UCSC to RefSeq correspondence

The correspondences show here are exact, subset, and near match. NCBI assemblies with no equivalent UCSC database are listed.

The columns can be sorted. Click on the small arrow icon next to the column header label.

The external links go to:

• test browser - genome-test.soe.ucsc.edu genome browser
  • public browser - when available the genome.ucsc.edu browser
• RefSeq assembly - assembly information page at NCBI for the refseq version
  • Genbank assembly - assembly information page at NCBI when equivalent, genbank version
• RefSeq FTP - ftp directory at NCBI where the RefSeq assembly can be obtained
  • Genbank FTP - ftp directory for the genbank version when equivalent

Note about the (has dups N) indication. Some older assemblies have entire sequences duplicated in multiple contigs in both the NCBI assembly and the UCSC assembly. Most newer UCSC assemblies have removed the duplicate contigs, and newer NCBI assemblies now also remove the duplicate contigs. The N indicates how many duplicate sequences are in the assembly. These duplicate contigs will cause confusion when coordinating chromosome names.

Note about the (subset N of M) indication. When all contigs of one assembly are completely found in the other assembly, it is marked as a (subset N of M). This is often the result of one assembly including a chrM/chrMT sequence, or duplicate sequences removed from one of the assemblies. The N of M counts the number of sequences in the subset vs. the superset after duplicate sequences have been removed.

Note about the (near match N of M) indication. When almost all contigs of one assembly are completely found in the other assembly, it is marked as a (near match N of M). This is often the result of different sequences for chrM/chrMT, included in each of the assemblies, or a different combination rearrangement of sequences in one assembly. For example monDom5 at UCSC combines all unplaced contigs into a single chrUn sequence whereas NCBI keeps those contigs as separate sequences. The N of M counts the number of sequences identical vs. the total sequences in the other assembly. The limit in this notation is a maximum difference of two sequences in the smaller assembly, and only for vertebrate_mammalian and vertebrate_other assemblies.

NCBI assemblies for the sub-groups vertebrate_mammalian and vertebrate_other with no equivalent UCSC database are indicated as (N sequences) where N is the number of sequences in the NCBI assembly.

UCSC to Genbank assembly accession correspondence

count	test browser public browser	scientific name(s)	common name	RefSeq assembly Genbank assembly	RefSeq FTP Genbank FTP
1	CHM1	Homo_sapiens mole	Homo sapiens hydatidiform mole assembly chm1	GCF_000306695.2_CHM1_1.1	vertebrate_mammalian
2	ailMel1 public	Ailuropoda_melanoleuca	Panda	GCF_000004335.2_AilMel_1.0	vertebrate_mammalian
3	balAcu1 public	Balaenoptera_acutorostrata Balaenoptera acutorostrata scammoni	Minke whale	GCF_000493695.1_BalAcu1.0	vertebrate_mammalian
4	bosTau8 public	Bos_taurus	Cow	GCF_000003055.5_Bos_taurus_UMD_3.1.1	vertebrate_mammalian
5	bubBub1	Bubalus_bubalis	Water buffalo	GCF_000471725.1_UMD_CASPUR_WB_2.0	vertebrate_mammalian
6	calJac3 public	Callithrix_jacchus	Marmoset	GCF_000004665.1_Callithrix_jacchus-3.2 GCA_000004665.1_Callithrix_jacchus-3.2	vertebrate_mammalian GCA_000004665.1
7	camFer1	Camelus_ferus	Bactrian camel	GCF_000311805.1_CB1	vertebrate_mammalian
8	canFam3 public	Canis_lupus Canis lupus familiaris	Dog	GCF_000002285.3_CanFam3.1	vertebrate_mammalian
9	capHir1	Capra_hircus	Domestic goat	GCF_000317765.1_CHIR_1.0	vertebrate_mammalian
10	cavPor3 public	Cavia_porcellus	Guinea pig	GCF_000151735.1_Cavpor3.0	vertebrate_mammalian
