Ce11 135-way conservation alignment
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see also
- C. elegans 135-way Ce11 135-way Genome size statistics
- C. elegans 135-way Ce11 135-way conservation lastz parameters
- all other UCSC Multiple Alignments
do not edit
This table is automatically generated off-line from the UCSC databases. Please do not edit it.
URL to assembly sequence |
UCSC db name/ genome-preview browser |
Scientific name/ assembly information |
Common name |
assembly date (version) | source version |
Repeat Masker |
Window Masker |
chain on ce11 |
% of ce11 matched (chainLink table) |
---|---|---|---|---|---|---|---|---|---|
01 | ce11 | Caenorhabditis elegans | C. elegans | Feb. 2013 (WBcel235/ce11) | C. elegans Sequencing Consortium WBcel235 (GCA_000002985.3) | 2015-06-10 | 2015-06-10 | N/A | 100.000% |
02 | C_sp38_MB_2015 | Caenorhabditis sp. 38 MB-2015 | C_sp38_MB_2015 | 2018-8-31 (GCA_900536415.1) | BANG/CQUIO_v1 | %34.42 | N/A | 2018-12-05 | 43.814% |
03 | caeAng2 | Caenorhabditis angaria | C. angaria | Apr. 2012 (WS232/ps1010rel8/caeAng2) | Division of Biology, California Institute of Technology | 2015-06-30 | 2015-06-30 | 2018-10-25 | 39.417% |
04 | caeJap4 | Caenorhabditis japonica | C. japonica | Aug. 2010 (WUSTL 7.0.1/caeJap4) | Washington University School of Medicine GSC C. japonica 7.0.1 (GCA_000147155.1) | 2011-06-03 | 2011-06-03 | 2018-10-25 | 45.308% |
05 | C_sp34_TK_2017 | Caenorhabditis sp. 34 TK-2017 | C_sp34_TK_2017 | 2017-6-22 (GCA_003052745.1) | University of Miyazaki/Sp34_v7 | %33.39 | N/A | 2018-12-05 | 53.670% |
06 | C_briggsae | [ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/004/555/GCA_000004555v3_CB4/ Caenorhabditis briggsae Caenorhabditis briggsae] | C_briggsae | 2014-7-2 (GCA_000004555.3) | The C.briggsae Sequencing Consortium/CB4 | %35.35 | N/A | 2018-12-05 | 60.930% |
07 | cb4 | Caenorhabditis briggsae | C. briggsae | Apr. 2011 (WS225/cb4) | Washington University School of Medicine GSC and Sanger Institute cb4 | 2011-05-24 | 2011-05-24 | 2015-07-01 | 39.384% |
08 | C_nigoni | Caenorhabditis nigoni | C_nigoni | 2017-11-6 (GCA_002742825.1) | Cornell University/nigoni.pc_2016.07.14 | %36.16 | N/A | 2018-12-05 | 62.531% |
09 | C_sp26_LS_2015 | Caenorhabditis sp. 26 LS-2015 | C_sp26_LS_2015 | 2018-8-31 (GCA_900536285.1) | BANG/CZANZ_v1 | %32.77 | N/A | 2018-12-05 | 59.618% |
10 | caeSp51 | Caenorhabditis sp5 ju800 | C. sp. 5 ju800 | Jan. 2012 (WS230/Caenorhabditis_sp_5-JU800-1.0/caeSp51) | University of Edinburgh Caenorhabditis sp. 5 genome project | 2015-07-08 | 2015-07-08 | 2015-07-09 | 40.332% |
11 | C_sp40_LS_2015 | Caenorhabditis sp. 40 LS-2015 | C_sp40_LS_2015 | 2018-8-31 (GCA_900536305.1) | BANG/CTRIB_v1 | %24.65 | N/A | 2018-12-05 | 52.955% |
12 | C_latens | Caenorhabditis latens | C_latens | 2017-8-18 (GCA_002259235.1) | University of Oregon/CaeLat1.0 | %26.86 | N/A | 2018-12-05 | 57.873% |
13 | caeRem4 | Caenorhabditis remanei | C. remanei | Jul. 2007 (WS220/caeRem4) | Washington University School of Medicine GSC C. remanei 15.0.1 | 2011-05-25 | 2011-05-25 | 2018-10-25 | 61.020% |
14 | caePb3 | Caenorhabditis brenneri | C. brenneri | Nov. 2010 (C. brenneri 6.0.1b/caePb3) | The Caenorhabditis brenneri Sequencing and Analysis Consortium (GCA_000143925.2) | 2011-06-08 | 2011-06-08 | 2018-10-25 | 59.069% |
