Hg18 44way alignment: Difference between revisions

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m (add link to size stats)
(updated table)
Line 29: Line 29:
   <TD>Human</TD>
   <TD>Human</TD>
   <TD>Mar.&nbsp;2006</TD>
   <TD>Mar.&nbsp;2006</TD>
   <TD>NCBI&nbsp;Build&nbsp;36.1</TD>
   <TD>NCBI Build 36.1</TD>
   <TD>2005-12-09</TD>
   <TD>2005-12-09</TD>
   <TD>2006-12-05</TD>
   <TD>2006-12-05</TD>
Line 40: Line 40:
   <TD>Chimp</TD>
   <TD>Chimp</TD>
   <TD>Mar.&nbsp;2006</TD>
   <TD>Mar.&nbsp;2006</TD>
   <TD>Washington&nbsp;University&nbsp;Build&nbsp;2&nbsp;Version&nbsp;1</TD>
   <TD>Washington University Build 2 Version 1</TD>
   <TD>2006-03-24</TD>
   <TD>2006-03-24</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 62: Line 62:
   <TD>Orangutan</TD>
   <TD>Orangutan</TD>
   <TD>July&nbsp;2007</TD>
   <TD>July&nbsp;2007</TD>
   <TD>WUSTL&nbsp;3.0</TD>
   <TD>WUSTL 3.0</TD>
   <TD>2007-09-15</TD>
   <TD>2007-09-15</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 73: Line 73:
   <TD>Rhesus</TD>
   <TD>Rhesus</TD>
   <TD>Jan.&nbsp;2006</TD>
   <TD>Jan.&nbsp;2006</TD>
   <TD>Venter&nbsp;Inst./Baylor/WashU&nbsp;Merged&nbsp;assembly&nbsp;Jan&nbsp;2006&nbsp;v1&nbsp;edit4</TD>
   <TD>Venter Inst./Baylor/WashU Merged assembly Jan 2006 v1 edit4</TD>
   <TD>2006-01-30</TD>
   <TD>2006-01-30</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 84: Line 84:
   <TD>Marmoset</TD>
   <TD>Marmoset</TD>
   <TD>June&nbsp;2007</TD>
   <TD>June&nbsp;2007</TD>
   <TD>WUSTL&nbsp;2.0.2</TD>
   <TD>WUSTL 2.0.2</TD>
   <TD>2007-08-23</TD>
   <TD>2007-08-23</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 95: Line 95:
   <TD>Tarsier</TD>
   <TD>Tarsier</TD>
   <TD>Aug.&nbsp;2008</TD>
   <TD>Aug.&nbsp;2008</TD>
   <TD>Broad&nbsp;Institute&nbsp;tarSyr1</TD>
   <TD>Broad Institute tarSyr1</TD>
   <TD>N/A</TD>
   <TD>2008-10-15</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
   <TD>2008-07-28</TD>
   <TD>2008-07-28</TD>
Line 106: Line 106:
   <TD>Bushbaby</TD>
   <TD>Bushbaby</TD>
   <TD>Dec.&nbsp;2006</TD>
   <TD>Dec.&nbsp;2006</TD>
   <TD>Broad&nbsp;version&nbsp;1</TD>
   <TD>Broad version 1</TD>
   <TD>2006-12-20</TD>
   <TD>2006-12-20</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 117: Line 117:
   <TD>Mouse&nbsp;lemur</TD>
   <TD>Mouse&nbsp;lemur</TD>
   <TD>Jun.&nbsp;2003</TD>
   <TD>Jun.&nbsp;2003</TD>
   <TD>Broad&nbsp;Institute&nbsp;micMur1</TD>
   <TD>Broad Institute micMur1</TD>
   <TD>2008-08-03</TD>
   <TD>2008-08-03</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 128: Line 128:
   <TD>TreeShrew</TD>
   <TD>TreeShrew</TD>
   <TD>Dec.&nbsp;2006</TD>
   <TD>Dec.&nbsp;2006</TD>
   <TD>Broad&nbsp;version&nbsp;1</TD>
   <TD>Broad version 1</TD>
   <TD>N/A</TD>
   <TD>2008-10-15</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
   <TD>2006-12-20</TD>
   <TD>2006-12-20</TD>
Line 139: Line 139:
   <TD>Mouse</TD>