11	cerSim1 public	Ceratotherium_simum	White rhinoceros	GCF_000283155.1_CerSimSim1.0	vertebrate_mammalian
12	chlSab2	Chlorocebus_sabaeus	Green monkey	GCF_000409795.2_Chlorocebus_sabeus_1.1	vertebrate_mammalian
13	chrAsi1	Chrysochloris_asiatica	Cape golden mole	GCF_000296735.1_ChrAsi1.0	vertebrate_mammalian
14	colAng1	Colobus_angolensis Colobus angolensis palliatus	Angolan colobus	GCF_000951035.1_Cang.pa_1.0 GCA_000951035.1_Cang.pa_1.0	vertebrate_mammalian GCA_000951035.1
15	dasNov3 public	Dasypus_novemcinctus	Armadillo	GCF_000208655.1_Dasnov3.0	vertebrate_mammalian
16	echTel2 public	Echinops_telfairi	Tenrec	GCF_000313985.1_EchTel2.0	vertebrate_mammalian
17	eleEdw1	Elephantulus_edwardii	Cape elephant shrew	GCF_000299155.1_EleEdw1.0 GCA_000299155.1_EleEdw1.0	vertebrate_mammalian GCA_000299155.1
18	eriEur2 public	Erinaceus_europaeus	Hedgehog	GCF_000296755.1_EriEur2.0	vertebrate_mammalian
19	felCat5 (has dups: 1) public	Felis_catus	Cat	GCF_000181335.1_Felis_catus-6.2 (has dups: 1)	vertebrate_mammalian
20	felCat8 public	Felis_catus	Cat	GCF_000181335.2_Felis_catus_8.0	vertebrate_mammalian
21	galVar1 public	Galeopterus_variegatus	Malayan flying lemur	GCF_000696425.1_G_variegatus-3.0.2	vertebrate_mammalian
22	hetGla2 public	Heterocephalus_glaber	Naked mole-rat	GCF_000247695.1_HetGla_female_1.0	vertebrate_mammalian
23	hg38 public	Homo_sapiens	Human	GCF_000001405.26_GRCh38 GCA_000001405.15_GRCh38	vertebrate_mammalian GCA_000001405.15
24	lepWed1	Leptonychotes_weddellii	Weddell seal	GCF_000349705.1_LepWed1.0	vertebrate_mammalian
25	lipVex1	Lipotes_vexillifer	Yangtze river dolphin	GCF_000442215.1_Lipotes_vexillifer_v1	vertebrate_mammalian
26	macFas5 public	Macaca_fascicularis	Crab-eating macaque	GCF_000364345.1_Macaca_fascicularis_5.0	vertebrate_mammalian
27	mesAur1	Mesocricetus_auratus	Golden hamster	GCF_000349665.1_MesAur1.0	vertebrate_mammalian
28	micMur2 public	Microcebus_murinus	Mouse lemur	GCF_000165445.1_Mmur_2.0 GCA_000165445.2_Mmur_2.0	vertebrate_mammalian GCA_000165445.2
29	micOch1	Microtus_ochrogaster	Prairie vole	GCF_000317375.1_MicOch1.0 GCA_000317375.1_MicOch1.0	vertebrate_mammalian GCA_000317375.1
30	myoBra1	Myotis_brandtii	Brandt's myotis (bat)	GCF_000412655.1_ASM41265v1 GCA_000412655.1_ASM41265v1	vertebrate_mammalian GCA_000412655.1
31	myoDav1	Myotis_davidii	David's myotis (bat)	GCF_000327345.1_ASM32734v1 GCA_000327345.1_ASM32734v1	vertebrate_mammalian GCA_000327345.1
32	myoLuc2 public	Myotis_lucifugus	Microbat	GCF_000147115.1_Myoluc2.0 GCA_000147115.1_Myoluc2.0	vertebrate_mammalian GCA_000147115.1
33	nanGal1	Nannospalax_galili	Upper Galilee mountains blind mole rat	GCF_000622305.1_S.galili_v1.0	vertebrate_mammalian
34	orcOrc1	Orcinus_orca	Killer whale	GCF_000331955.2_Oorc_1.1 GCA_000331955.2_Oorc_1.1	vertebrate_mammalian GCA_000331955.2
35	oryAfe1	Orycteropus_afer Orycteropus afer afer	Aardvark	GCF_000298275.1_OryAfe1.0	vertebrate_mammalian
36	otoGar3 (has dups: 139) public	Otolemur_garnettii	Bushbaby	GCF_000181295.1_OtoGar3 (has dups: 139) GCA_000181295.3_OtoGar3	vertebrate_mammalian GCA_000181295.3
37	oviAri3 public	Ovis_aries	Sheep	GCF_000298735.1_Oar_v3.1	vertebrate_mammalian
38	panHod1	Pantholops_hodgsonii	Tibetan antelope	GCF_000400835.1_PHO1.0	vertebrate_mammalian
39	panPan1 public	Pan_paniscus	Bonobo	GCF_000258655.1_panpan1	vertebrate_mammalian
40	panPan2	Pan_paniscus	Bonobo	GCF_000258655.2_panpan1.1	vertebrate_mammalian
41	panTig1	Panthera_tigris Panthera tigris altaica	Amur tiger	GCF_000464555.1_PanTig1.0	vertebrate_mammalian
42	panTro4 public	Pan_troglodytes	Chimp	GCF_000001515.6_Pan_troglodytes-2.1.4	vertebrate_mammalian
43	panTro5	Pan_troglodytes	Chimp	GCF_000001515.7_Pan_tro_3.0	vertebrate_mammalian