15 | caeSp111 | Caenorhabditis tropicalis | C. tropicalis | Nov. 2010 (WS226/WUSTL 3.0.1/caeSp111) | Washington University School of Medicine GSC Caenorhabditis sp. 9 JU1422 MAF-2010 3.0.1 (GCA_000186765.1) | 2011-05-31 | 2011-05-31 | 2018-10-25 | 55.203% |
16 | C_sp31_LS_2015 | Caenorhabditis sp. 31 LS-2015 | C_sp31_LS_2015 | 2018-8-31 (GCA_900536295.1) | BANG/CUTEL_v1 | %27.24 | N/A | 2018-12-05 | 41.026% |
17 | C_sp21_LS_2015 | Caenorhabditis sp. 21 LS-2015 | C_sp21_LS_2015 | 2018-8-31 (GCA_900536235.1) | BANG/CPARV_v1 | %30.49 | N/A | 2018-12-05 | 23.081% |
18 | C_sp32_LS_2015 | Caenorhabditis sp. 32 LS-2015 | C_sp32_LS_2015 | 2018-8-31 (GCA_900536325.1) | BANG/CSULS_v1 | %23.41 | N/A | 2018-12-05 | 38.533% |
19 | C_sp39_LS_2015 | Caenorhabditis sp. 39 LS-2015 | C_sp39_LS_2015 | 2018-8-31 (GCA_900536345.1) | BANG/CWAIT_v1 | %27.60 | N/A | 2018-12-05 | 44.315% |
20 | Pristionchus_arcanus | Pristionchus arcanus | Pristionchus_arcanus | 2018-6-30 (GCA_900490705.1) | MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY/P._arcanus_genome | %22.89 | N/A | 2018-12-05 | 13.074% |
21 | Pristionchus_exspectatus | Pristionchus exspectatus | Pristionchus_exspectatus | 2018-5-3 (GCA_900380275.1) | MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY/Pristionchus_exspectatus_de_novo_assembly | %22.17 | N/A | 2018-12-05 | 12.342% |
22 | priExs1 | Pristionchus exspectatus | P. exspectatus | Mar. 2014 (WS243/P_exspectatus_v1/priExs1) | Max Planck Institite for Developmental Genetics | 2015-07-14 | 2015-07-15 | 2015-07-23 | 6.222% |
23 | Pristionchus_pacificus | Pristionchus pacificus | Pristionchus_pacificus | 2017-10-10 (GCA_000180635.3) | Washington University (WashU)/El_Paco | %24.36 | N/A | 2018-12-05 | 12.987% |
24 | priPac3 | Pristionchus pacificus | P. pacificus | Aug. 2014 (WS221/P_pacificus-v2/priPac3) | Max Planck Institute for Developmental Biology P. pacificus genome project | 2015-07-01 | 2015-07-01 | 2015-07-01 | 6.308% |
25 | Pristionchus_maxplancki | Pristionchus maxplancki | Pristionchus_maxplancki | 2018-6-30 (GCA_900490775.1) | MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY/Prisstionchus_maxplancki_genome | %25.76 | N/A | 2018-12-05 | 12.880% |
26 | Pristionchus_entomophagus | Pristionchus entomophagus | Pristionchus_entomophagus | 2018-6-30 (GCA_900490825.1) | MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY/P._entomophagus_genome | %28.71 | N/A | 2018-12-05 | 12.602% |
27 | Bursaphelenchus_xylophilus | Bursaphelenchus xylophilus | Bursaphelenchus_xylophilus | 2011-10-13 (GCA_000231135.1) | Wellcome Trust Sanger insititute/ASM23113v1 | %28.29 | N/A | 2018-12-05 | 13.470% |
28 | burXyl1 | Bursaphelenchus xylophilus | Pine wood nematode | Nov. 2011 (WS229/B. xylophilus Ka4C1/burXyl1) | Wellcome Trust Sanger Institute B. xylophilus genome project | 2015-07-09 | 2015-07-09 | 2015-07-09 | 6.291% |
29 | Subanguina_moxae | Subanguina moxae | Subanguina_moxae | 2015-4-2 (GCA_000981365.1) | Faculty of medicine, University of Miyazaki/SAMX_assembly_v0.8 | %30.27 | N/A | 2018-12-05 | 11.549% |
30 | Oscheius_MCB | Oscheius sp. MCB | Oscheius_MCB | 2015-2-26 (GCA_000934875.1) | University of the Witwatersrand/ASM93487v1 | %24.16 | N/A | 2018-12-05 | 6.427% |
