176 assemblies on the public genome browser server.
* vertebrate_mammalian matched 99 assemblies from a total of 125
* vertebrate_other matched 87 assemblies from a total of 109
* fungi matched 1 assemblies from a total of 213
* plant matched 2 assemblies from a total of 86
* viral matched 5 assemblies from a total of 6092
* invertebrate matched 46 assemblies from a total of 121

Latest revision as of 17:10, 24 August 2016

The correspondences show here are exact, subset, and near match. NCBI assemblies with no equivalent UCSC database are listed.

The columns can be sorted. Click on the small arrow icon next to the column header label.

The external links go to:

  • test browser - genome-test.soe.ucsc.edu genome browser
    • public browser - when available the genome.ucsc.edu browser
  • RefSeq assembly - assembly information page at NCBI for the refseq version
    • Genbank assembly - assembly information page at NCBI when equivalent, genbank version
  • RefSeq FTP - ftp directory at NCBI where the RefSeq assembly can be obtained
    • Genbank FTP - ftp directory for the genbank version when equivalent


Note about the (has dups N) indication. Some older assemblies have entire sequences duplicated in multiple contigs in both the NCBI assembly and the UCSC assembly. Most newer UCSC assemblies have removed the duplicate contigs, and newer NCBI assemblies now also remove the duplicate contigs. The N indicates how many duplicate sequences are in the assembly. These duplicate contigs will cause confusion when coordinating chromosome names.

Note about the (subset N of M) indication. When all contigs of one assembly are completely found in the other assembly, it is marked as a (subset N of M). This is often the result of one assembly including a chrM/chrMT sequence, or duplicate sequences removed from one of the assemblies. The N of M counts the number of sequences in the subset vs. the superset after duplicate sequences have been removed.

Note about the (near match N of M) indication. When almost all contigs of one assembly are completely found in the other assembly, it is marked as a (near match N of M). This is often the result of different sequences for chrM/chrMT, included in each of the assemblies, or a different combination rearrangement of sequences in one assembly. For example monDom5 at UCSC combines all unplaced contigs into a single chrUn sequence whereas NCBI keeps those contigs as separate sequences. The N of M counts the number of sequences identical vs. the total sequences in the other assembly. The limit in this notation is a maximum difference of two sequences in the smaller assembly, and only for vertebrate_mammalian and vertebrate_other assemblies.


NCBI assemblies for the sub-groups vertebrate_mammalian and vertebrate_other with no equivalent UCSC database are indicated as (N sequences) where N is the number of sequences in the NCBI assembly.

UCSC to Genbank assembly accession correspondence
count test browser

public browser

scientific name(s) common name RefSeq assembly

Genbank assembly

RefSeq FTP

Genbank FTP

1 CHM1 Homo sapiens Homo sapiens hydatidiform mole assembly chm1 GCF_000306695.2_CHM1_1.1 vertebrate_mammalian
2 ailMel1

public

Ailuropoda melanoleuca Panda GCF_000004335.2_AilMel_1.0 vertebrate_mammalian
3 balAcu1

public

Balaenoptera acutorostrata Minke whale GCF_000493695.1_BalAcu1.0 vertebrate_mammalian
4 bosTau8

public

Bos taurus Cow GCF_000003055.5_Bos_taurus_UMD_3.1.1 vertebrate_mammalian
5 bubBub1 Bubalus bubalis Water buffalo GCF_000471725.1_UMD_CASPUR_WB_2.0 vertebrate_mammalian
6 calJac3

public

Callithrix jacchus Marmoset GCF_000004665.1_Callithrix_jacchus-3.2

GCA_000004665.1_Callithrix_jacchus-3.2

vertebrate_mammalian

GCA_000004665.1

7 camFer1 Camelus ferus Bactrian camel GCF_000311805.1_CB1 vertebrate_mammalian
8 canFam3

public

Canis lupus Dog GCF_000002285.3_CanFam3.1 vertebrate_mammalian
9 capHir1 Capra hircus Domestic goat GCF_000317765.1_CHIR_1.0 vertebrate_mammalian
10 cavPor3

public

Cavia porcellus Guinea pig GCF_000151735.1_Cavpor3.0 vertebrate_mammalian
11 cerSim1

public

Ceratotherium simum White rhinoceros GCF_000283155.1_CerSimSim1.0 vertebrate_mammalian
12 chlSab2 Chlorocebus sabaeus Green monkey GCF_000409795.2_Chlorocebus_sabeus_1.1 vertebrate_mammalian
13 chrAsi1 Chrysochloris asiatica Cape golden mole GCF_000296735.1_ChrAsi1.0 vertebrate_mammalian
14 colAng1 Colobus angolensis Angolan colobus GCF_000951035.1_Cang.pa_1.0

GCA_000951035.1_Cang.pa_1.0

vertebrate_mammalian

GCA_000951035.1

15 dasNov3

public

Dasypus novemcinctus Armadillo GCF_000208655.1_Dasnov3.0 vertebrate_mammalian
16 echTel2

public

Echinops telfairi Tenrec GCF_000313985.1_EchTel2.0 vertebrate_mammalian
17 eleEdw1 Elephantulus edwardii Cape elephant shrew GCF_000299155.1_EleEdw1.0

GCA_000299155.1_EleEdw1.0

vertebrate_mammalian

GCA_000299155.1

18 eriEur2

public

Erinaceus europaeus Hedgehog GCF_000296755.1_EriEur2.0 vertebrate_mammalian
19 felCat5

(has dups: 1) public

Felis catus Cat GCF_000181335.1_Felis_catus-6.2

(has dups: 1)

vertebrate_mammalian
20 felCat8

public

Felis catus Cat GCF_000181335.2_Felis_catus_8.0 vertebrate_mammalian
21 galVar1

public

Galeopterus variegatus Malayan flying lemur GCF_000696425.1_G_variegatus-3.0.2 vertebrate_mammalian
22 hetGla2

public

Heterocephalus glaber Naked mole-rat GCF_000247695.1_HetGla_female_1.0 vertebrate_mammalian
23 hg38

public

Homo sapiens Human GCF_000001405.26_GRCh38

GCA_000001405.15_GRCh38

vertebrate_mammalian

GCA_000001405.15

24 lepWed1 Leptonychotes weddellii Weddell seal GCF_000349705.1_LepWed1.0 vertebrate_mammalian
25 lipVex1 Lipotes vexillifer Yangtze river dolphin GCF_000442215.1_Lipotes_vexillifer_v1 vertebrate_mammalian
26 macFas5

public

Macaca fascicularis Crab-eating macaque GCF_000364345.1_Macaca_fascicularis_5.0 vertebrate_mammalian
27 mesAur1 Mesocricetus auratus Golden hamster GCF_000349665.1_MesAur1.0 vertebrate_mammalian
28 micMur2

