Debugging cgi-scripts
From genomewiki
Jump to navigationJump to search
See also:
- README.debug in the source tree
- Debug the cgi-scripts with GDB
Complete instructions:
make sure you have compiled with -ggdb by adding
export COPT=-ggdb
to your .bashrc (if using bash). You might need to make clean; make cgi afterwards. Also make sure that the CGIs use the right hg.conf. Add
export HGDB_CONF=<PATHTOCGIS>/hg.conf
to your .bashrc (if using bash). Then:
cd cgi-bin gdb hgc
Paste the parameters from your browser like this:
run 'hgsid=4777921&c=chr21&o=27542938&t=27543085&g=pubsDevBlat&i=1000235064'
To not forget the quotes, do not include the question mark.
To get a stacktrace
break errAbort run 'hgsid=4831549&c=chr4&o=111542364&t=111542367&g=spMut&i=iridogoniodysgenesis+2' where