31 | Oscheius_TEL_2014 | Oscheius sp. TEL-2014 | Oscheius_TEL_2014 | 2016-1-12 (GCA_001513535.1) | University of the Witwatersrand/ASM151353v1 | %23.66 | N/A | 2018-12-05 | 15.278% |
32 | Angiostrongylus_cantonensis | Angiostrongylus cantonensis | Angiostrongylus_cantonensis | 2016-11-18 (GCA_001884285.1) | University of Malaya/ASM188428v1 | %27.52 | N/A | 2018-12-05 | 12.624% |
33 | Necator_americanus | Necator americanus | Necator_americanus | 2013-12-20 (GCF_000507365.1) | The Genome Institute at Washington University/N_americanus_v1 | %25.14 | N/A | 2018-12-05 | 15.754% |
34 | necAme1 | Necator americanus | N. americanus | Dec. 2013 (WS242/N_americanus_v1/necAme1) | The Genome Institute at Washington University | 2015-07-15 | 2015-07-15 | 2015-07-23 | 8.902% |
35 | Nippostrongylus_brasiliensis | Nippostrongylus brasiliensis | Nippostrongylus_brasiliensis | 2017-8-4 (GCA_900200055.1) | Malaghan Institute of Medical Research/NbL5_MIMR_Canu1.5 | %28.36 | N/A | 2018-12-05 | 15.792% |
36 | Ancylostoma_caninum | Ancylostoma caninum | Ancylostoma_caninum | 2018-7-21 (GCA_003336725.1) | The Genome Institute/A_caninum_9.3.2.ec.cg.pg | %22.71 | N/A | 2018-12-05 | 16.527% |
37 | Ancylostoma_duodenale | Ancylostoma duodenale | Ancylostoma_duodenale | 2015-1-16 (GCA_000816745.1) | The Genome Institute/A_duodenale_2.2.ec.cg.pg | %18.11 | N/A | 2018-12-05 | 15.004% |
38 | ancCey1 | Ancylostoma ceylanicum | A. ceylanicum | Mar. 2014 (WS243/Acey_2013.11.30.genDNA/ancCey1) | Cornell University Ancylostoma ceylanicum genome project | 2015-07-15 | 2015-07-15 | 2018-10-25 | 15.964% |
39 | Ascaris_suum | Ascaris suum | Ascaris_suum | 2017-11-6 (GCA_000187025.3) | Genetics and Genome Center, Washington University School of Medicine/ASM18702v3 | %21.25 | N/A | 2018-12-05 | 13.175% |
40 | ascSuu1 | Ascaris suum | Pig roundworm | Sep. 2012 (WS229/AscSuum_1.0/ascSuu1) | Beijing Genomics Institute | 2015-07-13 | 2015-07-14 | 2015-07-23 | 5.722% |
41 | Parascaris_univalens | Parascaris univalens | Parascaris_univalens | 2017-8-18 (GCA_002259215.1) | University of Colorado School of Medicine/ASM225921v1 | %17.11 | N/A | 2018-12-05 | 11.720% |
42 | Toxocara_canis | Toxocara canis | Toxocara_canis | 2014-12-18 (GCA_000803305.1) | University of Melbourne/Toxocara_canis_adult_r1.0 | %18.23 | N/A | 2018-12-05 | 11.502% |
43 | Oesophagostomum_dentatum | Oesophagostomum dentatum | Oesophagostomum_dentatum | 2014-12-15 (GCA_000797555.1) | The Genome Institute/O_dentatum_10.0.ec.cg.pg | %22.59 | N/A | 2018-12-05 | 14.994% |
44 | Haemonchus_contortus | Haemonchus contortus | Haemonchus_contortus | 2013-8-27 (GCA_000469685.1) | SC/HCON | %18.20 | N/A | 2018-12-05 | 14.406% |
45 | haeCon2 | Haemonchus contortus | Barber pole worm | Jul. 2013 (WormBase WS239/haeCon2) | Sanger Institute | 2015-07-02 | 2015-07-06 | 2015-07-07 | 8.936% |
46 | Teladorsagia_circumcincta | Teladorsagia circumcincta | Teladorsagia_circumcincta | 2017-9-20 (GCA_002352805.1) | The Genome Institute/T_circumcincta.14.0.ec.cg.pg | %26.07 | N/A | 2018-12-05 | 14.484% |
47 | Clonorchis_sinensis | Clonorchis sinensis | Clonorchis_sinensis | 2011-11-28 (GCA_000236345.1) | Department of Parasitology, Zhongshan School of Medicine, Sun Yat-sen University/C_sinensis-2.0 | %18.09 | N/A | 2018-12-05 | 3.450% |