public

Microcebus murinus Mouse lemur GCF_000165445.1_Mmur_2.0

GCA_000165445.2_Mmur_2.0

vertebrate_mammalian

GCA_000165445.2

29 micOch1 Microtus ochrogaster Prairie vole GCF_000317375.1_MicOch1.0

GCA_000317375.1_MicOch1.0

vertebrate_mammalian

GCA_000317375.1

30 myoBra1 Myotis brandtii Brandt's myotis (bat) GCF_000412655.1_ASM41265v1

GCA_000412655.1_ASM41265v1

vertebrate_mammalian

GCA_000412655.1

31 myoDav1 Myotis davidii David's myotis (bat) GCF_000327345.1_ASM32734v1

GCA_000327345.1_ASM32734v1

vertebrate_mammalian

GCA_000327345.1

32 myoLuc2

public

Myotis lucifugus Microbat GCF_000147115.1_Myoluc2.0

GCA_000147115.1_Myoluc2.0

vertebrate_mammalian

GCA_000147115.1

33 nanGal1 Nannospalax galili Upper Galilee mountains blind mole rat GCF_000622305.1_S.galili_v1.0 vertebrate_mammalian
34 orcOrc1 Orcinus orca Killer whale GCF_000331955.2_Oorc_1.1

GCA_000331955.2_Oorc_1.1

vertebrate_mammalian

GCA_000331955.2

35 oryAfe1 Orycteropus afer Aardvark GCF_000298275.1_OryAfe1.0 vertebrate_mammalian
36 otoGar3

(has dups: 139) public

Otolemur garnettii Bushbaby GCF_000181295.1_OtoGar3

(has dups: 139) GCA_000181295.3_OtoGar3

vertebrate_mammalian

GCA_000181295.3

37 oviAri3

public

Ovis aries Sheep GCF_000298735.1_Oar_v3.1 vertebrate_mammalian
38 panHod1 Pantholops hodgsonii Tibetan antelope GCF_000400835.1_PHO1.0 vertebrate_mammalian
39 panPan1

public

Pan paniscus Bonobo GCF_000258655.1_panpan1 vertebrate_mammalian
40 panPan2 Pan paniscus Bonobo GCF_000258655.2_panpan1.1 vertebrate_mammalian
41 panTig1 Panthera tigris Amur tiger GCF_000464555.1_PanTig1.0 vertebrate_mammalian
42 panTro4

public

Pan troglodytes Chimp GCF_000001515.6_Pan_troglodytes-2.1.4 vertebrate_mammalian
43 panTro5 Pan troglodytes Chimp GCF_000001515.7_Pan_tro_3.0 vertebrate_mammalian
44 papAnu2

public

Papio anubis Baboon GCF_000264685.1_Panu_2.0

GCA_000264685.1_Panu_2.0

vertebrate_mammalian

GCA_000264685.1

45 perManBai1 Peromyscus maniculatus Prairie deer mouse GCF_000500345.1_Pman_1.0

GCA_000500345.1_Pman_1.0

vertebrate_mammalian

GCA_000500345.1

46 phyCat1 Physeter catodon Sperm whale GCF_000472045.1_Physeter_macrocephalus-2.0.2 vertebrate_mammalian
47 rheMac8

public

Macaca mulatta Rhesus GCF_000772875.2_Mmul_8.0.1 vertebrate_mammalian
48 rhiRox1 Rhinopithecus roxellana Golden snub-nosed monkey GCF_000769185.1_Rrox_v1 vertebrate_mammalian
49 rouAeg1 Rousettus aegyptiacus Egyptian rousette GCF_001466805.2_Raegyp2.0 vertebrate_mammalian
50 sarHar1

public

Sarcophilus harrisii Tasmanian devil GCF_000189315.1_Devil_ref_v7.0

GCA_000189315.1_Devil_ref_v7.0

vertebrate_mammalian

GCA_000189315.1

51 sorAra2

public

Sorex araneus Shrew GCF_000181275.1_SorAra2.0

GCA_000181275.2_SorAra2.0

vertebrate_mammalian

GCA_000181275.2

52 speTri2

public

Ictidomys tridecemlineatus Squirrel GCF_000236235.1_SpeTri2.0

GCA_000236235.1_SpeTri2.0

vertebrate_mammalian

GCA_000236235.1

53 susScr3

public

Sus scrofa Pig GCF_000003025.5_Sscrofa10.2 vertebrate_mammalian
54 tarSyr2

public

Carlito syrichta Tarsier GCF_000164805.1_Tarsius_syrichta-2.0.1 vertebrate_mammalian
55 tarSyr2

public

Tarsius syrichta Tarsier GCF_000164805.1_Tarsius_syrichta-2.0.1 vertebrate_mammalian
56 triMan1

public

Trichechus manatus Manatee GCF_000243295.1_TriManLat1.0 vertebrate_mammalian
57 tupChi1 Tupaia chinensis Chinese tree shrew GCF_000334495.1_TupChi_1.0

GCA_000334495.1_TupChi_1.0

vertebrate_mammalian

GCA_000334495.1

58 ursMar1 Ursus maritimus Polar bear GCF_000687225.1_UrsMar_1.0 vertebrate_mammalian
59 mm10

(subset: 66 of 179) public

Mus musculus Mouse GCF_000001635.22_GRCm38.p2 vertebrate_mammalian
60 mm10

(subset: 66 of 182) public

Mus musculus Mouse GCF_000001635.23_GRCm38.p3 vertebrate_mammalian
61 mm10

(subset: 66 of 196) public

Mus musculus Mouse GCF_000001635.24_GRCm38.p4 vertebrate_mammalian
62 mm10

(subset: 66 of 207) public

Mus musculus Mouse GCF_000001635.25_GRCm38.p5 vertebrate_mammalian
63 rn6

(subset: 953 of 953) public

Rattus norvegicus Rat GCF_000001895.5_Rnor_6.0

(has dups: 1)

vertebrate_mammalian
64 gorGor3

(subset: 46823 of 50196) public

Gorilla gorilla Gorilla GCF_000151905.1_gorGor3.1 vertebrate_mammalian
65 vicPac2

(subset: 276611 of 276611) public

Vicugna pacos Alpaca GCF_000164845.1_Vicugna_pacos-2.0.1

(has dups: 115)

vertebrate_mammalian
66 saiBol1

(subset: 2685 of 2686) public

Saimiri boliviensis Squirrel monkey GCF_000235385.1_SaiBol1.0

GCA_000235385.1_SaiBol1.0

vertebrate_mammalian

GCA_000235385.1

67 octDeg1

(subset: 7134 of 7134)

Octodon degus Brush-tailed rat GCF_000260255.1_OctDeg1.0

(has dups: 1)

vertebrate_mammalian
68 conCri1

(subset: 2038 of 2038)

