Ce9 conservation alignment
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see also
- Ce9 Genome size statistics
- Ce9 conservation lastz parameters
- Hg19 Genome size statistics
- Hg19 conservation lastz parameters
- Hg18 44way alignment
- Hg18 genome size statistics
- Hg18 44way blastz parameters
do not edit
This table is automatically generated off-line from the UCSC databases. Please do not edit it.
| UCSC db name |
Scientific name |
Common name |
assembly date |
source version |
Repeat Masker |
Window Masker |
chain on ce9 |
% of ce9 matched (chainLink table) |
|
|---|---|---|---|---|---|---|---|---|---|
| 01 | ce9 | Caenorhabditis elegans | C. elegans | Jan 2010 (WS210/ce9) | Washington University School of Medicine GSC and Sanger Institute WS210 | 2010-07-16 | N/A | N/A | N/A |
| 02 | cb3 | Caenorhabditis briggsae | C. briggsae | Jan. 2007 (WUGSC 1.0/cb3) | Washington University School of Medicine GSC and Sanger Institute cb3 | 2009-08-15 | 2009-08-15 | 2010-09-20 | 42.300% |
| 03 | caeRem3 | Caenorhabditis remanei | C. remanei | May 2007 (WUGSC 15.0.1/caeRem3) | Washington University School of Medicine GSC C. remanei 15.0.1 | 2009-09-02 | 2009-08-14 | 2010-09-20 | 41.722% |
| 04 | caePb2 | Caenorhabditis brenneri | C. brenneri | Feb. 2008 (WUGSC 6.0.1/caePb2) | Washington University School of Medicine GSC Caenorhabditis brenneri (PB2801) 6.0.1 | N/A | 2009-08-14 | 2010-09-20 | 40.677% |
| 05 | caeJap3 | Caenorhabditis japonica | C. japonica | Sep. 2010 (WUGSC 7.0.1/caeJap3) | Washington University School of Medicine GSC C. japonica 7.0.1 | 2010-09-21 | 2010-09-21 | 2010-09-22 | 27.580% |
| 06 | haeCon1 | Haemonchus contortus | H. contortus | Dec. 2009 (WormBase WS210/haeCon1) | Sanger Institute | 2010-09-23 | 2010-09-23 | 2010-09-23 | 7.463% |
| 07 | priPac2 | Pristionchus pacificus | P. pacificus | Dec. 2008 (WUGSC 5.0.1/priPac2) | Washington University School of Medicine GSC P. pacificus 5.0.1 | 2010-09-29 | 2010-09-29 | 2010-09-29 | 5.862% |
| 08 | melHap1 | Meloidogyne hapla | M. hapla | Sep. 2008 (M. hapla VW9 WS210/melHap1) | The Center for the Biology of Nematode Parasitism, N.C. State | 2010-09-21 | 2010-09-21 | 2010-09-22 | 3.922% |
| 09 | melInc1 | Meloidogyne incognita | M. incognita | Feb. 2008 (M. incognita WS210/melInc1) | Sanger and Genoscope Genbank: CABB00000000 | 2010-09-21 | 2010-09-21 | 2010-09-22 | 3.301% |
| 10 | bruMal1 | Brugia malayi | B. malayi | Sep. 2007 (TIGR 1.0/bruMal1) | TIGR and the Sanger Institute | 2010-09-21 | 2010-09-22 | 2010-09-22 | 4.790% |