48 | Opisthorchis_viverrini | Opisthorchis viverrini | Opisthorchis_viverrini | 2014-7-9 (GCA_000715545.1) | The University of Melbourne/OpiViv1.0 | %17.53 | N/A | 2018-12-05 | 3.444% |
49 | Dicrocoelium_dendriticum | Dicrocoelium dendriticum | Dicrocoelium_dendriticum | 2014-9-24 (GCA_000950715.1) | WTSI/D_dendriticum_Leon_v1_0_4 | %15.14 | N/A | 2018-12-05 | 0.832% |
50 | Elaeophora_elaphi | Elaeophora elaphi | Elaeophora_elaphi | 2013-11-8 (GCA_000499685.1) | SC/EEL001 | %0.88 | N/A | 2018-12-05 | 0.158% |
51 | Macrostomum_lignano | Macrostomum lignano | Macrostomum_lignano | 2017-8-24 (GCA_002269645.1) | University Medical Center Groningen/Mlig_3_7 | %29.86 | N/A | 2018-12-05 | 13.379% |
52 | Fasciola_gigantica | Fasciola gigantica | Fasciola_gigantica | 2018-1-8 (GCA_002867515.1) | North-Eastern Hill University/ASM286751v1 | %18.71 | N/A | 2018-12-05 | 3.502% |
53 | Fasciola_hepatica | Fasciola hepatica | Fasciola_hepatica | 2018-4-21 (GCA_900302435.1) | LIV/Fasciola_10x_pilon | %23.13 | N/A | 2018-12-05 | 4.266% |
54 | Spirometra_erinaceieuropaei | Spirometra erinaceieuropaei | Spirometra_erinaceieuropaei | 2014-9-26 (GCA_000951995.1) | WTSI/S_erinaceieuropaei | %26.08 | N/A | 2018-12-05 | 2.894% |
55 | Heligmosomoides_polygyrus_bakeri | Heligmosomoides polygyrus bakeri | Heligmosomoides_polygyrus_bakeri | 2016-9-19 (GCA_900096555.1) | BANG/nHp_v2.0 | %36.47 | N/A | 2018-12-05 | 14.696% |
56 | Oscheius_tipulae | Oscheius tipulae | Oscheius_tipulae | 2017-5-22 (GCA_900184235.1) | BANG/Oscheius_tipulae_assembly_v2 | %12.36 | N/A | 2018-12-05 | 16.438% |
57 | Steinernema_carpocapsae | Steinernema carpocapsae | Steinernema_carpocapsae | 2014-9-24 (GCA_000757645.1) | California Institute of Technology/S_carpo_v1 | %14.24 | N/A | 2018-12-05 | 12.640% |
58 | Steinernema_scapterisci | Steinernema scapterisci | Steinernema_scapterisci | 2014-9-24 (GCA_000757745.1) | California Institute of Technology/S_scapt_v1 | %8.86 | N/A | 2018-12-05 | 11.987% |
59 | Steinernema_feltiae | Steinernema feltiae | Steinernema_feltiae | 2014-9-24 (GCA_000757705.1) | California Institute of Technology/S_felt_v1 | %10.79 | N/A | 2018-12-05 | 11.885% |
60 | Steinernema_glaseri | Steinernema glaseri | Steinernema_glaseri | 2014-9-24 (GCA_000757755.1) | California Institute of Technology/S_glas_v1 | %9.46 | N/A | 2018-12-05 | 10.278% |
61 | Echinococcus_canadensis | Echinococcus canadensis | Echinococcus_canadensis | 2016-5-29 (GCA_900004735.1) | IMPAM-UBA-CONICET/ECANG7 | %10.95 | N/A | 2018-12-05 | 3.383% |
62 | Echinococcus_granulosus | Echinococcus granulosus | Echinococcus_granulosus | 2014-1-28 (GCA_000524195.1) | Chinese National Human Genome Center at Shanghai/ASM52419v1 | %11.98 | N/A | 2018-12-05 | 3.234% |
63 | Echinococcus_multilocularis | Echinococcus multilocularis | Echinococcus_multilocularis | 2015-12-10 (GCA_000469725.3) | WTSI/EMULTI002 | %11.00 | N/A | 2018-12-05 | 3.403% |
64 | Taenia_asiatica | Taenia asiatica | Taenia_asiatica | 2016-9-2 (GCA_001693035.2) | Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences/Taenia_asiatica_TASYD01_v1 | %10.32 | N/A | 2018-12-05 | 3.396% |
