Other genome browsers

Official UCSC Genome mirror site

euronode Bielefeld, Germany.
asianode RIKEN. Yokahama, Japan.

These mirrors are maintained by the Browser staff.

UCSC Genome mirror sites

These mirrors are not populated nor maintained by UCSC. Any questions regarding them should be directed towards their host institution/organization.

Cold Spring Harbor Laboratory. CSHL, NY

Aarhus University. The Department of Molecular Medicine (MOMA) at Aarhus University, Denmark

Locations using UCSC software on other organisms (or people) or additional content on our organisms, including assembly hubs

Note that not all of these sites are updating their software to the latest versions. To learn what version is being used, look at the v### number at the top of the hgTracks page ([host]/cgi-bin/hgTracks).

Ververt monkey at McGill

Cannabis sativa at U Toronto

Aedes aegypti and two other mosquitoes at CalTech

Penn State has some personal human genomes not at UCSC

Manchester, UK has some local content on mouse, C. intestinalis and other orgs. (seems to have been retired or moved)

Epigenomics Epigenomics Roadmap mirror at Washington University, St. Louis has content not on the main UCSC Browser, but mostly also contained in the Track Data Hubs at UCSC.

UNLV Las Vegas Genome Browser hosting D. melanogaster and some plants (including rice, sorghum, Arabidopsis)

Sticklebrowser at Stanford.

Heliconius butterfly at Cornell (butterflygenome.org).

Puerto Rican parrot at WashU (+ alternate assemblies of Drosophila spp.).

Pleurobrachia bachei ctenophore from Whitney Laboratory for Marine Bioscience, St. Augustine, FL.

GWIPS-viz Genome-Wide Information on Protein Synthesis, including Arabidopsis, Trypanosome, herpes virus, phage lambda and others. University College, Cork, Ireland.

Puerto Rican Parrot as well as chicken with some bird comparative genomics and Drosophila spp.. Genomics Education Partnership, Washington University, St. Louis.

Maize at Florida State University.

Xenopus laevis Frog at Medical Research Council, UK.

various hubs At WashU for: Amazona vittata (Puerto Rican Parrot), Chlamydomonas reinhardtii (single-celled alga), Kryptolebias marmoratus, Sebastes rubrivinctus, Xenopus laevis (frog commonly used used in research)

plants. Oak, Rice, Arabidopsis, Chlamydomonas, Volvox, soybean, diatom, Chromochlorus algae, prune, some fungi, bacteria. At UCLA.

vertebrates. Various new fish. At Cambridge University, UK.

DNA Shape at University of Southern California. G-shape. Genome Browser Database for Shape Annotations. Many genomes. Some plants.
Rutgers. G-shape. Genome Browserfor several genomes. Some plants (incl. millet, switchgrass, soybean, rice), insects.

Browsers Using Non-UCSC Software

The UCSC Genome Browser is primarily funded to host vertebrate genomes. However, you can load your own assemblies onto the UCSC site without intervention by UCSC using the Assembly Hub mechanism.

If you are looking for a genome browser that UCSC does not host, it may be available from another source. These browsers are not affiliated with the UCSC Genome Browser and any questions regarding them should be directed to their hosts.