   <TD>Mouse</TD>
   <TD>July&nbsp;2007</TD>
   <TD>July&nbsp;2007</TD>
   <TD>NCBI&nbsp;Build&nbsp;37</TD>
   <TD>NCBI Build 37</TD>
   <TD>2007-07-20</TD>
   <TD>2007-07-20</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 150: Line 150:
   <TD>Rat</TD>
   <TD>Rat</TD>
   <TD>Nov.&nbsp;2004</TD>
   <TD>Nov.&nbsp;2004</TD>
   <TD>Baylor&nbsp;HGSC&nbsp;v.&nbsp;3.4</TD>
   <TD>Baylor HGSC v. 3.4</TD>
   <TD>2006-03-16</TD>
   <TD>2006-03-16</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 161: Line 161:
   <TD>Kangaroo&nbsp;rat</TD>
   <TD>Kangaroo&nbsp;rat</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Broad&nbsp;Institute</TD>
   <TD>Broad Institute</TD>
   <TD>N/A</TD>
   <TD>2008-10-15</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
   <TD>2008-07-28</TD>
   <TD>2008-07-28</TD>
Line 172: Line 172:
   <TD>Guinea&nbsp;Pig</TD>
   <TD>Guinea&nbsp;Pig</TD>
   <TD>Feb.&nbsp;2008</TD>
   <TD>Feb.&nbsp;2008</TD>
   <TD>Broad&nbsp;Institute&nbsp;cavPor3</TD>
   <TD>Broad Institute cavPor3</TD>
   <TD>2008-04-05</TD>
   <TD>2008-04-05</TD>
   <TD>2008-04-08</TD>
   <TD>2008-04-08</TD>
Line 183: Line 183:
   <TD>Squirrel</TD>
   <TD>Squirrel</TD>
   <TD>Feb.&nbsp;2008</TD>
   <TD>Feb.&nbsp;2008</TD>
   <TD>Broad&nbsp;Institute&nbsp;speTri1</TD>
   <TD>Broad Institute speTri1</TD>
   <TD>2008-08-03</TD>
   <TD>2008-08-03</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 194: Line 194:
   <TD>Rabbit</TD>
   <TD>Rabbit</TD>
   <TD>May&nbsp;2005</TD>
   <TD>May&nbsp;2005</TD>
   <TD>Broad&nbsp;May&nbsp;2005</TD>
   <TD>Broad May 2005</TD>
   <TD>2005-05-22</TD>
   <TD>2005-05-22</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 205: Line 205:
   <TD>Pika</TD>
   <TD>Pika</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Broad&nbsp;Institute&nbsp;ochPri2</TD>
   <TD>Broad Institute ochPri2</TD>
   <TD>2008-07-28</TD>
   <TD>2008-07-28</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 216: Line 216:
   <TD>Shrew</TD>
   <TD>Shrew</TD>
   <TD>June&nbsp;2006</TD>
   <TD>June&nbsp;2006</TD>
   <TD>Broad&nbsp;Institute&nbsp;sorAra&nbsp;(Draft_v2)</TD>
   <TD>Broad Institute sorAra (Draft_v2)</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 227: Line 227:
   <TD>Hedgehog</TD>
   <TD>Hedgehog</TD>
   <TD>June&nbsp;2006</TD>
   <TD>June&nbsp;2006</TD>
   <TD>Broad&nbsp;Institute&nbsp;eriEur1&nbsp;(Draft_v1)</TD>
   <TD>Broad Institute eriEur1 (Draft_v1)</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 238: Line 238:
   <TD>Cat</TD>
   <TD>Cat</TD>
   <TD>Mar.&nbsp;2006</TD>
   <TD>Mar.&nbsp;2006</TD>
   <TD>Broad&nbsp;Release&nbsp;3</TD>
   <TD>Broad Release 3</TD>
   <TD>2006-10-16</TD>
   <TD>2006-10-16</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 249: Line 249:
   <TD>Dog</TD>
   <TD>Dog</TD>
   <TD>May&nbsp;2005</TD>
   <TD>May&nbsp;2005</TD>
   <TD>Broad&nbsp;Institute&nbsp;v.&nbsp;2.0</TD>
