DanRer7 conservation alignment

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see also

do not edit

This table is automatically generated off-line from the UCSC databases. Please do not edit it.

  UCSC
db name
Scientific
name
Common
name
assembly
date
source
version
Repeat
Masker
Window
Masker
chain
on danRer7
% of danRer7
matched
(chainLink table)
01danRer7Danio
rerio
Zebrafish Jul. 2010 (Zv9/danRer7) Wellcome Trust Sanger Institute Zv9 (GCA_000002035.2) 2010-12-03 N/AN/AN/A
02gasAcu1Gasterosteus
aculeatus
Stickleback Feb. 2006 (Broad/gasAcu1) Broad Institute gasAcu1 (1.0) (NCBI project 13579, AANH01000000) 2009-08-15 2009-08-152010-12-1710.270%
03oryLat2Oryzias
latipes
Medaka Oct. 2005 (NIG/UT MEDAKA1/oryLat2) NIG and Tokyo Univ MEDAKA1 (NCBI project 16702, BAAF04000000) 2009-08-15 2009-08-152010-12-1710.032%
04tetNig2Tetraodon
nigroviridis
Tetraodon Mar. 2007 (Genoscope 8.0/tetNig2) Genoscope Tetraodon v8.0 (NCBI project 12350, CAAE01000000) 2010-06-07 2009-09-022010-12-176.273%
05fr2Takifugu
rubripes
Fugu Oct. 2004 (JGI 4.0/fr2) JGI V4.0 2009-08-14 2009-08-142010-12-217.363%
06xenTro2Xenopus
tropicalis
X. tropicalis Aug. 2005 (JGI 4.1/xenTro2) JGI v4.1 2009-08-16 2009-09-022010-12-176.428%
07mm9Mus
musculus
Mouse July 2007 (NCBI37/mm9) NCBI Build 37 2009-08-14 N/A2010-12-175.104%
08hg19Homo
sapiens
Human Feb. 2009 (GRCh37/hg19) GRCh37 Genome Reference Consortium Human Reference 37 (GCA_000001405.1) 2009-08-15 N/A2010-12-206.151%