Talk:Whole genome alignment howto
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More worked examples
It would be nice to see another worked example grabbing 4D sites, training on these, and using featureBits to choose appropriate cutoffs or target parameters. It is still a bit of a file-format war to get all the data in appropriate formats (for genomes not part of the genomeBrowser). --Stajich 23:21, 25 February 2008 (PST)
I absolutely agree, problem is I don't know how to do this. It would be nice if someone from UCSC extended the phastCons-stuff. I'm only interested in the alignment, so I didn't spend too much time on phastCons. --Max 08:08, 11 March 2008 (PDT)