   <TD>Broad Institute v. 2.0</TD>
   <TD>2005-07-10</TD>
   <TD>2005-07-10</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 260: Line 260:
   <TD>Horse</TD>
   <TD>Horse</TD>
   <TD>Sep.&nbsp;2007</TD>
   <TD>Sep.&nbsp;2007</TD>
   <TD>Broad&nbsp;Institute&nbsp;EquCab2</TD>
   <TD>Broad Institute EquCab2</TD>
   <TD>2008-04-03</TD>
   <TD>2008-04-03</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 271: Line 271:
   <TD>Megabat</TD>
   <TD>Megabat</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Broad&nbsp;Institute&nbsp;pteVam1</TD>
   <TD>Broad Institute pteVam1</TD>
   <TD>N/A</TD>
   <TD>2008-10-15</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
   <TD>2008-07-13</TD>
   <TD>2008-07-13</TD>
Line 282: Line 282:
   <TD>Microbat</TD>
   <TD>Microbat</TD>
   <TD>Mar.&nbsp;2006</TD>
   <TD>Mar.&nbsp;2006</TD>
   <TD>Broad&nbsp;Institute&nbsp;myoLuc1</TD>
   <TD>Broad Institute myoLuc1</TD>
   <TD>2008-07-29</TD>
   <TD>2008-07-29</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 293: Line 293:
   <TD>Dolphin</TD>
   <TD>Dolphin</TD>
   <TD>Feb.&nbsp;2008</TD>
   <TD>Feb.&nbsp;2008</TD>
   <TD>Broad&nbsp;Institute&nbsp;turTru1</TD>
   <TD>Broad Institute turTru1</TD>
   <TD>N/A</TD>
   <TD>2008-10-15</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
   <TD>2008-07-12</TD>
   <TD>2008-07-12</TD>
Line 304: Line 304:
   <TD>Cow</TD>
   <TD>Cow</TD>
   <TD>Oct.&nbsp;2007</TD>
   <TD>Oct.&nbsp;2007</TD>
   <TD>Baylor&nbsp;Release&nbsp;4.0</TD>
   <TD>Baylor Release 4.0</TD>
   <TD>2008-03-10</TD>
   <TD>2008-03-10</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 315: Line 315:
   <TD>Alpaca</TD>
   <TD>Alpaca</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Broad&nbsp;Institute&nbsp;vicPac1</TD>
   <TD>Broad Institute vicPac1</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 326: Line 326:
   <TD>Armadillo</TD>
   <TD>Armadillo</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Broad&nbsp;Institute&nbsp;dasNov2</TD>
   <TD>Broad Institute dasNov2</TD>
   <TD>2008-10-07</TD>
   <TD>2008-10-07</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 337: Line 337:
   <TD>Sloth</TD>
   <TD>Sloth</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Broad&nbsp;Institute&nbsp;choHof1</TD>
   <TD>Broad Institute choHof1</TD>
   <TD>N/A</TD>
   <TD>2008-10-16</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
   <TD>2008-08-05</TD>
   <TD>2008-08-05</TD>
Line 348: Line 348:
   <TD>Tenrec</TD>
   <TD>Tenrec</TD>
   <TD>July&nbsp;2005</TD>
   <TD>July&nbsp;2005</TD>
   <TD>Broad&nbsp;July&nbsp;2005</TD>
   <TD>Broad July 2005</TD>
   <TD>2005-08-04</TD>
   <TD>2005-08-04</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 359: Line 359:
   <TD>Elephant</TD>
   <TD>Elephant</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Broad&nbsp;Institute&nbsp;loxAfr2</TD>
   <TD>Broad Institute loxAfr2</TD>
   <TD>2008-10-07</TD>
