Hg38 5-way conservation alignment
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see also
- Human 5-way Hg38 5-way Genome size statistics
- Human 5-way Hg38 5-way conservation lastz parameters
- all other UCSC Multiple Alignments
do not edit
This table is automatically generated off-line from the UCSC databases. Please do not edit it.
| URL to assembly sequence |
UCSC db name/ genome-preview browser |
Scientific name/ assembly information |
Common name |
assembly date (version) | source version |
Repeat Masker |
Window Masker |
chain on hg38 |
% of hg38 matched (chainLink table) |
|---|---|---|---|---|---|---|---|---|---|
| 01 | hg38 | Homo sapiens | Human | Dec. 2013 (GRCh38/hg38) | GRCh38 Genome Reference Consortium Human Reference 38 (GCA_000001405.2) | 2014-01-10 | 2013-12-25 | 2015-01-14 | N/A |
| 02 | galVar1 | Galeopterus variegatus | Malayan flying lemur | Jun. 2014 (G_variegatus-3.0.2/galVar1) | Washington University (WashU) | 2016-03-02 | 2016-03-04 | 2016-04-26 | 57.036% |
| 03 | tupChi1 | Tupaia chinensis | Chinese tree shrew | Jan 2013 (TupChi_1.0/tupChi1) | BGI GCA_000334495.1 | 2013-07-05 | 2013-07-05 | 2015-02-19 | 45.256% |
| 04 | cavPor3 | Cavia porcellus | Guinea pig | Feb. 2008 (Broad/cavPor3) | Broad Institute cavPor3 | 2009-08-15 | 2009-08-15 | 2015-04-28 | 42.371% |
| 05 | mm10 | Mus musculus | Mouse | Dec. 2011 (GRCm38/mm10) | Genome Reference Consortium Mouse Build 38 (GCA_000001635.2) | 2012-02-06 | 2012-02-07 | 2015-04-09 | 31.653% |