44	papAnu2 public	Papio_anubis	Baboon	GCF_000264685.1_Panu_2.0 GCA_000264685.1_Panu_2.0	vertebrate_mammalian GCA_000264685.1
45	perManBai1	Peromyscus_maniculatus Peromyscus maniculatus bairdii	Prairie deer mouse	GCF_000500345.1_Pman_1.0 GCA_000500345.1_Pman_1.0	vertebrate_mammalian GCA_000500345.1
46	phyCat1	Physeter_catodon	Sperm whale	GCF_000472045.1_Physeter_macrocephalus-2.0.2	vertebrate_mammalian
47	rheMac8 public	Macaca_mulatta	Rhesus	GCF_000772875.2_Mmul_8.0.1	vertebrate_mammalian
48	rhiRox1	Rhinopithecus_roxellana	Golden snub-nosed monkey	GCF_000769185.1_Rrox_v1	vertebrate_mammalian
49	rouAeg1	Rousettus_aegyptiacus	Egyptian rousette	GCF_001466805.2_Raegyp2.0	vertebrate_mammalian
50	sarHar1 public	Sarcophilus_harrisii	Tasmanian devil	GCF_000189315.1_Devil_ref_v7.0 GCA_000189315.1_Devil_ref_v7.0	vertebrate_mammalian GCA_000189315.1
51	sorAra2 public	Sorex_araneus	Shrew	GCF_000181275.1_SorAra2.0 GCA_000181275.2_SorAra2.0	vertebrate_mammalian GCA_000181275.2
52	speTri2 public	Ictidomys_tridecemlineatus Spermophilus tridecemlineatus	Squirrel	GCF_000236235.1_SpeTri2.0 GCA_000236235.1_SpeTri2.0	vertebrate_mammalian GCA_000236235.1
53	susScr3 public	Sus_scrofa	Pig	GCF_000003025.5_Sscrofa10.2	vertebrate_mammalian
54	tarSyr2 public	Carlito_syrichta Tarsius syrichta	Tarsier	GCF_000164805.1_Tarsius_syrichta-2.0.1	vertebrate_mammalian
55	tarSyr2 public	Tarsius_syrichta	Tarsier	GCF_000164805.1_Tarsius_syrichta-2.0.1	vertebrate_mammalian
56	triMan1 public	Trichechus_manatus Trichechus manatus latirostris	Manatee	GCF_000243295.1_TriManLat1.0	vertebrate_mammalian
57	tupChi1	Tupaia_chinensis	Chinese tree shrew	GCF_000334495.1_TupChi_1.0 GCA_000334495.1_TupChi_1.0	vertebrate_mammalian GCA_000334495.1
58	ursMar1	Ursus_maritimus	Polar bear	GCF_000687225.1_UrsMar_1.0	vertebrate_mammalian
59	mm10 (subset: 66 of 179) public	Mus_musculus	Mouse	GCF_000001635.22_GRCm38.p2	vertebrate_mammalian
60	mm10 (subset: 66 of 182) public	Mus_musculus	Mouse	GCF_000001635.23_GRCm38.p3	vertebrate_mammalian
61	mm10 (subset: 66 of 196) public	Mus_musculus	Mouse	GCF_000001635.24_GRCm38.p4	vertebrate_mammalian
62	mm10 (subset: 66 of 207) public	Mus_musculus	Mouse	GCF_000001635.25_GRCm38.p5	vertebrate_mammalian
63	rn6 (subset: 953 of 953) public	Rattus_norvegicus	Rat	GCF_000001895.5_Rnor_6.0 (has dups: 1)	vertebrate_mammalian
64	gorGor3 (subset: 46823 of 50196) public	Gorilla_gorilla Gorilla gorilla gorilla	Gorilla	GCF_000151905.1_gorGor3.1	vertebrate_mammalian
65	vicPac2 (subset: 276611 of 276611) public	Vicugna_pacos	Alpaca	GCF_000164845.1_Vicugna_pacos-2.0.1 (has dups: 115)	vertebrate_mammalian
66	saiBol1 (subset: 2685 of 2686) public	Saimiri_boliviensis	Squirrel monkey	GCF_000235385.1_SaiBol1.0 GCA_000235385.1_SaiBol1.0	vertebrate_mammalian GCA_000235385.1
67	octDeg1 (subset: 7134 of 7134)	Octodon_degus	Brush-tailed rat	GCF_000260255.1_OctDeg1.0 (has dups: 1)	vertebrate_mammalian
68	conCri1 (subset: 2038 of 2038)	Condylura_cristata	Star-nosed mole	GCF_000260355.1_ConCri1.0 (has dups: 2)	vertebrate_mammalian
69	chiLan1 (subset: 2838 of 2839)	Chinchilla_lanigera	Chinchilla	GCF_000276665.1_ChiLan1.0 GCA_000276665.1_ChiLan1.0	vertebrate_mammalian GCA_000276665.1
70	jacJac1 (subset: 10896 of 10896)	Jaculus_jaculus	Lesser Egyptian jerboa	GCF_000280705.1_JacJac1.0 (has dups: 2)	vertebrate_mammalian
71	ochPri3 (subset: 10420 of 10420) public	Ochotona_princeps	Pika	GCF_000292845.1_OchPri3.0 (has dups: 1)	vertebrate_mammalian
72	bosMut1 (subset: 41191 of 41192)	Bos_mutus Bos grunniens mutus	Wild yak	GCF_000298355.1_BosGru_v2.0 GCA_000298355.1_BosGru_v2.0	vertebrate_mammalian GCA_000298355.1