   <TD>2008-10-07</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 370: Line 370:
   <TD>Rock&nbsp;hyrax</TD>
   <TD>Rock&nbsp;hyrax</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Broad&nbsp;Institute&nbsp;proCap1</TD>
   <TD>Broad Institute proCap1</TD>
   <TD>N/A</TD>
   <TD>2008-10-16</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
   <TD>2008-08-01</TD>
   <TD>2008-08-01</TD>
Line 381: Line 381:
   <TD>Opossum</TD>
   <TD>Opossum</TD>
   <TD>Jan.&nbsp;2006</TD>
   <TD>Jan.&nbsp;2006</TD>
   <TD>Broad&nbsp;Inst.&nbsp;monDom4&nbsp;Jan06</TD>
   <TD>Broad Inst. monDom4 Jan06</TD>
   <TD>2006-02-10</TD>
   <TD>2006-02-10</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 392: Line 392:
   <TD>Platypus</TD>
   <TD>Platypus</TD>
   <TD>Mar.&nbsp;2007</TD>
   <TD>Mar.&nbsp;2007</TD>
   <TD>WUSTL&nbsp;version&nbsp;5.0.1</TD>
   <TD>WUSTL version 5.0.1</TD>
   <TD>2007-07-20</TD>
   <TD>2007-07-20</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 403: Line 403:
   <TD>Chicken</TD>
   <TD>Chicken</TD>
   <TD>May&nbsp;2006</TD>
   <TD>May&nbsp;2006</TD>
   <TD>Chicken&nbsp;Genome&nbsp;Sequencing&nbsp;Consortium&nbsp;May&nbsp;2006&nbsp;release</TD>
   <TD>Chicken Genome Sequencing Consortium May 2006 release</TD>
   <TD>2006-05-18</TD>
   <TD>2006-05-18</TD>
   <TD>2007-01-02</TD>
   <TD>2007-01-02</TD>
Line 414: Line 414:
   <TD>Zebra&nbsp;finch</TD>
   <TD>Zebra&nbsp;finch</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Jul.&nbsp;2008</TD>
   <TD>Washington&nbsp;University&nbsp;taeGut1</TD>
   <TD>Washington University taeGut1</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
   <TD>2008-08-05</TD>
   <TD>2008-08-05</TD>
Line 425: Line 425:
   <TD>Lizard</TD>
   <TD>Lizard</TD>
   <TD>Feb.&nbsp;2007</TD>
   <TD>Feb.&nbsp;2007</TD>
   <TD>Broad&nbsp;Institute&nbsp;AnoCar&nbsp;(1.0)</TD>
   <TD>Broad Institute AnoCar (1.0)</TD>
   <TD>2007-03-07</TD>
   <TD>2007-03-07</TD>
   <TD>2007-02-16</TD>
   <TD>2007-02-16</TD>
Line 436: Line 436:
   <TD>X.&nbsp;tropicalis</TD>
   <TD>X.&nbsp;tropicalis</TD>
   <TD>Aug.&nbsp;2005</TD>
   <TD>Aug.&nbsp;2005</TD>
   <TD>JGI&nbsp;v4.1</TD>
   <TD>JGI v4.1</TD>
   <TD>2006-04-17</TD>
   <TD>2006-04-17</TD>
   <TD>2007-02-20</TD>
   <TD>2007-02-20</TD>
Line 447: Line 447:
   <TD>Zebrafish</TD>
   <TD>Zebrafish</TD>
   <TD>July&nbsp;2007</TD>
   <TD>July&nbsp;2007</TD>
   <TD>Wellcome&nbsp;Trust&nbsp;Sanger&nbsp;Institute,&nbsp;Zv7&nbsp;assembly</TD>
   <TD>Wellcome Trust Sanger Institute, Zv7 assembly</TD>
   <TD>2007-09-05</TD>
   <TD>2007-09-05</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
Line 458: Line 458:
   <TD>Tetraodon</TD>
   <TD>Tetraodon</TD>
   <TD>Feb.&nbsp;2004</TD>
   <TD>Feb.&nbsp;2004</TD>
   <TD>Genoscope&nbsp;and&nbsp;Broad&nbsp;Institute,&nbsp;V7</TD>
   <TD>Genoscope and Broad Institute, V7</TD>
   <TD>2004-08-17</TD>
   <TD>2004-08-17</TD>
   <TD>2006-12-05</TD>