Condylura cristata Star-nosed mole GCF_000260355.1_ConCri1.0

(has dups: 2)

vertebrate_mammalian
69 chiLan1

(subset: 2838 of 2839)

Chinchilla lanigera Chinchilla GCF_000276665.1_ChiLan1.0

GCA_000276665.1_ChiLan1.0

vertebrate_mammalian

GCA_000276665.1

70 jacJac1

(subset: 10896 of 10896)

Jaculus jaculus Lesser Egyptian jerboa GCF_000280705.1_JacJac1.0

(has dups: 2)

vertebrate_mammalian
71 ochPri3

(subset: 10420 of 10420) public

Ochotona princeps Pika GCF_000292845.1_OchPri3.0

(has dups: 1)

vertebrate_mammalian
72 bosMut1

(subset: 41191 of 41192)

Bos mutus Wild yak GCF_000298355.1_BosGru_v2.0

GCA_000298355.1_BosGru_v2.0

vertebrate_mammalian

GCA_000298355.1

73 eptFus1

(subset: 6788 of 6788)

Eptesicus fuscus Big brown bat GCF_000308155.1_EptFus1.0

(has dups: 1)

vertebrate_mammalian
74 pteAle1

(subset: 65597 of 65598)

Pteropus alecto Black flying-fox GCF_000325575.1_ASM32557v1

GCA_000325575.1_ASM32557v1

vertebrate_mammalian

GCA_000325575.1

75 loxAfr3

public

Loxodonta africana Elephant GCF_000001905.1_Loxafr3.0

(subset: 2352 of 2353)

vertebrate_mammalian
76 ornAna1

public

Ornithorhynchus anatinus Platypus GCF_000002275.2_Ornithorhynchus_anatinus_5.0.1

(subset: 200154 of 201523)

vertebrate_mammalian
77 bosTau6

public

Bos taurus Cow GCF_000003055.6_Bos_taurus_UMD_3.1.1

(subset: 3144 of 3317)

vertebrate_mammalian
78 oryCun2

public

Oryctolagus cuniculus Rabbit GCF_000003625.3_OryCun2.0

(subset: 3241 of 3242)

vertebrate_mammalian
79 nomLeu3

public

Nomascus leucogenys Gibbon GCF_000146795.2_Nleu_3.0

(subset: 17484 of 17492) GCA_000146795.3_Nleu_3.0

vertebrate_mammalian

GCA_000146795.3

80 turTru2

(has dups: 9) public

Tursiops truncatus Dolphin GCF_000151865.2_Ttru_1.4

(has dups: 9) (subset: 240548 of 240891)

vertebrate_mammalian
81 vicPac2

public

Vicugna pacos Alpaca GCF_000164845.2_Vicugna_pacos-2.0.2

(has dups: 115) (subset: 276610 of 276611)

vertebrate_mammalian
82 criGri1

public

Cricetulus griseus Chinese hamster GCF_000419365.1_C_griseus_v1.0

(subset: 52710 of 52711)

vertebrate_mammalian
83 bisBis1 Bison bison Bison GCF_000754665.1_Bison_UMD1.0

(subset: 128431 of 450182)

vertebrate_mammalian
84 panTro3

public

Pan troglodytes Chimp GCF_000001515.5_Pan_troglodytes-2.1.4

(near match: 24127 of 24129)

vertebrate_mammalian
85 ornAna2

public

Ornithorhynchus anatinus Platypus GCF_000002275.2_Ornithorhynchus_anatinus_5.0.1

(near match: 200153 of 200154)

vertebrate_mammalian
86 rheMac2

(near match: 21 of 22) public

Macaca mulatta Rhesus GCF_000002255.3_Mmul_051212 vertebrate_mammalian
87 monDom5

(near match: 10 of 11) public

Monodelphis domestica Opossum GCF_000002295.2_MonDom5 vertebrate_mammalian
88 equCab2

(near match: 33 of 34) public

Equus caballus Horse GCF_000002305.2_EquCab2.0 vertebrate_mammalian
89 bosTau7

(near match: 11691 of 11692) public

Bos taurus Cow GCF_000003205.5_Btau_4.6.1 vertebrate_mammalian
90 equPrz1

(near match: 53096 of 53097)

Equus przewalskii Przewalski horse GCF_000696695.1_Burgud vertebrate_mammalian
91 notFound Mustela putorius furo notFound GCF_000215625.1_MusPutFur1.0

(0 sequences)

vertebrate_mammalian
92 notFound Equus_asinus Ass GCF_001305755.1_ASM130575v1

(2167 sequences)

vertebrate_mammalian
93 notFound Homo_sapiens Human GCF_000001405.28_GRCh38.p2

(486 sequences)

vertebrate_mammalian
94 notFound Camelus_dromedarius Arabian camel GCF_000767585.1_PRJNA234474_Ca_dromedarius_V1.0

(32573 sequences)

vertebrate_mammalian
95 notFound Homo_sapiens Human GCF_000001405.34_GRCh38.p8

(543 sequences)

vertebrate_mammalian
96 notFound Homo_sapiens Human GCF_000001405.33_GRCh38.p7

(525 sequences)

vertebrate_mammalian
97 notFound Pongo_abelii Sumatran orangutan GCF_000001545.4_P_pygmaeus_2.0.2

(61535 sequences)

vertebrate_mammalian
98 notFound Orcinus_orca Killer whale GCF_000199955.1_ASM19995v1

(1 sequences)

vertebrate_mammalian
99 notFound Homo_sapiens Human GCF_000001405.31_GRCh38.p5

(517 sequences)

vertebrate_mammalian
100 notFound Mus_musculus House mouse GCF_000002165.2_Mm_Celera

(12503 sequences)

vertebrate_mammalian
101 notFound Mandrillus_leucophaeus Drill GCF_000951045.1_Mleu.le_1.0

(12821 sequences)

vertebrate_mammalian
102 notFound Ailuropoda_melanoleuca Giant panda GCF_000004335.1_AilMel_1.0

(81466 sequences)

vertebrate_mammalian
103 notFound Camelus_bactrianus Bactrian camel GCF_000767855.1_Ca_bactrianus_MBC_1.0

(35455 sequences)

vertebrate_mammalian
104 notFound Ovis_aries Sheep GCF_000298735.2_Oar_v4.0

(5466 sequences)

vertebrate_mammalian
105 notFound Homo_sapiens Human GCF_000001405.30_GRCh38.p4

(510 sequences)

vertebrate_mammalian
106 notFound Ovis aries musimon notFound GCF_000765115.1_Oori1

(0 sequences)

vertebrate_mammalian
107 notFound Rattus_norvegicus Norway rat GCF_000002265.2_Rn_Celera

(has dups: 5) (7041 sequences)

vertebrate_mammalian
108 notFound Homo_sapiens Human GCF_000001405.29_GRCh38.p3

(494 sequences)

vertebrate_mammalian
109 notFound Manis_javanica Malayan pangolin GCF_001685135.1_ManJav1.0