73	eptFus1 (subset: 6788 of 6788)	Eptesicus_fuscus	Big brown bat	GCF_000308155.1_EptFus1.0 (has dups: 1)	vertebrate_mammalian
74	pteAle1 (subset: 65597 of 65598)	Pteropus_alecto	Black flying-fox	GCF_000325575.1_ASM32557v1 GCA_000325575.1_ASM32557v1	vertebrate_mammalian GCA_000325575.1
75	loxAfr3 public	Loxodonta_africana	Elephant	GCF_000001905.1_Loxafr3.0 (subset: 2352 of 2353)	vertebrate_mammalian
76	ornAna1 public	Ornithorhynchus_anatinus	Platypus	GCF_000002275.2_Ornithorhynchus_anatinus_5.0.1 (subset: 200154 of 201523)	vertebrate_mammalian
77	bosTau6 public	Bos_taurus	Cow	GCF_000003055.6_Bos_taurus_UMD_3.1.1 (subset: 3144 of 3317)	vertebrate_mammalian
78	oryCun2 public	Oryctolagus_cuniculus	Rabbit	GCF_000003625.3_OryCun2.0 (subset: 3241 of 3242)	vertebrate_mammalian
79	nomLeu3 public	Nomascus_leucogenys	Gibbon	GCF_000146795.2_Nleu_3.0 (subset: 17484 of 17492) GCA_000146795.3_Nleu_3.0	vertebrate_mammalian GCA_000146795.3
80	turTru2 (has dups: 9) public	Tursiops_truncatus	Dolphin	GCF_000151865.2_Ttru_1.4 (has dups: 9) (subset: 240548 of 240891)	vertebrate_mammalian
81	vicPac2 public	Vicugna_pacos	Alpaca	GCF_000164845.2_Vicugna_pacos-2.0.2 (has dups: 115) (subset: 276610 of 276611)	vertebrate_mammalian
82	criGri1 public	Cricetulus_griseus	Chinese hamster	GCF_000419365.1_C_griseus_v1.0 (subset: 52710 of 52711)	vertebrate_mammalian
83	bisBis1	Bison_bison Bison bison bison	Bison	GCF_000754665.1_Bison_UMD1.0 (subset: 128431 of 450182)	vertebrate_mammalian
84	panTro3 public	Pan_troglodytes	Chimp	GCF_000001515.5_Pan_troglodytes-2.1.4 (near match: 24127 of 24129)	vertebrate_mammalian
85	ornAna2 public	Ornithorhynchus_anatinus	Platypus	GCF_000002275.2_Ornithorhynchus_anatinus_5.0.1 (near match: 200153 of 200154)	vertebrate_mammalian
86	rheMac2 (near match: 21 of 22) public	Macaca_mulatta	Rhesus	GCF_000002255.3_Mmul_051212	vertebrate_mammalian
87	monDom5 (near match: 10 of 11) public	Monodelphis_domestica	Opossum	GCF_000002295.2_MonDom5	vertebrate_mammalian
88	equCab2 (near match: 33 of 34) public	Equus_caballus	Horse	GCF_000002305.2_EquCab2.0	vertebrate_mammalian
89	bosTau7 (near match: 11691 of 11692) public	Bos_taurus	Cow	GCF_000003205.5_Btau_4.6.1	vertebrate_mammalian
90	equPrz1 (near match: 53096 of 53097)	Equus_przewalskii	Przewalski horse	GCF_000696695.1_Burgud	vertebrate_mammalian
91	notFound	Homo_sapiens	Human	GCF_000001405.30_GRCh38.p4 (510 sequences)	vertebrate_mammalian
92	notFound	Homo_sapiens	Human	GCF_000001405.32_GRCh38.p6 (521 sequences)	vertebrate_mammalian
93	notFound	Rattus_norvegicus	Norway rat	GCF_000002265.2_Rn_Celera (has dups: 5) (7041 sequences)	vertebrate_mammalian
94	notFound	Homo_sapiens	Human	GCF_000001405.31_GRCh38.p5 (517 sequences)	vertebrate_mammalian
95	notFound	Ovis_aries Ovis aries musimon	Mouflon	GCF_000765115.1_Oori1 (6173 sequences)	vertebrate_mammalian
96	notFound	Pteropus_vampyrus	Large flying fox	GCF_000151845.1_Pvam_2.0 (36094 sequences)	vertebrate_mammalian
97	notFound	Homo_sapiens	Human	GCF_000001405.33_GRCh38.p7 (525 sequences)	vertebrate_mammalian
98	notFound	Mus_musculus	House mouse	GCF_000002165.2_Mm_Celera (12503 sequences)	vertebrate_mammalian
99	notFound	Homo_sapiens	Human	GCF_000001405.34_GRCh38.p8 (543 sequences)	vertebrate_mammalian
100	notFound	Homo_sapiens	Human	GCF_000001405.27_GRCh38.p1 (471 sequences)	vertebrate_mammalian
101	notFound	Ovis_aries	Sheep	GCF_000298735.2_Oar_v4.0 (5466 sequences)	vertebrate_mammalian
102	notFound	Homo_sapiens	Human	GCF_000001405.28_GRCh38.p2 (486 sequences)	vertebrate_mammalian
103	notFound	Cricetulus_griseus	Chinese hamster	GCF_000223135.1_CriGri_1.0 (109152 sequences)	vertebrate_mammalian
104	notFound	Bos_taurus	Cattle	GCF_000003205.7_Btau_5.0.1 (3143 sequences)	vertebrate_mammalian
