112 fly pair wise alignments

112 fly pair-wise alignments to D. melanogaster/dm6

order count	accession assembly name	common name	scientific name	clade	taxId	coverage	reciprocal best coverage	syntenic coverage
1	GCF_000001215.4 Release_6_plus_ISO1_MT	fruit fly	Drosophila melanogaster	Drosophila	7227	% 98.737	% 98.643	% 97.667
2	GCF_000005215.3 dsec_caf1	flies	Drosophila sechellia	Drosophila	7238	% 82.016	% 76.817	% 74.497
3	GCF_000754195.2 ASM75419v2	flies	Drosophila simulans	Drosophila	7240	% 81.926	% 76.897	% 75.562
4	GCF_000005975.2 dyak_caf1	flies	Drosophila yakuba	Drosophila	7245	% 79.951	% 75.423	% 72.041
5	GCF_000005135.1 dere_caf1	flies	Drosophila erecta	Drosophila	7220	% 79.216	% 74.711	% 73.011
6	GCF_000224235.1 Dtak_2.0	flies	Drosophila takahashii	Drosophila	29030	% 74.939	% 71.163	% 68.355
7	GCF_000224195.1 Dele_2.0	flies	Drosophila elegans	Drosophila	30023	% 74.867	% 71.190	% 67.623
8	GCF_000236325.1 Deug_2.0	flies	Drosophila eugracilis	Drosophila	29029	% 74.686	% 71.266	% 69.625
9	GCF_000233415.1 Dbia_2.0	flies	Drosophila biarmipes	Drosophila	125945	% 74.478	% 70.862	% 65.245
10	GCF_000236305.1 Drho_2.0	flies	Drosophila rhopaloa	Drosophila	1041015	% 74.383	% 70.404	% 62.588
11	GCF_000220665.1 Dfic_2.0	flies	Drosophila ficusphila	Drosophila	30025	% 74.168	% 70.423	% 68.704
12	GCF_000472105.1 Dsuzukii.v01	flies	Drosophila suzukii	Drosophila	28584	% 74.036	% 70.127	% 62.212
13	GCF_002093755.1 Dser1.0	flies	Drosophila serrata	Drosophila	7274	% 70.419	% 67.226	% 61.397
14	GCF_000224215.1 Dkik_2.0	flies	Drosophila kikkawai	Drosophila	30033	% 70.073	% 66.396	% 62.887
15	GCF_000005115.1 dana_caf1	flies	Drosophila ananassae	Drosophila	7217	% 65.806	% 62.422	% 57.253
16	GCF_000236285.1 Dbip_2.0	flies	Drosophila bipectinata	Drosophila	42026	% 65.394	% 62.053	% 57.596
17	GCF_002217835.1 Dobs_1.0	flies	Drosophila obscura	Drosophila	7282	% 61.561	% 58.325	% 54.856
18	GCF_000001765.3 Dpse_3.0	flies	Drosophila pseudoobscura pseudoobscura	Drosophila	46245	% 59.426	% 56.346	% 50.672
19	GCF_000269505.1 DroMir_2.2	flies	Drosophila miranda	Drosophila	7229	% 58.891	% 56.001	% 51.810
20	GCF_000005195.2 dper_caf1	flies	Drosophila persimilis	Drosophila	7234	% 57.869	% 54.929	% 50.052
21	GCA_002749795.1 Dsub_1.0	flies	Drosophila subobscura	Drosophila	7241	% 55.249	% 53.549	% 50.225
22	GCF_000005925.1 dwil_caf1	flies	Drosophila willistoni	Drosophila	7260	% 51.228	% 48.305	% 39.093
23	GCF_000005245.1 dvir_caf1	flies	Drosophila virilis	Drosophila	7244	% 48.970	% 45.648	% 39.374
24	GCF_000005155.2 dgri_caf1	flies	Drosophila grimshawi	Drosophila	7222	% 47.666	% 45.098	% 38.022
25	GCF_000005175.2 dmoj_caf1	flies	Drosophila mojavensis	Drosophila	7230	% 47.168	% 43.637	% 37.633
26	GCF_002780465.1 ASM278046v1	flies	Drosophila hydei	Drosophila	7224	% 45.605	% 43.146	% 39.090
27	GCA_001245395.1 D._americana_H5_strain_genome_assembly	flies	Drosophila americana	Drosophila	40366	% 45.382	% 42.585	% 23.381