(80670 sequences)

vertebrate_mammalian
110 notFound Dipodomys_ordii Ord's kangaroo rat GCF_000151885.1_Dord_2.0

(65193 sequences)

vertebrate_mammalian
111 notFound Miniopterus_natalensis Bats GCF_001595765.1_Mnat.v1

(1269 sequences)

vertebrate_mammalian
112 notFound Pteropus_vampyrus Large flying fox GCF_000151845.1_Pvam_2.0

(36094 sequences)

vertebrate_mammalian
113 notFound Homo_sapiens Human GCF_000001405.32_GRCh38.p6

(521 sequences)

vertebrate_mammalian
114 notFound Cebus capucinus imitator notFound GCF_001604975.1_Cebus_imitator-1.0

(0 sequences)

vertebrate_mammalian
115 notFound Homo_sapiens Human GCF_000001405.27_GRCh38.p1

(471 sequences)

vertebrate_mammalian
116 notFound Aotus_nancymaae Ma's night monkey GCF_000952055.1_Anan_1.0

(29223 sequences)

vertebrate_mammalian
117 notFound Macaca_nemestrina Pig-tailed macaque GCF_000956065.1_Mnem_1.0

(9733 sequences)

vertebrate_mammalian
118 notFound Bos_taurus Cattle GCF_000003205.7_Btau_5.0.1

(3143 sequences)

vertebrate_mammalian
119 notFound Cercocebus_atys Sooty mangabey GCF_000955945.1_Caty_1.0

(11433 sequences)

vertebrate_mammalian
120 notFound Fukomys_damarensis Damara mole-rat GCF_000743615.1_DMR_v1.0

(74730 sequences)

vertebrate_mammalian
121 notFound Marmota marmota marmota notFound GCF_001458135.1_marMar2.1

(0 sequences)

vertebrate_mammalian
122 notFound Cricetulus_griseus Chinese hamster GCF_000223135.1_CriGri_1.0

(109152 sequences)

vertebrate_mammalian
123 notFound Papio_anubis Olive baboon GCF_000264685.2_Panu_2.0

(63251 sequences)

vertebrate_mammalian
124 notFound Odobenus rosmarus divergens notFound GCF_000321225.1_Oros_1.0

(0 sequences)

vertebrate_mammalian
125 notFound Acinonyx_jubatus Cheetah GCF_001443585.1_aciJub1

(14383 sequences)

vertebrate_mammalian
126 notFound Propithecus_coquereli Coquerel's sifaka GCF_000956105.1_Pcoq_1.0

(22539 sequences)

vertebrate_mammalian
127 choHof1

public

Choloepus hoffmanni Sloth (no refseq)

GCA_000164785.1_ChoHof1.0

vertebrate_mammalian

GCA_000164785.1

128 dipOrd1

public

Dipodomys ordii Kangaroo rat (no refseq)

GCA_000151885.1_Dipord1.0

vertebrate_mammalian

GCA_000151885.1

129 eidHel1 Eidolon helvum Straw colored fruit bat (no refseq)

GCA_000465285.1_ASM46528v1

vertebrate_mammalian

GCA_000465285.1

130 macEug2

public

Macropus eugenii Wallaby (no refseq)

GCA_000004035.1_Meug_1.1

vertebrate_mammalian

GCA_000004035.1

131 megLyr1 Megaderma lyra Indian false vampire (no refseq)

GCA_000465345.1_ASM46534v1

vertebrate_mammalian

GCA_000465345.1

132 micMur1

public

Microcebus murinus Mouse lemur (no refseq)

GCA_000165445.1_ASM16544v1

vertebrate_mammalian

GCA_000165445.1

133 ochPri2

public

Ochotona princeps Pika (no refseq)

GCA_000164825.1_ASM16482v1

vertebrate_mammalian

GCA_000164825.1

134 odoRosDiv1 Odobenus rosmarus divergens Pacific walrus (no refseq)

GCA_000321225.1_Oros_1.0

vertebrate_mammalian

GCA_000321225.1

135 proCap1

public

Procavia capensis Rock hyrax (no refseq)

GCA_000152225.1_Procap1.0

vertebrate_mammalian

GCA_000152225.1

136 ptePar1 Pteronotus parnellii Parnell's mustached bat (no refseq)

GCA_000465405.1_ASM46540v1

vertebrate_mammalian

GCA_000465405.1

137 pteVam1

public

Pteropus vampyrus Megabat (no refseq)

GCA_000151845.1_Ptevap1.0

vertebrate_mammalian

GCA_000151845.1

138 allMis1

public

Alligator mississippiensis American alligator GCF_000281125.1_allMis0.2 vertebrate_other
139 allSin1 Alligator sinensis Chinese alligator GCF_000455745.1_ASM45574v1 vertebrate_other
140 anaPla1 Anas platyrhynchos Mallard duck GCF_000355885.1_BGI_duck_1.0 vertebrate_other
141 anoCar2

public

Anolis carolinensis Lizard GCF_000090745.1_AnoCar2.0

GCA_000090745.2_AnoCar2.0

vertebrate_other

GCA_000090745.2

142 apaVit1 Apaloderma vittatum Bar tailed trogon GCF_000703405.1_ASM70340v1

GCA_000703405.1_ASM70340v1

vertebrate_other

GCA_000703405.1

143 aptFor1 Aptenodytes forsteri Emperor penguin GCF_000699145.1_ASM69914v1

GCA_000699145.1_ASM69914v1

vertebrate_other

GCA_000699145.1

144 bucRhi1 Buceros rhinoceros Rhinoceros hornbill GCF_000710305.1_ASM71030v1

GCA_000710305.1_ASM71030v1

vertebrate_other

GCA_000710305.1

145 calAnn1 Calypte anna Anna's hummingbird GCF_000699085.1_ASM69908v1

GCA_000699085.1_ASM69908v1

vertebrate_other

GCA_000699085.1

146 calMil1

public

Callorhinchus milii Elephant shark GCF_000165045.1_Callorhinchus_milii-6.1.3 vertebrate_other
147 capCar1 Caprimulgus carolinensis Chuck-will's-widow GCF_000700745.1_ASM70074v1

GCA_000700745.1_ASM70074v1

vertebrate_other

GCA_000700745.1

148 carCri1 Cariama cristata Red-legged seriema GCF_000690535.1_ASM69053v1

GCA_000690535.1_ASM69053v1

vertebrate_other

GCA_000690535.1

149 chaVoc2 Charadrius vociferus Killdeer GCF_000708025.1_ASM70802v2

GCA_000708025.2_ASM70802v2

vertebrate_other

GCA_000708025.2

150 cheMyd1 Chelonia mydas Green seaturtle GCF_000344595.1_CheMyd_1.0 vertebrate_other
151 chlUnd1 Chlamydotis macqueenii Houbara bustard GCF_000695195.1_ASM69519v1