   <TD>2006-12-05</TD>
Line 469: Line 469:
   <TD>Fugu</TD>
   <TD>Fugu</TD>
   <TD>Oct.&nbsp;2004</TD>
   <TD>Oct.&nbsp;2004</TD>
   <TD>JGI&nbsp;V4.0</TD>
   <TD>JGI V4.0</TD>
   <TD>2007-03-07</TD>
   <TD>2007-03-07</TD>
   <TD>2007-01-22</TD>
   <TD>2007-01-22</TD>
Line 480: Line 480:
   <TD>Stickleback</TD>
   <TD>Stickleback</TD>
   <TD>Feb.&nbsp;2006</TD>
   <TD>Feb.&nbsp;2006</TD>
   <TD>Broad&nbsp;Institute&nbsp;gasAcu1&nbsp;(1.0)</TD>
   <TD>Broad Institute gasAcu1 (1.0)</TD>
   <TD>2006-10-17</TD>
   <TD>2006-10-17</TD>
   <TD>2006-12-05</TD>
   <TD>2006-12-05</TD>
Line 502: Line 502:
   <TD>Lamprey</TD>
   <TD>Lamprey</TD>
   <TD>Mar.&nbsp;2007</TD>
   <TD>Mar.&nbsp;2007</TD>
   <TD>WUSTL&nbsp;v.3.0&nbsp;(March&nbsp;2007)</TD>
   <TD>WUSTL v.3.0 (March 2007)</TD>
   <TD>N/A</TD>
   <TD>N/A</TD>
   <TD>2008-01-28</TD>
   <TD>2008-01-28</TD>

Revision as of 19:47, 17 October 2008

see also

Genome size statistics

sanity

The table below needs to be examined for sanity. The "chain on hg18" date should be after the masking date. It appears some do not match that criteria. When all the chain tables exist, that is a good sign that the multiple alignment can be done.

do not edit

This table is automatically generated off-line from the UCSC databases. Please do not edit it.

  UCSC
db name		 Scientific
name		 Common
name		 assembly
date		 source
version		 RepeatMasker WindowMasker chain
on hg18
01 hg18 Homo
sapiens		 Human Mar. 2006 NCBI Build 36.1 2005-12-09 2006-12-05 N/A
02 panTro2 Pan
troglodytes		 Chimp Mar. 2006 Washington University Build 2 Version 1 2006-03-24 N/A 2006-07-15
03 gorGor1 N/A N/A N/A N/A N/A N/A N/A
04 ponAbe2 Pongo
pygmaeus
abelii		 Orangutan July 2007 WUSTL 3.0 2007-09-15 N/A 2007-10-03
05 rheMac2 Macaca
mulatta		 Rhesus Jan. 2006 Venter Inst./Baylor/WashU Merged assembly Jan 2006 v1 edit4 2006-01-30 N/A 2006-03-17
06 calJac1 Callithrix
jacchus		 Marmoset June 2007 WUSTL 2.0.2 2007-08-23 N/A 2007-11-13
07 tarSyr1 Tarsier
syrichta		 Tarsier Aug. 2008 Broad Institute tarSyr1 2008-10-15 N/A 2008-07-28
08 otoGar1 Otolemur
garnettii		 Bushbaby Dec. 2006 Broad version 1 2006-12-20 N/A 2007-02-27
09 micMur1 Microcebus
murinus		 Mouse lemur Jun. 2003 Broad Institute micMur1 2008-08-03 N/A 2008-08-04
10 tupBel1 Tupaia
belangeri		 TreeShrew Dec. 2006 Broad version 1 2008-10-15 N/A 2006-12-20
11 mm9 Mus
musculus		 Mouse July 2007 NCBI Build 37 2007-07-20 N/A 2007-08-14
12 rn4 Rattus
norvegicus		 Rat Nov. 2004 Baylor HGSC v. 3.4 2006-03-16 N/A 2006-02-17
13 dipOrd1 Dipodomys
ordii		 Kangaroo rat Jul. 2008 Broad Institute 2008-10-15 N/A 2008-07-28
14 cavPor3 Cavia
porcellus		 Guinea Pig Feb. 2008 Broad Institute cavPor3 2008-04-05 2008-04-08 2008-04-11
15 speTri1 Spermophilus
tridecemlineatus		 Squirrel Feb. 2008 Broad Institute speTri1 2008-08-03 N/A 2008-08-05
16 oryCun1 Oryctolagus
cuniculus		 Rabbit May 2005 Broad May 2005 2005-05-22 N/A 2007-04-17