28	GCA_000298335.1 DroAlb_1.0	flies	Drosophila albomicans	Drosophila	7291	% 44.346	% 41.158	% 25.201
29	GCF_001277935.1 ASM127793v1	flies	Drosophila busckii	Drosophila	30019	% 42.220	% 39.281	% 31.758
30	GCF_001654025.1 ASM165402v1	flies	Drosophila arizonae	Drosophila	7263	% 41.792	% 39.022	% 32.657
31	GCA_002222885.1 ASM222288v1	flies	Drosophila nasuta	Drosophila	42062	% 39.549	% 36.390	% 7.560
32	GCA_001752445.1 ZP_IN_1.0	flies	Zaprionus indianus	flies	76712	% 36.928	% 33.048	% 6.376
33	GCF_001654015.1 ASM165401v1	flies	Drosophila navojoa	Drosophila	7232	% 36.286	% 33.214	% 26.266
34	GCA_001014445.1 ASM101444v1	flies	Scaptodrosophila lebanonensis	flies	7225	% 36.017	% 33.165	% 10.587
35	GCA_001014415.1 ASM101441v1	flies	Phortica variegata	flies	462259	% 24.774	% 22.301	% 5.843
36	GCA_002237135.1 Tel_dalmanni_2A_v1.0	flies	Teleopsis dalmanni	flies	139649	% 23.293	% 20.362	% 5.645
37	GCF_001687245.1 Rhagoletis_zephyria_1.0	snowberry fruit fly	Rhagoletis zephyria	other	28612	% 21.196	% 17.813	% 2.689
38	GCF_000699065.1 Lcup_2.0	Australian sheep blowfly	Lucilia cuprina	other	7375	% 20.785	% 17.867	% 5.586
39	GCF_001853355.1 ASM185335v1	flies	Bactrocera latifrons	flies	174628	% 20.469	% 17.499	% 7.177
40	GCF_001188975.1 gapfilled_joined_lt9474.gt500.covgt10	olive fruit fly	Bactrocera oleae	other	104688	% 20.400	% 17.503	% 6.304
41	GCF_000806345.1 ASM80634v1	melon fly	Bactrocera cucurbitae	other	28588	% 20.252	% 17.366	% 8.183
42	GCA_001735585.1 ASM173558v1	black blowfly	Phormia regina	other	7380	% 20.158	% 17.311	% 1.107
43	GCF_000347755.3 Ccap_2.1	Mediterranean fruit fly	Ceratitis capitata	other	7213	% 19.997	% 17.255	% 7.370
44	GCA_000695345.1 Assembly_2.2_of_Bactrocera_tryoni_genome	Queensland fruit fly	Bactrocera tryoni	other	59916	% 19.523	% 16.269	% 3.969
45	GCF_000789215.1 ASM78921v2	oriental fruit fly	Bactrocera dorsalis	other	27457	% 19.222	% 16.309	% 6.919
46	GCF_001015335.1 Stomoxys_calcitrans-1.0.1	stable fly	Stomoxys calcitrans	other	35570	% 18.152	% 15.680	% 3.734
47	GCA_000688715.1 Glossina_pallidipes-1.0.3	tsetse fly	Glossina pallidipes	other	7398	% 17.101	% 14.994	% 5.616
48	GCA_000671735.1 Glossina_fuscipes-3.0.2	tsetse fly	Glossina fuscipes fuscipes	other	201502	% 17.078	% 15.035	% 5.045
49	GCA_000671755.1 Glossina_brevipalpis_1.0.3	tsetse fly	Glossina brevipalpis	other	37001	% 17.022	% 14.980	% 5.521
50	GCA_001077435.1 ASM107743v1	tsetse fly	Glossina morsitans morsitans	other	37546	% 16.954	% 14.868	% 2.119
51	GCA_000688735.1 Glossina_austeni-1.0.3	tsetse fly	Glossina austeni	other	7395	% 16.948	% 14.847	% 5.064
52	GCA_000818775.1 Glossina_palpalis_gambiensis-2.0.1	tsetse fly	Glossina palpalis gambiensis	other	67801	% 16.827	% 14.768	% 4.540
53	GCA_001014675.1 ASM101467v1	flies	Ephydra gracilis	flies	1577615	% 16.643	% 14.428	% 0.911
54	GCA_001014835.1 ASM101483v1	common green bottle fly	Lucilia sericata	other	13632	% 15.766	% 13.320	% 0.519
55	GCA_001014515.1 ASM101451v1	tsetse fly	Glossina morsitans	other	7394	% 15.733	% 13.720	% 1.238