GCA_000695195.1_ASM69519v1

vertebrate_other

GCA_000695195.1

152 colLiv1 Columba livia Rock pigeon GCF_000337935.1_Cliv_1.0 vertebrate_other
153 colStr1 Colius striatus Speckled mousebird GCF_000690715.1_ASM69071v1

GCA_000690715.1_ASM69071v1

vertebrate_other

GCA_000690715.1

154 corBra1 Corvus brachyrhynchos American crow GCF_000691975.1_ASM69197v1

GCA_000691975.1_ASM69197v1

vertebrate_other

GCA_000691975.1

155 cucCan1 Cuculus canorus Common cuckoo GCF_000709325.1_ASM70932v1

GCA_000709325.1_ASM70932v1

vertebrate_other

GCA_000709325.1

156 cynSem1 Cynoglossus semilaevis Tongue sole GCF_000523025.1_Cse_v1.0 vertebrate_other
157 danRer10

public

Danio rerio Zebrafish GCF_000002035.5_GRCz10 vertebrate_other
158 danRer7

public

Danio rerio Zebrafish GCF_000002035.4_Zv9 vertebrate_other
159 egrGar1 Egretta garzetta Little egret GCF_000687185.1_ASM68718v1 vertebrate_other
160 eurHel1 Eurypyga helias Sunbittern GCF_000690775.1_ASM69077v1

GCA_000690775.1_ASM69077v1

vertebrate_other

GCA_000690775.1

161 falChe1 Falco cherrug Saker falcon GCF_000337975.1_F_cherrug_v1.0

GCA_000337975.1_F_cherrug_v1.0

vertebrate_other

GCA_000337975.1

162 falPer1 Falco peregrinus Peregrine falcon GCF_000337955.1_F_peregrinus_v1.0 vertebrate_other
163 ficAlb2 Ficedula albicollis Collared flycatcher GCF_000247815.1_FicAlb1.5

GCA_000247815.2_FicAlb1.5

vertebrate_other

GCA_000247815.2

164 fr3

public

Takifugu rubripes Fugu GCF_000180615.1_FUGU5 vertebrate_other
165 fulGla1 Fulmarus glacialis Northern fulmar GCF_000690835.1_ASM69083v1

GCA_000690835.1_ASM69083v1

vertebrate_other

GCA_000690835.1

166 galGal4

public

Gallus gallus Chicken GCF_000002315.3_Gallus_gallus-4.0 vertebrate_other
167 galGal5 Gallus gallus Chicken GCF_000002315.4_Gallus_gallus-5.0 vertebrate_other
168 gavSte1 Gavia stellata Red-throated loon GCF_000690875.1_ASM69087v1 vertebrate_other
169 gekJap0 Gekko_japonicus Lizards GCF_001447785.1_Gekko_japonicus_V1.1 vertebrate_other
170 geoFor1

public

Geospiza fortis Medium ground finch GCF_000277835.1_GeoFor_1.0

GCA_000277835.1_GeoFor_1.0

vertebrate_other

GCA_000277835.1

171 halAlb1 Haliaeetus albicilla White-tailed eagle GCF_000691405.1_ASM69140v1

GCA_000691405.1_ASM69140v1

vertebrate_other

GCA_000691405.1

172 halLeu1 Haliaeetus leucocephalus Bald eagle GCF_000737465.1_Haliaeetus_leucocephalus-4.0

GCA_000737465.1_Haliaeetus_leucocephalus-4.0

vertebrate_other

GCA_000737465.1

173 latCha1

public

Latimeria chalumnae Coelacanth GCF_000225785.1_LatCha1 vertebrate_other
174 lepDis1 Leptosomus discolor Cuckoo roller GCF_000691785.1_ASM69178v1

GCA_000691785.1_ASM69178v1

vertebrate_other

GCA_000691785.1

175 mayZeb1 Maylandia zebra Zebra mbuna GCF_000238955.1_MetZeb1.1

GCA_000238955.2_MetZeb1.1

vertebrate_other

GCA_000238955.2

176 melUnd1

public

Melopsittacus undulatus Budgerigar GCF_000238935.1_Melopsittacus_undulatus_6.3 vertebrate_other
177 merNub1 Merops nubicus Northern carmine bee-eater GCF_000691845.1_ASM69184v1

GCA_000691845.1_ASM69184v1

vertebrate_other

GCA_000691845.1

178 mesUni1 Mesitornis unicolor Brown roatelo GCF_000695765.1_ASM69576v1

GCA_000695765.1_ASM69576v1

vertebrate_other

GCA_000695765.1

179 nipNip1 Nipponia nippon Crested ibis GCF_000708225.1_ASM70822v1 vertebrate_other
180 notCor1 Notothenia coriiceps Black rockcod GCF_000735185.1_NC01 vertebrate_other
181 opiHoa1 Opisthocomus hoazin Hoatzin GCF_000692075.1_ASM69207v1

GCA_000692075.1_ASM69207v1

vertebrate_other

GCA_000692075.1

182 oreNil2

(has dups: 170) public

Oreochromis niloticus Nile tilapia GCF_000188235.2_Orenil1.1

(has dups: 170)

vertebrate_other
183 pelCri1 Pelecanus crispus Dalmatian pelican GCF_000687375.1_ASM68737v1

GCA_000687375.1_ASM68737v1

vertebrate_other

GCA_000687375.1

184 pelSin1 Pelodiscus sinensis Chinese softshell turtle GCF_000230535.1_PelSin_1.0 vertebrate_other
185 phaCar1 Phalacrocorax carbo Great cormorant GCF_000708925.1_ASM70892v1

GCA_000708925.1_ASM70892v1

vertebrate_other

GCA_000708925.1

186 phaLep1 Phaethon lepturus White-tailed tropicbird GCF_000687285.1_ASM68728v1

GCA_000687285.1_ASM68728v1

vertebrate_other

GCA_000687285.1

187 picPub1 Picoides pubescens Downy woodpecker GCF_000699005.1_ASM69900v1

GCA_000699005.1_ASM69900v1

vertebrate_other

GCA_000699005.1

188 poeFor1 Poecilia formosa Amazon molly GCF_000485575.1_Poecilia_formosa-5.1.2

GCA_000485575.1_Poecilia_formosa-5.1.2

vertebrate_other

GCA_000485575.1

189 pseHum1 Pseudopodoces humilis Tibetan ground jay GCF_000331425.1_PseHum1.0 vertebrate_other
190 pteGut1 Pterocles gutturalis Yellow-throated sandgrouse GCF_000699245.1_ASM69924v1