105	notFound	Pongo_abelii	Sumatran orangutan	GCF_000001545.4_P_pygmaeus_2.0.2 (61535 sequences)	vertebrate_mammalian
106	notFound	Homo_sapiens	Human	GCF_000001405.29_GRCh38.p3 (494 sequences)	vertebrate_mammalian
107	notFound	Dipodomys_ordii	Ord's kangaroo rat	GCF_000151885.1_Dord_2.0 (65193 sequences)	vertebrate_mammalian
108	allMis1 public	Alligator_mississippiensis	American alligator	GCF_000281125.1_allMis0.2	vertebrate_other
109	allSin1	Alligator_sinensis	Chinese alligator	GCF_000455745.1_ASM45574v1	vertebrate_other
110	anaPla1	Anas_platyrhynchos	Mallard duck	GCF_000355885.1_BGI_duck_1.0	vertebrate_other
111	anoCar2 public	Anolis_carolinensis	Lizard	GCF_000090745.1_AnoCar2.0 GCA_000090745.2_AnoCar2.0	vertebrate_other GCA_000090745.2
112	apaVit1	Apaloderma_vittatum	Bar tailed trogon	GCF_000703405.1_ASM70340v1 GCA_000703405.1_ASM70340v1	vertebrate_other GCA_000703405.1
113	aptFor1	Aptenodytes_forsteri	Emperor penguin	GCF_000699145.1_ASM69914v1 GCA_000699145.1_ASM69914v1	vertebrate_other GCA_000699145.1
114	bucRhi1	Buceros_rhinoceros Buceros rhinoceros silvestris	Rhinoceros hornbill	GCF_000710305.1_ASM71030v1 GCA_000710305.1_ASM71030v1	vertebrate_other GCA_000710305.1
115	calAnn1	Calypte_anna	Anna's hummingbird	GCF_000699085.1_ASM69908v1 GCA_000699085.1_ASM69908v1	vertebrate_other GCA_000699085.1
116	calMil1 public	Callorhinchus_milii	Elephant shark	GCF_000165045.1_Callorhinchus_milii-6.1.3	vertebrate_other
117	capCar1	Caprimulgus_carolinensis	Chuck-will's-widow	GCF_000700745.1_ASM70074v1 GCA_000700745.1_ASM70074v1	vertebrate_other GCA_000700745.1
118	carCri1	Cariama_cristata	Red-legged seriema	GCF_000690535.1_ASM69053v1 GCA_000690535.1_ASM69053v1	vertebrate_other GCA_000690535.1
119	chaVoc2	Charadrius_vociferus	Killdeer	GCF_000708025.1_ASM70802v2 GCA_000708025.2_ASM70802v2	vertebrate_other GCA_000708025.2
120	cheMyd1	Chelonia_mydas	Green seaturtle	GCF_000344595.1_CheMyd_1.0	vertebrate_other
121	chlUnd1	Chlamydotis_macqueenii Chlamydotis undulata macqueenii	Houbara bustard	GCF_000695195.1_ASM69519v1 GCA_000695195.1_ASM69519v1	vertebrate_other GCA_000695195.1
122	colLiv1	Columba_livia	Rock pigeon	GCF_000337935.1_Cliv_1.0	vertebrate_other
123	colStr1	Colius_striatus	Speckled mousebird	GCF_000690715.1_ASM69071v1 GCA_000690715.1_ASM69071v1	vertebrate_other GCA_000690715.1
124	corBra1	Corvus_brachyrhynchos	American crow	GCF_000691975.1_ASM69197v1 GCA_000691975.1_ASM69197v1	vertebrate_other GCA_000691975.1
125	cucCan1	Cuculus_canorus	Common cuckoo	GCF_000709325.1_ASM70932v1 GCA_000709325.1_ASM70932v1	vertebrate_other GCA_000709325.1
126	cynSem1	Cynoglossus_semilaevis	Tongue sole	GCF_000523025.1_Cse_v1.0	vertebrate_other
127	danRer10 public	Danio_rerio	Zebrafish	GCF_000002035.5_GRCz10	vertebrate_other
128	danRer7 public	Danio_rerio	Zebrafish	GCF_000002035.4_Zv9	vertebrate_other
129	egrGar1	Egretta_garzetta	Little egret	GCF_000687185.1_ASM68718v1	vertebrate_other
130	eurHel1	Eurypyga_helias	Sunbittern	GCF_000690775.1_ASM69077v1 GCA_000690775.1_ASM69077v1	vertebrate_other GCA_000690775.1
131	falChe1	Falco_cherrug	Saker falcon	GCF_000337975.1_F_cherrug_v1.0 GCA_000337975.1_F_cherrug_v1.0	vertebrate_other GCA_000337975.1
132	falPer1	Falco_peregrinus	Peregrine falcon	GCF_000337955.1_F_peregrinus_v1.0	vertebrate_other
133	ficAlb2	Ficedula_albicollis	Collared flycatcher	GCF_000247815.1_FicAlb1.5 GCA_000247815.2_FicAlb1.5	vertebrate_other GCA_000247815.2
134	fr3 public	Takifugu_rubripes	Fugu	GCF_000180615.1_FUGU5	vertebrate_other
135	fulGla1	Fulmarus_glacialis	Northern fulmar	GCF_000690835.1_ASM69083v1 GCA_000690835.1_ASM69083v1	vertebrate_other GCA_000690835.1
136	galGal4 public	Gallus_gallus	Chicken	GCF_000002315.3_Gallus_gallus-4.0	vertebrate_other