56	GCA_001017275.1 ASM101727v1	urban bluebottle blowfly	Calliphora vicina	other	7373	% 15.621	% 12.708	% 0.349
57	GCF_001876365.2 canu_80X_arrow2.2	Asian tiger mosquito	Aedes albopictus	other	7160	% 15.172	% 12.698	% 0.828
58	GCA_001015235.1 ASM101523v1	flies	Sphyracephala brevicornis	flies	139677	% 14.969	% 12.187	% 0.369
59	GCA_001932985.1 200kmer_750.trimmed	flies	Proctacanthus coquilletti	flies	1717472	% 14.594	% 12.338	% 2.120
60	GCA_001014575.1 ASM101457v1	flies	Themira minor	flies	292402	% 14.206	% 11.272	% 0.825
61	GCF_002204515.2 AaegL5.0	yellow fever mosquito	Aedes aegypti	other	7159	% 14.028	% 11.507	% 0.847
62	GCF_000209185.1 CulPip1.0	southern house mosquito	Culex quinquefasciatus	other	7176	% 13.421	% 10.996	% 0.942
63	GCA_001542645.1 ASM154264v1	African malaria mosquito	Anopheles gambiae	Anopheles	7165	% 13.337	% 10.786	% 0.876
64	GCF_000005575.2 AgamP3	African malaria mosquito	Anopheles gambiae str. PEST	Anopheles	180454	% 13.328	% 10.657	% 1.126
65	GCA_001015175.1 ASM101517v1	flies	Megaselia abdita	flies	88686	% 13.126	% 10.704	% 0.252
66	GCA_002091835.1 ASM209183v1	mosquitos	Anopheles maculatus	Anopheles	74869	% 13.114	% 10.911	% 0.821
67	GCA_001017515.1 ASM101751v1	flies	Tephritis californica	flies	594049	% 12.995	% 10.479	% 0.067
68	GCA_000473845.2 Anop_meru_MAF_V1	mosquitos	Anopheles merus	Anopheles	30066	% 12.901	% 10.341	% 1.016
69	GCA_000349145.1 Anop_diru_WRAIR2_V1	mosquitos	Anopheles dirus	Anopheles	7168	% 12.779	% 10.236	% 1.099
70	GCA_000349185.1 Anop_arab_DONG5_A_V1	mosquitos	Anopheles arabiensis	Anopheles	7173	% 12.738	% 10.298	% 1.126
71	GCA_000473505.1 Anop_atro_EBRO_V1	mosquitos	Anopheles atroparvus	Anopheles	41427	% 12.705	% 10.228	% 1.099
72	GCA_000349105.1 Anop_epir_epiroticus2_V1	mosquitos	Anopheles epiroticus	Anopheles	199890	% 12.650	% 10.196	% 0.932
73	GCA_000349065.1 Anop_quad_QUAD4_A_V1	mosquitos	Anopheles quadriannulatus	Anopheles	34691	% 12.514	% 10.160	% 1.057
74	GCA_000300775.2 ASM30077v2	Asian malaria mosquito	Anopheles stephensi	Anopheles	30069	% 12.374	% 10.069	% 1.042
75	GCA_000473445.2 Anop_fara_FAR1_V2	mosquitos	Anopheles farauti	Anopheles	69004	% 12.374	% 10.105	% 1.064
76	GCA_000349025.1 Anop_mini_MINIMUS1_V1	mosquitos	Anopheles minimus	Anopheles	112268	% 12.353	% 10.054	% 1.089
77	GCA_000349085.1 Anop_fune_FUMOZ_V1	African malaria mosquito	Anopheles funestus	Anopheles	62324	% 12.236	% 10.013	% 0.956
78	GCA_000473525.2 Anop_mela_CM1001059_A_V2	mosquitos	Anopheles melas	Anopheles	34690	% 12.182	% 9.866	% 0.468
79	GCA_000150765.1 m5	African malaria mosquito	Anopheles gambiae M	Anopheles	377271	% 12.160	% 9.623	% 0.872
80	GCA_001014945.1 ASM101494v1	mothmidge	Clogmia albipunctata	other	85120	% 12.098	% 9.885	% 0.376
81	GCA_000472065.2 Anop_sine_SINENSIS_V1	mosquitos	Anopheles sinensis	Anopheles	74873	% 12.094	% 9.680	% 0.653
82	GCA_000262795.1 Ppap_1.0	flies	Phlebotomus papatasi	flies	29031	% 12.066	% 9.731	% 0.301