65 | Taenia_saginata | Taenia saginata | Taenia_saginata | 2016-10-23 (GCA_001693075.2) | Beijing Institute of Genomics, Chinese Academy of Science/ASM169307v2 | %10.25 | N/A | 2018-12-05 | 3.457% |
66 | Taenia_multiceps | Taenia multiceps | Taenia_multiceps | 2018-7-17 (GCA_001923025.2) | Agricultural Genomics Institute at Shenzhen Chinese Academy of Agricultural Sciences/T_multiceps_v2.0 | %19.60 | N/A | 2018-12-05 | 3.712% |
67 | Taenia_solium | Taenia solium | Taenia_solium | 2016-11-7 (GCA_001870725.1) | Taenia solium Genome Consortium/MEX_genome_complete.1-6-13 | %10.30 | N/A | 2018-12-05 | 3.268% |
68 | Trichuris_muris | Trichuris muris | Trichuris_muris | 2014-3-26 (GCA_000612645.1) | WTSI/TMUE2.2 | %16.59 | N/A | 2018-12-05 | 5.651% |
69 | Trichuris_trichiura | Trichuris trichiura | Trichuris_trichiura | 2014-3-26 (GCA_000613005.1) | SC/TTRE2.1 | %14.38 | N/A | 2018-12-05 | 6.137% |
70 | triSui1 | Trichuris suis | Whipworm | Jul. 2014 (WS243/T. suis DCEP-RM93M male/triSui1) | University of Melboure T. suis (male) genome project | 2015-07-10 | 2015-07-15 | 2015-07-23 | 2.917% |
71 | Plectus_sambesii | Plectus sambesii | Plectus_sambesii | 2017-11-28 (GCA_002796945.1) | MRC London Institute of Medical Sciences - Imperial College London/Psam_v1.0 | %15.71 | N/A | 2018-12-05 | 11.406% |
72 | Steinernema_monticolum | Steinernema monticolum | Steinernema_monticolum | 2013-12-12 (GCA_000505645.1) | California Institute of Technology/S_monti_v1 | %14.69 | N/A | 2018-12-05 | 12.825% |
73 | panRed1 | Panagrellus redivivus | Microworm | Feb. 2013 (WS240/Pred3/panRed1) | California Institute of Technology P. redivivus genome project | 2015-07-01 | 2015-07-01 | 2015-07-01 | 6.585% |
74 | Diploscapter_coronatus | Diploscapter coronatus | Diploscapter_coronatus | 2017-6-12 (GCA_002207785.1) | NIG/ASM220778v1 | %26.50 | N/A | 2018-12-05 | 24.970% |
75 | Diploscapter_pachys | Diploscapter pachys | Diploscapter_pachys | 2017-9-7 (GCA_002287525.1) | New York University/DipSp1Ass11Ann3 | %26.28 | N/A | 2018-12-05 | 23.687% |
76 | Brugia_malayi | Brugia malayi | Brugia_malayi | 2008-3-4 (GCF_000002995.3) | TIGR/ASM299v2 | %34.60 | N/A | 2018-12-05 | 16.763% |
77 | bruMal2 | Brugia malayi | Filarial worm | May. 2014 (WS244/B_malayi-3.1/bruMal2) | University of Pittsburgh B. malayi genome project | 2015-08-11 | 2015-08-11 | 2015-08-11 | 5.065% |
78 | Brugia_pahangi | Brugia pahangi | Brugia_pahangi | 2015-9-10 (GCA_001280985.1) | University Malaya/Brugia_pa_1.0 | %39.53 | N/A | 2018-12-05 | 19.944% |
79 | Wuchereria_bancrofti | Wuchereria bancrofti | Wuchereria_bancrofti | 2016-2-9 (GCA_001555675.1) | Case Western Reserve University/Wb_PNG_Genome_assembly_pt22 | %36.74 | N/A | 2018-12-05 | 20.673% |
80 | Dirofilaria_immitis | Dirofilaria immitis | Dirofilaria_immitis | 2013-8-23 (GCA_001077395.1) | EDINBURGH/ASM107739v1 | %37.45 | N/A | 2018-12-05 | 20.305% |
81 | dirImm1 | Dirofilaria immitis | Dog heartworm | Sep. 2013 (WS240/D. immitis v2.2/dirImm1) | Edinburgh University D. immitis genome project | 2015-07-09 | 2015-07-09 | 2015-07-23 | 5.005% |
82 | Onchocerca_ochengi | Onchocerca ochengi | Onchocerca_ochengi | 2016-3-4 (GCA_000950515.2) | WTSI/O_ochengi_Ngaoundere | %34.19 | N/A | 2018-12-05 | 19.777% |