GCA_000699245.1_ASM69924v1

vertebrate_other

GCA_000699245.1

191 pytBiv0 Python_bivittatus Burmese python GCF_000186305.1_Python_molurus_bivittatus-5.0.2 vertebrate_other
192 pytBiv1 Python bivittatus Burmese python GCF_000186305.1_Python_molurus_bivittatus-5.0.2 vertebrate_other
193 strCam1 Struthio camelus Ostrich GCF_000698965.1_ASM69896v1 vertebrate_other
194 taeGut2

public

Taeniopygia guttata Zebra finch GCF_000151805.1_Taeniopygia_guttata-3.2.4 vertebrate_other
195 tauEry1 Tauraco erythrolophus Red crested turaco GCF_000709365.1_ASM70936v1

GCA_000709365.1_ASM70936v1

vertebrate_other

GCA_000709365.1

196 thaSir0 Thamnophis_sirtalis Snakes GCF_001077635.1_Thamnophis_sirtalis-6.0

GCA_001077635.2_Thamnophis_sirtalis-6.0

vertebrate_other

GCA_001077635.2

197 tinGut2 Tinamus guttatus White throated tinamou GCF_000705375.1_ASM70537v2

GCA_000705375.2_ASM70537v2

vertebrate_other

GCA_000705375.2

198 tytAlb1 Tyto alba Barn owl GCF_000687205.1_ASM68720v1

GCA_000687205.1_ASM68720v1

vertebrate_other

GCA_000687205.1

199 xenTro7

public

Xenopus Silurana tropicalis X. tropicalis GCF_000004195.2_Xtropicalis_v7 vertebrate_other
200 xenTro7

public

Xenopus tropicalis X. tropicalis GCF_000004195.2_Xtropicalis_v7 vertebrate_other
201 xipMac1 Xiphophorus maculatus Southern platyfish GCF_000241075.1_Xiphophorus_maculatus-4.4.2 vertebrate_other
202 zonAlb1 Zonotrichia albicollis White-throated sparrow GCF_000385455.1_Zonotrichia_albicollis-1.0.1

GCA_000385455.1_Zonotrichia_albicollis-1.0.1

vertebrate_other

GCA_000385455.1

203 punNye1

(subset: 7233 of 7233)

Pundamilia nyererei Pundamilia nyererei GCF_000239375.1_PunNye1.0

(has dups: 3)

vertebrate_other
204 neoBri1

(subset: 9083 of 9083)

Neolamprologus brichardi Princess of Burundi GCF_000239395.1_NeoBri1.0

(has dups: 16)

vertebrate_other
205 hapBur1

(subset: 7994 of 7994)

Haplochromis burtoni Burton's mouthbreeder GCF_000239415.1_AstBur1.0

(has dups: 7)

vertebrate_other
206 lepOcu1

(subset: 1925 of 1925)

Lepisosteus oculatus Spotted gar GCF_000242695.1_LepOcu1

(has dups: 1)

vertebrate_other
207 serCan1

(subset: 304397 of 304397)

Serinus canaria Canary GCF_000534875.1_SCA1

(has dups: 3)

vertebrate_other
208 stePar1

(subset: 5817 of 5817)

Stegastes partitus Bicolor damselfish GCF_000690725.1_Stegastes_partitus-1.0.2

(has dups: 1)

vertebrate_other
209 pygAde1

(subset: 19264 of 19265)

Pygoscelis adeliae Adelie penguin GCF_000699105.1_ASM69910v1

GCA_000699105.1_ASM69910v1

vertebrate_other

GCA_000699105.1

210 esoLuc1

(subset: 5325 of 5326)

Esox lucius Northern pike GCF_000721915.1_EsoLuc1.0

GCA_000721915.1_EsoLuc1.0

vertebrate_other

GCA_000721915.1

211 cypVar1

(subset: 9258 of 9259)

Cyprinodon variegatus Sheepshead minnow GCF_000732505.1_C_variegatus-1.0

GCA_000732505.1_C_variegatus-1.0

vertebrate_other

GCA_000732505.1

212 corCor1

(subset: 1298 of 1299)

Corvus cornix Hooded crow GCF_000738735.1_Hooded_Crow_genome vertebrate_other
213 aquChr2

(subset: 1141 of 1142)

Aquila chrysaetos Golden eagle GCF_000766835.1_Aquila_chrysaetos-1.0.2

GCA_000766835.1_Aquila_chrysaetos-1.0.2

vertebrate_other

GCA_000766835.1

214 astMex1 Astyanax mexicanus Mexican tetra (cavefish) GCF_000372685.1_Astyanax_mexicanus-1.0.2

(subset: 10735 of 10736)

vertebrate_other
215 manVit1 Manacus vitellinus Golden-collared manakin GCF_000692015.1_ASM69201v2

(subset: 92755 of 92789)

vertebrate_other
216 acaChl1 Acanthisitta chloris Rifleman GCF_000695815.1_ASM69581v1

(subset: 53875 of 53876)

vertebrate_other
217 melGal1

(near match: 5890 of 5891) public

Meleagris gallopavo Turkey GCF_000146605.1_Turkey_2.01 vertebrate_other
218 chrPic2

(near match: 78594 of 78595)

Chrysemys picta Painted turtle GCF_000241765.3_Chrysemys_picta_bellii-3.0.3 vertebrate_other
219 poeRet1

(near match: 2766 of 2767)

Poecilia reticulata Guppy GCF_000633615.1_Guppy_female_1.0_MT

(has dups: 1)

vertebrate_other
220 notFound Larimichthys_crocea Large yellow croaker GCF_000742935.1_ASM74293v1

(10266 sequences)

vertebrate_other
221 notFound Poecilia_mexicana Shortfin molly GCF_001443325.1_P_mexicana-1.0

(has dups: 3) (18105 sequences)

vertebrate_other
222 notFound Esox_lucius Northern pike GCF_000721915.2_ASM72191v2

(1520 sequences)

vertebrate_other
223 notFound Calidris_pugnax Ruff GCF_001431845.1_ASM143184v1

(3753 sequences)

vertebrate_other
224 notFound Anser cygnoides domesticus notFound GCF_000971095.1_AnsCyg_PRJNA183603_v1.0

(0 sequences)

vertebrate_other
225 notFound Poecilia_latipinna Sailfin molly GCF_001443285.1_P_latipinna-1.0

(has dups: 2) (17988 sequences)

vertebrate_other
226 notFound Sinocyclocheilus_rhinocerous Bony fishes GCF_001515625.1_SAMN03320098_v1.1

(has dups: 1) (164173 sequences)

vertebrate_other
227 notFound Oryzias_latipes Japanese medaka GCF_000313675.1_ASM31367v1

(7189 sequences)

vertebrate_other
228 notFound Ictalurus_punctatus Channel catfish GCF_001660625.1_IpCoco_1.2

(9341 sequences)

vertebrate_other
229 notFound Salmo_salar Atlantic salmon GCF_000233375.1_ICSASG_v2