137	galGal5	Gallus_gallus	Chicken	GCF_000002315.4_Gallus_gallus-5.0	vertebrate_other
138	gavSte1	Gavia_stellata	Red-throated loon	GCF_000690875.1_ASM69087v1	vertebrate_other
139	gekJap0	Gekko japonicus	notFound	GCF_001447785.1_Gekko_japonicus_V1.1	vertebrate_other
140	geoFor1 public	Geospiza_fortis	Medium ground finch	GCF_000277835.1_GeoFor_1.0 GCA_000277835.1_GeoFor_1.0	vertebrate_other GCA_000277835.1
141	halAlb1	Haliaeetus_albicilla	White-tailed eagle	GCF_000691405.1_ASM69140v1 GCA_000691405.1_ASM69140v1	vertebrate_other GCA_000691405.1
142	halLeu1	Haliaeetus_leucocephalus	Bald eagle	GCF_000737465.1_Haliaeetus_leucocephalus-4.0 GCA_000737465.1_Haliaeetus_leucocephalus-4.0	vertebrate_other GCA_000737465.1
143	latCha1 public	Latimeria_chalumnae	Coelacanth	GCF_000225785.1_LatCha1	vertebrate_other
144	lepDis1	Leptosomus_discolor	Cuckoo roller	GCF_000691785.1_ASM69178v1 GCA_000691785.1_ASM69178v1	vertebrate_other GCA_000691785.1
145	mayZeb1	Maylandia_zebra	Zebra mbuna	GCF_000238955.1_MetZeb1.1 GCA_000238955.2_MetZeb1.1	vertebrate_other GCA_000238955.2
146	melUnd1 public	Melopsittacus_undulatus	Budgerigar	GCF_000238935.1_Melopsittacus_undulatus_6.3	vertebrate_other
147	merNub1	Merops_nubicus	Northern carmine bee-eater	GCF_000691845.1_ASM69184v1 GCA_000691845.1_ASM69184v1	vertebrate_other GCA_000691845.1
148	mesUni1	Mesitornis_unicolor	Brown roatelo	GCF_000695765.1_ASM69576v1 GCA_000695765.1_ASM69576v1	vertebrate_other GCA_000695765.1
149	nipNip1	Nipponia_nippon	Crested ibis	GCF_000708225.1_ASM70822v1	vertebrate_other
150	notCor1	Notothenia_coriiceps	Black rockcod	GCF_000735185.1_NC01	vertebrate_other
151	opiHoa1	Opisthocomus_hoazin	Hoatzin	GCF_000692075.1_ASM69207v1 GCA_000692075.1_ASM69207v1	vertebrate_other GCA_000692075.1
152	oreNil2 (has dups: 170) public	Oreochromis_niloticus	Nile tilapia	GCF_000188235.2_Orenil1.1 (has dups: 170)	vertebrate_other
153	pelCri1	Pelecanus_crispus	Dalmatian pelican	GCF_000687375.1_ASM68737v1 GCA_000687375.1_ASM68737v1	vertebrate_other GCA_000687375.1
154	pelSin1	Pelodiscus_sinensis	Chinese softshell turtle	GCF_000230535.1_PelSin_1.0	vertebrate_other
155	phaCar1	Phalacrocorax_carbo	Great cormorant	GCF_000708925.1_ASM70892v1 GCA_000708925.1_ASM70892v1	vertebrate_other GCA_000708925.1
156	phaLep1	Phaethon_lepturus	White-tailed tropicbird	GCF_000687285.1_ASM68728v1 GCA_000687285.1_ASM68728v1	vertebrate_other GCA_000687285.1
157	picPub1	Picoides_pubescens	Downy woodpecker	GCF_000699005.1_ASM69900v1 GCA_000699005.1_ASM69900v1	vertebrate_other GCA_000699005.1
158	poeFor1	Poecilia_formosa	Amazon molly	GCF_000485575.1_Poecilia_formosa-5.1.2 GCA_000485575.1_Poecilia_formosa-5.1.2	vertebrate_other GCA_000485575.1
159	pseHum1	Pseudopodoces_humilis	Tibetan ground jay	GCF_000331425.1_PseHum1.0	vertebrate_other
160	pteGut1	Pterocles_gutturalis	Yellow-throated sandgrouse	GCF_000699245.1_ASM69924v1 GCA_000699245.1_ASM69924v1	vertebrate_other GCA_000699245.1
161	pytBiv0	Python bivittatus	notFound	GCF_000186305.1_Python_molurus_bivittatus-5.0.2	vertebrate_other
162	pytBiv1	Python_bivittatus	Burmese python	GCF_000186305.1_Python_molurus_bivittatus-5.0.2	vertebrate_other
163	strCam1	Struthio_camelus Struthio camelus australis	Ostrich	GCF_000698965.1_ASM69896v1	vertebrate_other
164	taeGut2 public	Taeniopygia_guttata	Zebra finch	GCF_000151805.1_Taeniopygia_guttata-3.2.4	vertebrate_other
165	tauEry1	Tauraco_erythrolophus	Red crested turaco	GCF_000709365.1_ASM70936v1 GCA_000709365.1_ASM70936v1	vertebrate_other GCA_000709365.1
166	thaSir0	Thamnophis sirtalis	notFound	GCF_001077635.1_Thamnophis_sirtalis-6.0 GCA_001077635.2_Thamnophis_sirtalis-6.0	vertebrate_other GCA_001077635.2