83	GCA_000473375.1 Anop_culi_species_A-37_1_V1	mosquitos	Anopheles culicifacies	Anopheles	139723	% 11.996	% 9.816	% 0.573
84	GCA_001014335.1 ASM101433v1	flies	Coboldia fuscipes	flies	170625	% 11.908	% 10.130	% 0.797
85	GCA_900258525.2 Cson_Genome_version_2.0	flies	Culicoides sonorensis	flies	179676	% 11.882	% 10.108	% 0.497
86	GCA_000349125.2 Anop_albi_ALBI9_A_V2	mosquitos	Anopheles albimanus	Anopheles	7167	% 11.850	% 9.826	% 1.017
87	GCA_000349165.1 Anop_chri_ACHKN1017_V1	mosquitos	Anopheles christyi	Anopheles	43041	% 11.794	% 9.620	% 0.420
88	GCA_002091845.1 ASM209184v1	mosquitos	Anopheles cracens	Anopheles	123217	% 11.692	% 9.661	% 0.646
89	GCA_002846955.1 A_aquasalis_v1.0	mosquitos	Anopheles aquasalis	Anopheles	42839	% 11.625	% 9.589	% 0.628
90	GCA_001014895.1 ASM101489v1	flies	Hermetia illucens	flies	343691	% 11.575	% 9.548	% 0.049
91	GCA_000211455.3 A_darlingi_v1	American malaria mosquito	Anopheles darlingi	Anopheles	43151	% 11.465	% 9.624	% 0.776
92	GCA_001017455.1 ASM101745v1	grey fleshfly	Neobellieria bullata	other	7385	% 11.431	% 8.641	% 0.074
93	GCA_001015115.1 ASM101511v1	flies	Eutreta diana	flies	1577624	% 11.427	% 9.111	% 0.049
94	GCA_000956215.1 ASM95621v1	mosquitos	Anopheles farauti No. 4	Anopheles	59191	% 11.042	% 8.957	% 0.387
95	GCA_001015215.1 ASM101521v1	flies	Holcocephala fusca	flies	1577617	% 10.901	% 9.276	% 0.266
96	GCA_000956275.1 ASM95627v1	mosquitos	Anopheles koliensis	Anopheles	30065	% 10.841	% 8.788	% 0.253
97	GCA_000775305.1 ASM77530v1	flies	Belgica antarctica	flies	315563	% 10.737	% 9.031	% 0.588
98	GCA_000956255.1 ASM95625v1	mosquitos	Anopheles punctulatus	Anopheles	30068	% 10.686	% 8.649	% 0.327
99	GCA_900005825.1 CLUMA_1.0	flies	Clunio marinus	flies	568069	% 10.684	% 9.102	% 0.770
100	GCA_000149185.1 Mdes_1.0	Hessian fly	Mayetiola destructor	other	39758	% 10.512	% 8.836	% 0.608
101	GCA_001047195.1 ASM104719v1	flies	Sarcophagidae sp. BV-2014	flies	1577618	% 10.061	% 7.957	% 0.053
102	GCA_000786525.1 CT01	flies	Chironomus tentans	flies	7153	% 9.943	% 8.534	% 0.484
103	GCA_001014505.1 ASM101450v1	flies	Chironomus riparius	flies	315576	% 9.683	% 8.277	% 0.306
104	GCA_001014935.1 ASM101493v1	celery leafminer	Liriomyza trifolii	other	198433	% 9.358	% 6.972	% 0.017
105	GCA_001015145.1 ASM101514v1	flies	Eristalis dimidiata	flies	1352481	% 9.259	% 7.114	% 0.058
106	GCA_000439205.1 Anili1	mosquitos	Anopheles nili	Anopheles	185578	% 9.202	% 6.899	% 0.045
107	GCA_001014815.1 ASM101481v1	flies	Chaoborus trivitattus	flies	204567	% 8.821	% 6.974	% 0.076
108	GCA_001017535.1 ASM101753v1	flies	Tipula oleracea	flies	312236	% 8.632	% 6.960	% 0.231
109	GCA_001014875.1 ASM101487v1	flies	Condylostylus patibulatus	flies	1577614	% 8.158	% 6.303	% 0.024
110	GCA_000341915.2 ASM34191v2	flies	Megaselia scalaris	flies	36166	% 8.143	% 6.166	% 0.139
111	GCA_001014665.1 ASM101466v1	flies	Trupanea jonesi	flies	1582032	% 7.450	% 5.115	% 0.016
112	GCA_001014425.1 ASM101442v1	flies	Trichoceridae sp. BV-2014	flies	1577620	% 3.974	% 2.904	% 0.006