(has dups: 3) (232155 sequences)

vertebrate_other
230 notFound Austrofundulus_limnaeus Bony fishes GCF_001266775.1_Austrofundulus_limnaeus-1.0

(has dups: 1) (29785 sequences)

vertebrate_other
231 notFound Nothobranchius_furzeri Turquoise killifish GCF_001465895.1_Nfu_20140520

(5897 sequences)

vertebrate_other
232 notFound Kryptolebias_marmoratus Mangrove rivulus GCF_001649575.1_ASM164957v1

(3073 sequences)

vertebrate_other
233 notFound Sturnus_vulgaris Common starling GCF_001447265.1_Sturnus_vulgaris-1.0

(2361 sequences)

vertebrate_other
234 notFound Maylandia_zebra Zebra mbuna GCF_000238955.2_M_zebra_UMD1

(3555 sequences)

vertebrate_other
235 notFound Chaetura_pelagica Chimney swift GCF_000747805.1_ChaPel_1.0

(19072 sequences)

vertebrate_other
236 notFound Coturnix_japonica Japanese quail GCF_001577835.1_Coturnix_japonica_2.0

(2012 sequences)

vertebrate_other
237 notFound Balearica regulorum gibbericeps notFound GCF_000709895.1_ASM70989v1

(0 sequences)

vertebrate_other
238 notFound Parus_major Great Tit GCF_001522545.1_Parus_major1.0.3

(1676 sequences)

vertebrate_other
239 notFound Fundulus_heteroclitus Mummichog GCF_000826765.1_Fundulus_heteroclitus-3.0.2

(10180 sequences)

vertebrate_other
240 notFound Sinocyclocheilus_grahami Bony fishes GCF_001515645.1_SAMN03320097.WGS_v1.1

(31277 sequences)

vertebrate_other
241 notFound Protobothrops_mucrosquamatus Snakes GCF_001527695.1_P.Mucros_1.0

(52281 sequences)

vertebrate_other
242 notFound Clupea_harengus Atlantic herring GCF_000966335.1_ASM96633v1

(6915 sequences)

vertebrate_other
243 notFound Sinocyclocheilus_anshuiensis Bony fishes GCF_001515605.1_SAMN03320099.WGS_v1.1

(85682 sequences)

vertebrate_other
244 notFound Alligator_mississippiensis American alligator GCF_000281125.2_ASM28112v3

(9857 sequences)

vertebrate_other
245 notFound Nestor_notabilis Kea GCF_000696875.1_ASM69687v1

(42180 sequences)

vertebrate_other
246 notFound Apteryx australis mantelli notFound GCF_001039765.1_AptMant0

(0 sequences)

vertebrate_other
247 notFound Meleagris_gallopavo Turkey GCF_000146605.2_Turkey_5.0

(231286 sequences)

vertebrate_other
248 amaVit1 Amazona vittata Parrot (no refseq)

GCA_000332375.1_AV1

vertebrate_other

GCA_000332375.1

249 apaSpi1 Apalone spinifera Spiny softshell turtle (no refseq)

GCA_000385615.1_ASM38561v1

vertebrate_other

GCA_000385615.1

250 araMac1 Ara macao Scarlet macaw (no refseq)

GCA_000400695.1_SMACv1.1

vertebrate_other

GCA_000400695.1

251 dicLab1 Dicentrarchus labrax European sea bass (no refseq)

GCA_000689215.1_seabass_V1.0

vertebrate_other

GCA_000689215.1

252 nanPar1 Nanorana parkeri Tibetan frog (no refseq)

GCA_000935625.1_ASM93562v1

vertebrate_other

GCA_000935625.1

253 sebNig1 Sebastes nigrocinctus Tiger rockfish (no refseq)

GCA_000475235.1_Snig1.0

vertebrate_other

GCA_000475235.1

254 sebRub1 Sebastes rubrivinctus Flag rockfish (no refseq)

GCA_000475215.1_SRub1.0

vertebrate_other

GCA_000475215.1

255 acrEch0 Acromyrmex_echinatior Panamanian leafcutter ant GCF_000204515.1_Aech_3.9

GCA_000204515.1_Aech_3.9

invertebrate

GCA_000204515.1

256 apiMel4 Apis mellifera A. mellifera GCF_000002195.4_Amel_4.5 invertebrate
257 attCep0 Atta_cephalotes Ants GCF_000143395.1_Attacep1.0 invertebrate
258 caeRem4 Caenorhabditis remanei C. remanei GCF_000149515.1_ASM14951v1

GCA_000149515.1_ASM14951v1

invertebrate

GCA_000149515.1

259 camFlo0 Camponotus_floridanus Florida carpenter ant GCF_000147175.1_CamFlo_1.0

GCA_000147175.1_CamFlo_1.0

invertebrate

GCA_000147175.1

260 ce11

public

Caenorhabditis elegans C. elegans GCF_000002985.6_WBcel235 invertebrate
261 cerBir0 Cerapachys_biroi Clonal raider ant GCF_000611835.1_CerBir1.0

GCA_000611835.1_CerBir1.0

invertebrate

GCA_000611835.1

262 ci3 Ciona intestinalis C. intestinalis GCF_000224145.1_KH invertebrate
263 dm6

public

Drosophila melanogaster D. melanogaster GCF_000001215.4_Release_6_plus_ISO1_MT

GCA_000001215.4_Release_6_plus_ISO1_MT

invertebrate

GCA_000001215.4

264 droAna3

(has dups: 2)