167	tinGut2	Tinamus_guttatus	White throated tinamou	GCF_000705375.1_ASM70537v2 GCA_000705375.2_ASM70537v2	vertebrate_other GCA_000705375.2
168	tytAlb1	Tyto_alba	Barn owl	GCF_000687205.1_ASM68720v1 GCA_000687205.1_ASM68720v1	vertebrate_other GCA_000687205.1
169	xenTro7 public	Xenopus_Silurana_tropicalis Xenopus tropicalis	X. tropicalis	GCF_000004195.2_Xtropicalis_v7	vertebrate_other
170	xenTro7 public	Xenopus_tropicalis	X. tropicalis	GCF_000004195.2_Xtropicalis_v7	vertebrate_other
171	xipMac1	Xiphophorus_maculatus	Southern platyfish	GCF_000241075.1_Xiphophorus_maculatus-4.4.2	vertebrate_other
172	zonAlb1	Zonotrichia_albicollis	White-throated sparrow	GCF_000385455.1_Zonotrichia_albicollis-1.0.1 GCA_000385455.1_Zonotrichia_albicollis-1.0.1	vertebrate_other GCA_000385455.1
173	punNye1 (subset: 7233 of 7233)	Pundamilia_nyererei	Pundamilia nyererei	GCF_000239375.1_PunNye1.0 (has dups: 3)	vertebrate_other
174	neoBri1 (subset: 9083 of 9083)	Neolamprologus_brichardi	Princess of Burundi	GCF_000239395.1_NeoBri1.0 (has dups: 16)	vertebrate_other
175	hapBur1 (subset: 7994 of 7994)	Haplochromis_burtoni	Burton's mouthbreeder	GCF_000239415.1_AstBur1.0 (has dups: 7)	vertebrate_other
176	lepOcu1 (subset: 1925 of 1925)	Lepisosteus_oculatus	Spotted gar	GCF_000242695.1_LepOcu1 (has dups: 1)	vertebrate_other
177	serCan1 (subset: 304397 of 304397)	Serinus_canaria	Canary	GCF_000534875.1_SCA1 (has dups: 3)	vertebrate_other
178	stePar1 (subset: 5817 of 5817)	Stegastes_partitus	Bicolor damselfish	GCF_000690725.1_Stegastes_partitus-1.0.2 (has dups: 1)	vertebrate_other
179	pygAde1 (subset: 19264 of 19265)	Pygoscelis_adeliae	Adelie penguin	GCF_000699105.1_ASM69910v1 GCA_000699105.1_ASM69910v1	vertebrate_other GCA_000699105.1
180	esoLuc1 (subset: 5325 of 5326)	Esox_lucius	Northern pike	GCF_000721915.1_EsoLuc1.0 GCA_000721915.1_EsoLuc1.0	vertebrate_other GCA_000721915.1
181	cypVar1 (subset: 9258 of 9259)	Cyprinodon_variegatus	Sheepshead minnow	GCF_000732505.1_C_variegatus-1.0 GCA_000732505.1_C_variegatus-1.0	vertebrate_other GCA_000732505.1
182	corCor1 (subset: 1298 of 1299)	Corvus_cornix Corvus cornix cornix	Hooded crow	GCF_000738735.1_Hooded_Crow_genome	vertebrate_other
183	aquChr2 (subset: 1141 of 1142)	Aquila_chrysaetos Aquila chrysaetos canadensis	Golden eagle	GCF_000766835.1_Aquila_chrysaetos-1.0.2 GCA_000766835.1_Aquila_chrysaetos-1.0.2	vertebrate_other GCA_000766835.1
184	astMex1	Astyanax_mexicanus	Mexican tetra (cavefish)	GCF_000372685.1_Astyanax_mexicanus-1.0.2 (subset: 10735 of 10736)	vertebrate_other
185	manVit1	Manacus_vitellinus	Golden-collared manakin	GCF_000692015.1_ASM69201v2 (subset: 92755 of 92789)	vertebrate_other
186	acaChl1	Acanthisitta_chloris	Rifleman	GCF_000695815.1_ASM69581v1 (subset: 53875 of 53876)	vertebrate_other
187	melGal1 (near match: 5890 of 5891) public	Meleagris_gallopavo	Turkey	GCF_000146605.1_Turkey_2.01	vertebrate_other
188	chrPic2 (near match: 78594 of 78595)	Chrysemys_picta Chrysemys picta bellii	Painted turtle	GCF_000241765.3_Chrysemys_picta_bellii-3.0.3	vertebrate_other
189	poeRet1 (near match: 2766 of 2767)	Poecilia_reticulata	Guppy	GCF_000633615.1_Guppy_female_1.0_MT (has dups: 1)	vertebrate_other
190	notFound	Nestor_notabilis	Kea	GCF_000696875.1_ASM69687v1 (42180 sequences)	vertebrate_other
191	notFound	Coturnix_japonica	Japanese quail	GCF_001577835.1_Coturnix_japonica_2.0 (2012 sequences)	vertebrate_other
192	notFound	Esox_lucius	Northern pike	GCF_000721915.2_ASM72191v2 (1520 sequences)	vertebrate_other
193	notFound	Meleagris_gallopavo	Turkey	GCF_000146605.2_Turkey_5.0 (231286 sequences)	vertebrate_other
194	notFound	Oryzias_latipes	Japanese medaka	GCF_000313675.1_ASM31367v1 (7189 sequences)	vertebrate_other
