XenTro9 11-way conservation alignment

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see also

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This table is automatically generated off-line from the UCSC databases. Please do not edit it.

URL to
assembly
sequence
UCSC db name/
genome-preview
browser
Scientific name/
assembly information
Common
name
assembly date (version) source
version
Repeat
Masker
Window
Masker
chain
on xenTro9
% of xenTro9
matched
(chainLink table)
01xenTro9Xenopus
tropicalis
X. tropicalis Jul. 2016 (Xenopus_tropicalis_v9.1/xenTro9) DOE Joint Genome Institute 2017-03-27 2017-03-27 N/AN/A
02xenLae2Xenopus
laevis
African clawed frog Aug. 2016 (Xenopus_laevis_v2/xenLae2) International Xenopus Sequencing Consortium 2017-03-29 2017-03-29 2017-04-0654.877%
03nanPar1Nanorana
parkeri
Tibetan frog Mar. 2015 (BGI_ZX_2015/nanPar1) ASM93562v1 2015-03-19 2015-03-20 2017-03-308.180%
04chrPic2Chrysemys
picta
bellii
Painted turtle Mar. 2014 (v3.0.3/chrPic2) International Painted Turtle Genome Sequencing Consortium 2014-04-29 2014-04-10 2017-04-076.459%
05monDom5Monodelphis
domestica
Opossum Oct. 2006 (Broad/monDom5) Broad Institute monDom5 (NCBI project 12561, accession AAFR03000000) 2009-08-14 2009-08-14 2017-04-075.414%
06galGal5Gallus
gallus
Chicken Dec 2015 (Gallus_gallus-5.0/galGal5) International Chicken Genome Consortium 2016-04-14 2016-04-14 2017-04-073.387%
07anoCar2Anolis
carolinensis
Lizard May 2010 (Broad AnoCar2.0/anoCar2) Broad Institute of MIT and Harvard AnoCar 2.0 (GCA_000090745.1) 2011-04-12 2011-04-13 2017-04-075.977%
08canFam3Canis
lupus
familiaris
Dog Sep. 2011 (Broad CanFam3.1/canFam3) Broad CanFam3.1 (GCA_000002285.2) 2012-01-05 2012-01-06 2017-04-063.311%
09hg38Homo
sapiens
Human Dec. 2013 (GRCh38/hg38) GRCh38 Genome Reference Consortium Human Reference 38 (GCA_000001405.2) 2014-01-10 2013-12-25 2017-03-307.950%
10mm10Mus
musculus
Mouse Dec. 2011 (GRCm38/mm10) Genome Reference Consortium Mouse Build 38 (GCA_000001635.2) 2012-02-06 2012-02-07 2017-03-306.581%
11fr3Takifugu
rubripes
Fugu Oct. 2011 (FUGU5/fr3) Fugu Genome Sequencing Consortium - FUGU5 (NCBI project 1434, GCA_000180615.2) 2011-11-16 2011-11-17 2017-04-073.777%