Drosophila ananassae D. ananassae GCF_000005115.1_dana_caf1

(has dups: 2) GCA_000005115.1_dana_caf1

invertebrate

GCA_000005115.1

265 droBia2 Drosophila biarmipes D. biarmipes GCF_000233415.1_Dbia_2.0

GCA_000233415.2_Dbia_2.0

invertebrate

GCA_000233415.2

266 droBip2 Drosophila bipectinata D. bipectinata GCF_000236285.1_Dbip_2.0

GCA_000236285.2_Dbip_2.0

invertebrate

GCA_000236285.2

267 droEle2 Drosophila elegans D. elegans GCF_000224195.1_Dele_2.0

GCA_000224195.2_Dele_2.0

invertebrate

GCA_000224195.2

268 droEre2 Drosophila erecta D. erecta GCF_000005135.1_dere_caf1

GCA_000005135.1_dere_caf1

invertebrate

GCA_000005135.1

269 droEug2 Drosophila eugracilis D. eugracilis GCF_000236325.1_Deug_2.0

GCA_000236325.2_Deug_2.0

invertebrate

GCA_000236325.2

270 droFic2 Drosophila ficusphila D. ficusphila GCF_000220665.1_Dfic_2.0

GCA_000220665.2_Dfic_2.0

invertebrate

GCA_000220665.2

271 droGri2 Drosophila grimshawi D. grimshawi GCF_000005155.2_dgri_caf1

GCA_000005155.1_dgri_caf1

invertebrate

GCA_000005155.1

272 droKik2 Drosophila kikkawai D. kikkawai GCF_000224215.1_Dkik_2.0

GCA_000224215.2_Dkik_2.0

invertebrate

GCA_000224215.2

273 droMir2 Drosophila miranda D. miranda GCF_000269505.1_DroMir_2.2

GCA_000269505.2_DroMir_2.2

invertebrate

GCA_000269505.2

274 droMoj3 Drosophila mojavensis D. mojavensis GCF_000005175.2_dmoj_caf1

GCA_000005175.1_dmoj_caf1

invertebrate

GCA_000005175.1

275 droPer1

public

Drosophila persimilis D. persimilis GCF_000005195.2_dper_caf1

GCA_000005195.1_dper_caf1

invertebrate

GCA_000005195.1

276 droRho2 Drosophila rhopaloa D. rhopaloa GCF_000236305.1_Drho_2.0

GCA_000236305.2_Drho_2.0

invertebrate

GCA_000236305.2

277 droSuz1 Drosophila suzukii D. suzukii GCF_000472105.1_Dsuzukii.v01

GCA_000472105.1_Dsuzukii.v01

invertebrate

GCA_000472105.1

278 droTak2 Drosophila takahashii D. takahashii GCF_000224235.1_Dtak_2.0

GCA_000224235.2_Dtak_2.0

invertebrate

GCA_000224235.2

279 droVir3

(has dups: 1)

Drosophila virilis D. virilis GCF_000005245.1_dvir_caf1

(has dups: 1) GCA_000005245.1_dvir_caf1

invertebrate

GCA_000005245.1

280 droWil2 Drosophila willistoni D. willistoni GCF_000005925.1_dwil_caf1

GCA_000005925.1_dwil_caf1

invertebrate

GCA_000005925.1

281 droYak3 Drosophila yakuba D. yakuba GCF_000005975.2_dyak_caf1 invertebrate
282 harSal0 Harpegnathos_saltator Jerdon's jumping ant GCF_000147195.1_HarSal_1.0

GCA_000147195.1_HarSal_1.0

invertebrate

GCA_000147195.1

283 linHum0

(has dups: 1)

Linepithema_humile Argentine ant GCF_000217595.1_Lhum_UMD_V04

(has dups: 1) GCA_000217595.1_Lhum_UMD_V04

invertebrate

GCA_000217595.1

284 lotGig0 Lottia gigantea Limpet GCF_000327385.1_Helro1

GCA_000327385.1_Helro1

invertebrate

GCA_000327385.1

285 pogBar0 Pogonomyrmex_barbatus Red harvester ant GCF_000187915.1_Pbar_UMD_V03

GCA_000187915.1_Pbar_UMD_V03

invertebrate

GCA_000187915.1

286 solInv0 Solenopsis_invicta Red fire ant GCF_000188075.1_Si_gnG invertebrate
287 strPur4

(has dups: 1)

Strongylocentrotus purpuratus S. purpuratus GCF_000002235.3_Spur_3.1

(has dups: 1)

invertebrate
288 ancCey1 notFound A. ceylanicum (no refseq)

GCA_000688135.1_Acey_2013.11.30.genDNA

invertebrate

GCA_000688135.1

289 aplCal0 notFound Sea hare (no refseq)

GCA_000002075.2_AplCal3.0

invertebrate

GCA_000002075.2

290 bioGla0 notFound Snail (no refseq)

GCA_000457365.1_ASM45736v1

invertebrate

GCA_000457365.1

291 caeAng1 notFound C. angaria (no refseq)

GCA_000165025.1_ps1010rel4

invertebrate

GCA_000165025.1

292 caeJap4 notFound C. japonica (no refseq)

GCA_000147155.1_C_japonica-7.0.1

invertebrate

GCA_000147155.1

293 caePb3 notFound C. brenneri (no refseq)

GCA_000143925.2_C_brenneri-6.0.1b

invertebrate

GCA_000143925.2

294 caeSp111 notFound C. tropicalis (no refseq)

GCA_000186765.1_Caenorhabditis_sp11_JU1373-3.0.1

invertebrate

GCA_000186765.1

295 ci1

public

notFound C. intestinalis (no refseq)

GCA_000183065.1_v1.0

invertebrate

GCA_000183065.1

296 droAlb1 notFound D. albomicans (no refseq)

GCA_000298335.1_DroAlb_1.0

invertebrate

GCA_000298335.1

297 droSec1

public

notFound D. sechellia (no refseq)

GCA_000005215.1_dsec_caf1

invertebrate

GCA_000005215.1

298 melInc1 notFound M. incognita (no refseq)

GCA_000180415.1_ASM18041v1

invertebrate

GCA_000180415.1

299 priPac2 notFound P. pacificus (no refseq)

GCA_000180635.1_ASM18063v1

invertebrate

GCA_000180635.1

300 strRat2 notFound Threadworm (no refseq)

GCA_001040885.1_S_ratti_ED321

invertebrate

GCA_001040885.1

301 araTha1 Arabidopsis_thaliana Thale cress GCF_000001735.3_TAIR10 plant
302 ricCom1 Ricinus_communis Castor bean GCF_000151685.1_JCVI_RCG_1.1

GCA_000151685.2_JCVI_RCG_1.1

plant

GCA_000151685.2

303 bunEbo1 Bundibugyo virus Bundibugyo ebolavirus GCF_000889155.1_ViralProj51245 viral
304 resEbo1 Reston ebolavirus Reston ebolavirus GCF_000854085.1_ViralProj15006 viral
305 sudEbo1 Sudan ebolavirus Sudan ebolavirus GCF_000855585.1_ViralProj15012 viral
306 taiEbo1 Tai Forest ebolavirus Tai forest ebolavirus GCF_000888475.1_ViralProj51257 viral
307 zaiEbo1 Zaire ebolavirus Zaire ebolavirus GCF_000848505.1_ViralProj14703 viral
308 sacCer3

public

Saccharomyces cerevisiae S. cerevisiae GCF_000146045.2_R64 fungi

Found 269 matched test browser assemblies from a total of 504 assemblies on the test browser.

Found 82 matched public genome browser assemblies from a total of 176 assemblies on the public genome browser server.

  • vertebrate_mammalian matched 99 assemblies from a total of 125
  • vertebrate_other matched 87 assemblies from a total of 109
  • fungi matched 1 assemblies from a total of 213
  • plant matched 2 assemblies from a total of 86
  • viral matched 5 assemblies from a total of 6092
  • invertebrate matched 46 assemblies from a total of 121
Retrieved from "https://genomewiki.ucsc.edu/index.php?title=UCSC_to_RefSeq_correspondence&oldid=23373"