83 | Onchocerca_volvulus | Onchocerca volvulus | Onchocerca_volvulus | 2014-2-28 (GCA_000499405.2) | SC/ASM49940v2 | %35.72 | N/A | 2018-12-05 | 25.170% |
84 | oncVol1 | Onchocerca volvulus | O. volvulus | Nov. 2013 (WS241/O_volvulus_Cameroon_v3/oncVol1) | Wellcome Trust Sanger Institute O. volvulus genome project | 2015-08-10 | 2015-08-10 | 2015-08-10 | 5.193% |
85 | Loa_loa | Loa loa | Loa_loa | 2012-7-6 (GCF_000183805.2) | Broad Institute/Loa_loa_V3.1 | %30.83 | N/A | 2018-12-05 | 16.698% |
86 | loaLoa1 | Loa loa | Eye worm | Jul. 2012 (WS235/L_loa_Cameroon_isolate/loaLoa1) | Broad Institute L. loa genome project | 2015-07-10 | 2015-07-15 | 2015-07-23 | 5.056% |
87 | Setaria_digitata | Setaria digitata | Setaria_digitata | 2018-1-2 (GCA_900083525.1) | SVERIGES LANTBRUKSUNIVERSITET/Sdigitata | %30.01 | N/A | 2018-12-05 | 16.319% |
88 | Setaria_equina | Setaria equina | Setaria_equina | 2018-3-20 (GCA_003012265.1) | Beni-Suef University/Setequ3.0 | %33.31 | N/A | 2018-12-05 | 14.600% |
89 | Onchocerca_flexuosa | Onchocerca flexuosa | Onchocerca_flexuosa | 2017-8-9 (GCA_002249935.1) | The Genome Institute/O_flexuosa_1.0.allpaths.pg.lrna | %32.14 | N/A | 2018-12-05 | 15.520% |
90 | Dugesia_japonica | Dugesia japonica | Dugesia_japonica | 2017-1-6 (GCA_001938525.1) | University of Oxford/Djap_assembly_v1 | %51.27 | N/A | 2018-12-05 | 17.785% |
91 | Girardia_tigrina | Girardia tigrina | Girardia_tigrina | 2017-1-6 (GCA_001938485.1) | University of Oxford/gtig.1 | %51.16 | N/A | 2018-12-05 | 37.989% |
92 | Schmidtea_mediterranea | Schmidtea mediterranea | Schmidtea_mediterranea | 2017-10-18 (GCA_002600895.1) | Max Planck Institute of Molecular Cell Biology and Genetics/ASM260089v1 | %54.04 | N/A | 2018-12-05 | 39.093% |
93 | Meloidogyne_arenaria | Meloidogyne arenaria | Meloidogyne_arenaria | 2018-5-18 (GCA_003133805.1) | RIKEN/ASM313380v1 | %48.48 | N/A | 2018-12-05 | 31.303% |
94 | Meloidogyne_javanica | Meloidogyne javanica | Meloidogyne_javanica | 2017-4-29 (GCA_900003945.1) | Genoscope CEA/ASM90000394v1 | %47.83 | N/A | 2018-12-05 | 26.293% |
95 | Meloidogyne_incognita | Meloidogyne incognita | Meloidogyne_incognita | 2017-5-5 (GCA_900182535.1) | Genoscope CEA/Meloidogyne_incognita_V3 | %47.89 | N/A | 2018-12-05 | 26.760% |
96 | Meloidogyne_floridensis | Meloidogyne floridensis | Meloidogyne_floridensis | 2014-6-13 (GCA_000751915.1) | BANG/nMf_1_1 | %45.57 | N/A | 2018-12-05 | 12.683% |
97 | melInc2 | Meloidogyne incognita | M. incognita | Feb. 2008 (M. incognita WS245/PRJEA28837/melInc2) | Sanger and Genoscope | 2015-06-30 | 2015-06-30 | 2015-06-30 | 3.516% |
98 | Meloidogyne_graminicola | Meloidogyne graminicola | Meloidogyne_graminicola | 2017-11-16 (GCA_002778205.1) | ICAR-IARI, New Delhi, INDIA/Mgraminicola_V1 | %56.64 | N/A | 2018-12-05 | 17.004% |
99 | melHap1 | Meloidogyne hapla | M. hapla | Sep. 2008 (M. hapla VW9 WS210/melHap1) | The Center for the Biology of Nematode Parasitism, N.C. State | 2010-09-21 | 2010-09-21 | 2015-06-26 | 3.916% |
100 | Parastrongyloides_trichosuri | Parastrongyloides trichosuri | Parastrongyloides_trichosuri | 2014-9-26 (GCA_000941615.1) | SC/P_trichosuri_KNP | %42.20 | N/A | 2018-12-05 | 28.310% |
101 | Strongyloides_papillosus | Strongyloides papillosus | Strongyloides_papillosus | 2014-11-13 (GCA_000936265.1) | SC/S_papillosus_LIN | %43.56 | N/A | 2018-12-05 | 31.051% |