195	acrEch0	Acromyrmex echinatior	notFound	GCF_000204515.1_Aech_3.9 GCA_000204515.1_Aech_3.9	invertebrate GCA_000204515.1
196	apiMel4	Apis_mellifera	A. mellifera	GCF_000002195.4_Amel_4.5	invertebrate
197	attCep0	Atta cephalotes	notFound	GCF_000143395.1_Attacep1.0	invertebrate
198	caeRem4	Caenorhabditis_remanei	C. remanei	GCF_000149515.1_ASM14951v1 GCA_000149515.1_ASM14951v1	invertebrate GCA_000149515.1
199	camFlo0	Camponotus floridanus	notFound	GCF_000147175.1_CamFlo_1.0 GCA_000147175.1_CamFlo_1.0	invertebrate GCA_000147175.1
200	ce11 public	Caenorhabditis_elegans	C. elegans	GCF_000002985.6_WBcel235	invertebrate
201	cerBir0	Cerapachys biroi	notFound	GCF_000611835.1_CerBir1.0 GCA_000611835.1_CerBir1.0	invertebrate GCA_000611835.1
202	ci3	Ciona_intestinalis	C. intestinalis	GCF_000224145.1_KH	invertebrate
203	dm6 public	Drosophila_melanogaster	D. melanogaster	GCF_000001215.4_Release_6_plus_ISO1_MT	invertebrate
204	droAna3 (has dups: 2)	Drosophila_ananassae	D. ananassae	GCF_000005115.1_dana_caf1 (has dups: 2)	invertebrate
205	droBia2	Drosophila_biarmipes	D. biarmipes	GCF_000233415.1_Dbia_2.0	invertebrate
206	droBip2	Drosophila_bipectinata	D. bipectinata	GCF_000236285.1_Dbip_2.0	invertebrate
207	droEle2	Drosophila_elegans	D. elegans	GCF_000224195.1_Dele_2.0	invertebrate
208	droEre2	Drosophila_erecta	D. erecta	GCF_000005135.1_dere_caf1	invertebrate
209	droEug2	Drosophila_eugracilis	D. eugracilis	GCF_000236325.1_Deug_2.0	invertebrate
210	droFic2	Drosophila_ficusphila	D. ficusphila	GCF_000220665.1_Dfic_2.0	invertebrate
211	droGri2	Drosophila_grimshawi	D. grimshawi	GCF_000005155.2_dgri_caf1	invertebrate
212	droKik2	Drosophila_kikkawai	D. kikkawai	GCF_000224215.1_Dkik_2.0	invertebrate
213	droMir2	Drosophila_miranda	D. miranda	GCF_000269505.1_DroMir_2.2	invertebrate
214	droMoj3	Drosophila_mojavensis	D. mojavensis	GCF_000005175.2_dmoj_caf1	invertebrate
215	droPer1 public	Drosophila_persimilis	D. persimilis	GCF_000005195.2_dper_caf1	invertebrate
216	droRho2	Drosophila_rhopaloa	D. rhopaloa	GCF_000236305.1_Drho_2.0	invertebrate
217	droSuz1	Drosophila_suzukii	D. suzukii	GCF_000472105.1_Dsuzukii.v01	invertebrate
218	droTak2	Drosophila_takahashii	D. takahashii	GCF_000224235.1_Dtak_2.0	invertebrate
219	droVir3 (has dups: 1)	Drosophila_virilis	D. virilis	GCF_000005245.1_dvir_caf1 (has dups: 1)	invertebrate
220	droWil2	Drosophila_willistoni	D. willistoni	GCF_000005925.1_dwil_caf1	invertebrate
221	droYak3	Drosophila_yakuba	D. yakuba	GCF_000005975.2_dyak_caf1	invertebrate
222	harSal0	Harpegnathos saltator	notFound	GCF_000147195.1_HarSal_1.0	invertebrate
223	linHum0 (has dups: 1)	Linepithema humile	notFound	GCF_000217595.1_Lhum_UMD_V04 (has dups: 1)	invertebrate
224	lotGig0	Lottia_gigantea	Limpet	GCF_000327385.1_Helro1	invertebrate
225	pogBar0	Pogonomyrmex barbatus	notFound	GCF_000187915.1_Pbar_UMD_V03	invertebrate
226	solInv0	Solenopsis invicta	notFound	GCF_000188075.1_Si_gnG	invertebrate
227	strPur4 (has dups: 1)	Strongylocentrotus_purpuratus	S. purpuratus	GCF_000002235.3_Spur_3.1 (has dups: 1)	invertebrate
228	araTha1	Arabidopsis thaliana	notFound	GCF_000001735.3_TAIR10	plant
229	ricCom1	Ricinus communis	notFound	GCF_000151685.1_JCVI_RCG_1.1	plant
230	bunEbo1	Bundibugyo_virus Bundibugyo ebolavirus	Bundibugyo ebolavirus	GCF_000889155.1_ViralProj51245	viral
231	resEbo1	Reston_ebolavirus	Reston ebolavirus	GCF_000854085.1_ViralProj15006	viral
232	sudEbo1	Sudan_ebolavirus	Sudan ebolavirus	GCF_000855585.1_ViralProj15012	viral
233	taiEbo1	Tai_Forest_ebolavirus	Tai forest ebolavirus	GCF_000888475.1_ViralProj51257	viral
234	zaiEbo1	Zaire_ebolavirus	Zaire ebolavirus	GCF_000848505.1_ViralProj14703	viral
235	sacCer3 public	Saccharomyces_cerevisiae	S. cerevisiae	GCF_000146045.2_R64	fungi