17 ochPri2 Ochotona
princeps		 Pika Jul. 2008 Broad Institute ochPri2 2008-07-28 N/A 2008-07-30
18 sorAra1 Sorex
araneus		 Shrew June 2006 Broad Institute sorAra (Draft_v2) N/A N/A 2007-03-10
19 eriEur1 Erinaceus
europaeus		 Hedgehog June 2006 Broad Institute eriEur1 (Draft_v1) N/A N/A 2007-03-11
20 felCat3 Felis
catus		 Cat Mar. 2006 Broad Release 3 2006-10-16 N/A 2006-11-10
21 canFam2 Canis
lupus
familiaris		 Dog May 2005 Broad Institute v. 2.0 2005-07-10 N/A 2005-12-29
22 equCab2 Equus
caballus		 Horse Sep. 2007 Broad Institute EquCab2 2008-04-03 N/A 2008-04-11
23 pteVam1 Pteropus
vampyrus		 Megabat Jul. 2008 Broad Institute pteVam1 2008-10-15 N/A 2008-07-13
24 myoLuc1 Myotis
lucifugus		 Microbat Mar. 2006 Broad Institute myoLuc1 2008-07-29 N/A 2008-08-02
25 turTru1 Tursiops
truncatus		 Dolphin Feb. 2008 Broad Institute turTru1 2008-10-15 N/A 2008-07-12
26 bosTau4 Bos
taurus		 Cow Oct. 2007 Baylor Release 4.0 2008-03-10 N/A 2008-03-11
27 vicPac1 Vicugna
vicugna		 Alpaca Jul. 2008 Broad Institute vicPac1 N/A N/A N/A
28 dasNov2 Dasypus
novemcinctus		 Armadillo Jul. 2008 Broad Institute dasNov2 2008-10-07 N/A 2008-08-03
29 choHof1 Choloepus
hoffmanni		 Sloth Jul. 2008 Broad Institute choHof1 2008-10-16 N/A 2008-08-05
30 echTel1 Echinops
telfairi		 Tenrec July 2005 Broad July 2005 2005-08-04 N/A 2007-04-17
31 loxAfr2 Loxodonta
africana		 Elephant Jul. 2008 Broad Institute loxAfr2 2008-10-07 N/A 2008-08-02
32 proCap1 Procavia
capensis		 Rock hyrax Jul. 2008 Broad Institute proCap1 2008-10-16 N/A 2008-08-01
33 monDom4 Monodelphis
domestica		 Opossum Jan. 2006 Broad Inst. monDom4 Jan06 2006-02-10 N/A 2006-02-13
34 ornAna1 Ornithorhynchus
anatinus		 Platypus Mar. 2007 WUSTL version 5.0.1 2007-07-20 N/A 2007-04-04
35 galGal3 Gallus
gallus		 Chicken May 2006 Chicken Genome Sequencing Consortium May 2006 release 2006-05-18 2007-01-02 2006-05-23
36 taeGut1 Taeniopygia
guttata		 Zebra finch Jul. 2008 Washington University taeGut1 N/A 2008-08-05 2008-09-09
37 anoCar1 Anolis
carolinensis		 Lizard Feb. 2007 Broad Institute AnoCar (1.0) 2007-03-07 2007-02-16 2007-02-18
38 xenTro2 Xenopus
tropicalis		 X. tropicalis Aug. 2005 JGI v4.1 2006-04-17 2007-02-20 2006-04-20
39 danRer5 Danio
rerio		 Zebrafish July 2007 Wellcome Trust Sanger Institute, Zv7 assembly 2007-09-05 N/A 2007-10-17
40 tetNig1 Tetraodon
nigroviridis		 Tetraodon Feb. 2004 Genoscope and Broad Institute, V7 2004-08-17 2006-12-05 2006-01-07
41 fr2 Takifugu
rubripes		 Fugu Oct. 2004 JGI V4.0 2007-03-07 2007-01-22 2007-01-24
42 gasAcu1 Gasterosteus
aculeatus		 Stickleback Feb. 2006 Broad Institute gasAcu1 (1.0) 2006-10-17 2006-12-05 2007-02-08
43 oryLat2 Oryzias
latipes		 Medaka Oct. 2005 MEDAKA1 2008-08-12 2008-08-14 2008-08-19
44 petMar1 Petromyzon
marinus		 Lamprey Mar. 2007 WUSTL v.3.0 (March 2007) N/A 2008-01-28 2008-01-29
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