102 | Strongyloides_venezuelensis | Strongyloides venezuelensis | Strongyloides_venezuelensis | 2015-6-2 (GCA_001028725.1) | SC/S_venezuelensis_HH1 | %44.12 | N/A | 2018-12-05 | 31.839% |
103 | Strongyloides_stercoralis | Strongyloides stercoralis | Strongyloides_stercoralis | 2014-11-13 (GCA_000947215.1) | SC/S_stercoralis_PV0001 | %51.71 | N/A | 2018-12-05 | 35.984% |
104 | strRat2 | Strongyloides ratti | Threadworm | Sep. 2014 (S. ratti ED321/strRat2) | Wellcome Trust Sanger Institute S. ratti genome project | 2015-07-08 | 2015-07-08 | 2018-10-25 | 36.164% |
105 | Schistosoma_haematobium | Schistosoma haematobium | Schistosoma_haematobium | 2014-6-9 (GCA_000699445.1) | The University of Melbourne/SchHae_1.0 | %32.39 | N/A | 2018-12-05 | 9.723% |
106 | Schistosoma_mansoni | Schistosoma mansoni | Schistosoma_mansoni | 2011-12-13 (GCA_000237925.2) | Schistosoma Genome Network/ASM23792v2 | %35.65 | N/A | 2018-12-05 | 10.328% |
107 | Schistosoma_japonicum | Schistosoma japonicum | Schistosoma_japonicum | 2009-4-21 (GCA_000151775.1) | Chinese Human Genome Center at Shanghai/ASM15177v1 | %27.72 | N/A | 2018-12-05 | 7.825% |
108 | Dictyocaulus_viviparus | Dictyocaulus viviparus | Dictyocaulus_viviparus | 2015-3-12 (GCA_000816705.1) | The Genome Institute/D_viviparus_9.2.1.ec.pg | %24.22 | N/A | 2018-12-05 | 17.480% |
109 | Hymenolepis_microstoma | Hymenolepis microstoma | Hymenolepis_microstoma | 2015-12-11 (GCA_000469805.2) | WTSI/HMIC002 | %20.27 | N/A | 2018-12-05 | 5.601% |
110 | Rhabditophanes_KR3021 | Rhabditophanes sp. KR3021 | Rhabditophanes_KR3021 | 2014-9-24 (GCA_000944355.1) | WTSI/Rhabditophanes_sp_KR3021 | %25.63 | N/A | 2018-12-05 | 18.703% |
111 | ci3 | Ciona intestinalis | C. intestinalis | Apr. 2011 (Kyoto KH/ci3) | Kyoto KH | 2015-08-06 | 2015-08-06 | 2017-03-21 | 2.006% |
112 | hetBac1 | Heterorhabditis bacteriophora | H. bacteriophora/m31e | Aug. 2011 (WS229/H. bacteriophora 7.0/hetBac1) | Washington University Genome Sequencing Center Heterorhabditis_bacteriophora-7.0 | 2015-07-14 | 2015-07-15 | 2015-07-23 | 10.486% |
113 | Gyrodactylus_salaris | Gyrodactylus salaris | Gyrodactylus_salaris | 2014-6-27 (GCA_000715275.1) | Natural History Museum, University of Oslo/Gsalaris_v1 | %28.46 | N/A | 2018-12-05 | 6.686% |
114 | Parapristionchus_giblindavisi | Parapristionchus giblindavisi | Parapristionchus_giblindavisi | 2018-6-30 (GCA_900491355.1) | MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY/Parapristionchus_genome | %34.34 | N/A | 2018-12-05 | 15.865% |
115 | Ditylenchus_destructor | Ditylenchus destructor | Ditylenchus_destructor | 2016-3-3 (GCA_001579705.1) | Huazhong Agricultural University/ASM157970v1 | %27.66 | N/A | 2018-12-05 | 14.413% |
116 | Trichinella_T6 | Trichinella sp. T6 | Trichinella_T6 | 2015-11-24 (GCA_001447435.1) | University of Melbourne/T6_ISS34_r1.0 | %33.49 | N/A | 2018-12-05 | 11.008% |
117 | Trichinella_patagoniensis | Trichinella patagoniensis | Trichinella_patagoniensis | 2015-11-24 (GCA_001447655.1) | University of Melbourne/T12_ISS2496_r1.0 | %33.36 | N/A | 2018-12-05 | 10.836% |
118 | Trichinella_T8 | Trichinella sp. T8 | Trichinella_T8 | 2015-11-24 (GCA_001447745.1) | University of Melbourne/T8_ISS272_r1.0 | %33.13 | N/A | 2018-12-05 | 10.902% |
