Other genome browsers: Difference between revisions

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* [http://moma.ki.au.dk/genome-mirror/ Aarhus University] The Department of Molecular Medicine (MOMA) at Aarhus University, Denmark
* [http://moma.ki.au.dk/genome-mirror/ Aarhus University] The Department of Molecular Medicine (MOMA) at Aarhus University, Denmark


== Locations using UCSC software on other organisms ==
== Locations using UCSC software on other organisms (or people) ==


* [http://www.genomequebec.mcgill.ca/compgen/browser-VPR/cgi-bin/hgGateway Ververt monkey] at McGill
* [http://www.genomequebec.mcgill.ca/compgen/browser-VPR/cgi-bin/hgGateway Ververt monkey] at McGill
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* [http://aedes.caltech.edu/cgi-bin/hgGateway Aedes aegypti] mosquito at CalTech
* [http://aedes.caltech.edu/cgi-bin/hgGateway Aedes aegypti] mosquito at CalTech
* Penn State has some [http://main.genome-browser.bx.psu.edu personal human genomes] not at UCSC


== Non-UCSC (genome.ucsc.edu) Browsers ==
== Non-UCSC (genome.ucsc.edu) Browsers ==

Revision as of 00:01, 19 January 2013

UCSC Genome mirror sites

These mirrors are not populated nor maintained by UCSC. Any questions regarding them should be directed towards their host institution/organization.

  • Aarhus University The Department of Molecular Medicine (MOMA) at Aarhus University, Denmark

Locations using UCSC software on other organisms (or people)

Non-UCSC (genome.ucsc.edu) Browsers

The UCSC Genome Browser is primarily funded to host vertebrate genomes. If you are looking for a genome browser that UCSC does not host, it may be available from another source. These browsers are not affiliated with the UCSC Genome Browser and any questions regarding them should be directed to their hosts.

Animal Browsers

  • NONCODE genome browser. UCSC browser with special tracks for non-coding annotations.
  • Vista Lawrence Berkeley Lab, CA
  • GARFIELD cat genome browser, Federick, MD
  • Bio2Rdf Semantic web atlas of postgenomic knowledge about human and mouse
  • Epigenomics Epigenomics Roadmap mirror at Washington University, St. Louis.
  • Eyebrowse specializing in eye tissue sequences
  • NRSP-8 National Animal Genome Research Program - Bioinformatics Coordination Program


Plant Browsers

  • EnsemblPlants incl. Arabidopsis, rice, corn, tomato, soybean, Physcomitrella
  • Arabidopsis arabidopsis.info Ensembl-based genome browser
  • Zea mays Maize Genome Sequencing Project

Fungi/Yeast Browsers


Other

  • JPGV Jena Prokaryotic Genome Browser

See Also

Related Wikis