119 | Trichinella_T9 | Trichinella sp. T9 | Trichinella_T9 | 2015-11-24 (GCA_001447505.1) | University of Melbourne/T9_ISS409_r1.0 | %33.36 | N/A | 2018-12-05 | 10.885% |
120 | Trichinella_britovi | Trichinella britovi | Trichinella_britovi | 2015-11-24 (GCA_001447585.1) | University of Melbourne/T3_ISS120_r1.0 | %33.15 | N/A | 2018-12-05 | 10.944% |
121 | Trichinella_murrelli | Trichinella murrelli | Trichinella_murrelli | 2017-7-26 (GCA_002221485.1) | USDA-ARS/ASM222148v1 | %35.45 | N/A | 2018-12-05 | 11.930% |
122 | Trichinella_nativa | Trichinella nativa | Trichinella_nativa | 2015-11-24 (GCA_001447565.1) | University of Melbourne/T2_ISS10_r1.0 | %33.48 | N/A | 2018-12-05 | 10.699% |
123 | Trichinella_nelsoni | Trichinella nelsoni | Trichinella_nelsoni | 2015-11-24 (GCA_001447455.1) | University of Melbourne/T7_ISS37_r1.0 | %33.40 | N/A | 2018-12-05 | 10.754% |
124 | Trichinella_spiralis | [ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/795/GCF_000181795v1_Trichinella_spiralis-3.7.1/ Trichinella spiralis Trichinella spiralis] | Trichinella_spiralis | 2011-1-11 (GCF_000181795.1) | Washington University School of Medicine/Trichinella_spiralis-3.7.1 | %32.77 | N/A | 2018-12-05 | 10.697% |
125 | triSpi1 | Trichinella spiralis | Trichinella | Jan. 2011 (WS225/Trichinella_spiralis-3.7.1/triSpi1) | WashU School of Medicine T. spiralis genome project | 2015-07-10 | 2015-07-15 | 2015-07-23 | 2.848% |
126 | Trichinella_papuae | Trichinella papuae | Trichinella_papuae | 2015-11-24 (GCA_001447755.1) | University of Melbourne/T10_ISS1980_r1.0 | %34.96 | N/A | 2018-12-05 | 11.415% |
127 | Trichinella_zimbabwensis | Trichinella zimbabwensis | Trichinella_zimbabwensis | 2015-11-24 (GCA_001447665.1) | University of Melbourne/T11_ISS1029_r1.0 | %35.19 | N/A | 2018-12-05 | 11.705% |
128 | Trichinella_pseudospiralis | Trichinella pseudospiralis | Trichinella_pseudospiralis | 2015-11-24 (GCA_001447725.1) | University of Melbourne/T4_ISS588_r1.0 | %35.44 | N/A | 2018-12-05 | 11.462% |
129 | Romanomermis_culicivorax | Romanomermis culicivorax | Romanomermis_culicivorax | 2014-1-8 (GCA_001039655.1) | UZK/nRc.2.0 | %34.63 | N/A | 2018-12-05 | 8.805% |
130 | Globodera_ellingtonae | Globodera ellingtonae | Globodera_ellingtonae | 2016-9-12 (GCA_001723225.1) | Oregon State University/ASM172322v1 | %39.16 | N/A | 2018-12-05 | 11.318% |
131 | Globodera_rostochiensis | Globodera rostochiensis | Globodera_rostochiensis | 2016-4-21 (GCA_900079975.1) | BANG/nGr | %37.01 | N/A | 2018-12-05 | 10.968% |
132 | Globodera_pallida | Globodera pallida | Globodera_pallida | 2014-5-30 (GCA_000724045.1) | WTSI/GPAL001 | %38.92 | N/A | 2018-12-05 | 10.269% |
133 | Heterodera_glycines | Heterodera glycines | Heterodera_glycines | 2008-4-1 (GCA_000150805.1) | Monsanto/HG2 | %38.68 | N/A | 2018-12-05 | 7.254% |
134 | Rotylenchulus_reniformis | Rotylenchulus reniformis | Rotylenchulus_reniformis | 2015-6-12 (GCA_001026735.1) | Mississippi State University/RREN1.0 | %43.54 | N/A | 2018-12-05 | 16.345% |
135 | Acrobeloides_nanus | Acrobeloides nanus | Acrobeloides_nanus | 2018-6-9 (GCA_900406225.1) | UNIVERSITY COLLEGE LONDON/v1 | %48.16 | N/A | 2018-12-05 | 23.468% |